Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabiH97|062960
Gene name
Locationscaffold_3:2475216..2475906
Strand-
Gene length (bp)690
Transcript length (bp)690
Coding sequence length (bp)690
Protein length (aa) 230

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF13649 Methyltransf_25 Methyltransferase domain 2.1E-06 8 81
PF08241 Methyltransf_11 Methyltransferase domain 2.7E-05 10 83

Swissprot hits

(None)

GO

GO Term Description Terminal node
GO:0008168 methyltransferase activity Yes
GO:0003674 molecular_function No
GO:0016741 transferase activity, transferring one-carbon groups No
GO:0016740 transferase activity No
GO:0003824 catalytic activity No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 27 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Developmental stages of Agaricus bisporus (strain A15). Published in Pelkmans et al, Applied Microbiology and Biotechnology, 2016

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >AgabiH97|062960
MAKVTSTKPQFIGIDIESNFFPRASTLPVNIRFEIQTVLDLPKEWTNKFTLVHQRLLISGLRRHEWEPAVKELYR
VVKPGGWIQMFEMRIWTAGPALAKYWDLLCKFGDDAGLMFRDLAIKLPGFLKQSGFVDIHEDTFGTPLGAWANRD
GVDGKEDILGILQGFKTPILRGGGYGVVGSEAEYDGLLQEISKEVDMTPGSTALWTTFWARKPSANEWDRTNHYN
VYEH*
Coding >AgabiH97|062960
ATGGCTAAAGTAACATCCACGAAACCACAATTCATCGGCATAGATATCGAATCAAATTTCTTCCCACGAGCATCA
ACCCTCCCCGTGAACATTAGATTCGAGATCCAAACCGTCCTCGATCTTCCCAAGGAATGGACAAACAAGTTCACA
CTGGTTCATCAGCGTCTTCTCATCTCGGGTCTCCGCAGACATGAATGGGAACCAGCTGTCAAAGAGCTATATCGA
GTCGTCAAACCAGGTGGATGGATTCAAATGTTCGAAATGCGAATATGGACTGCTGGTCCAGCCCTTGCCAAATAT
TGGGATTTGCTTTGCAAGTTCGGGGATGATGCAGGGTTGATGTTTCGCGACCTCGCCATCAAACTACCGGGTTTT
CTCAAGCAAAGTGGCTTTGTTGATATTCATGAGGACACTTTTGGTACCCCTCTTGGTGCTTGGGCAAATCGGGAC
GGTGTTGATGGCAAAGAGGATATTTTGGGTATTTTGCAAGGATTTAAGACACCGATATTGAGAGGAGGCGGATAT
GGTGTGGTGGGAAGTGAAGCGGAATACGATGGACTACTGCAGGAGATTTCGAAGGAAGTGGATATGACGCCTGGA
TCGACGGCTTTGTGGACGACGTTCTGGGCACGAAAACCATCTGCCAATGAGTGGGATCGTACTAATCATTACAAT
GTATATGAACATTAG
Transcript >AgabiH97|062960
ATGGCTAAAGTAACATCCACGAAACCACAATTCATCGGCATAGATATCGAATCAAATTTCTTCCCACGAGCATCA
ACCCTCCCCGTGAACATTAGATTCGAGATCCAAACCGTCCTCGATCTTCCCAAGGAATGGACAAACAAGTTCACA
CTGGTTCATCAGCGTCTTCTCATCTCGGGTCTCCGCAGACATGAATGGGAACCAGCTGTCAAAGAGCTATATCGA
GTCGTCAAACCAGGTGGATGGATTCAAATGTTCGAAATGCGAATATGGACTGCTGGTCCAGCCCTTGCCAAATAT
TGGGATTTGCTTTGCAAGTTCGGGGATGATGCAGGGTTGATGTTTCGCGACCTCGCCATCAAACTACCGGGTTTT
CTCAAGCAAAGTGGCTTTGTTGATATTCATGAGGACACTTTTGGTACCCCTCTTGGTGCTTGGGCAAATCGGGAC
GGTGTTGATGGCAAAGAGGATATTTTGGGTATTTTGCAAGGATTTAAGACACCGATATTGAGAGGAGGCGGATAT
GGTGTGGTGGGAAGTGAAGCGGAATACGATGGACTACTGCAGGAGATTTCGAAGGAAGTGGATATGACGCCTGGA
TCGACGGCTTTGTGGACGACGTTCTGGGCACGAAAACCATCTGCCAATGAGTGGGATCGTACTAATCATTACAAT
GTATATGAACATTAG
Gene >AgabiH97|062960
ATGGCTAAAGTAACATCCACGAAACCACAATTCATCGGCATAGATATCGAATCAAATTTCTTCCCACGAGCATCA
ACCCTCCCCGTGAACATTAGATTCGAGATCCAAACCGTCCTCGATCTTCCCAAGGAATGGACAAACAAGTTCACA
CTGGTTCATCAGCGTCTTCTCATCTCGGGTCTCCGCAGACATGAATGGGAACCAGCTGTCAAAGAGCTATATCGA
GTCGTCAAACCAGGTGGATGGATTCAAATGTTCGAAATGCGAATATGGACTGCTGGTCCAGCCCTTGCCAAATAT
TGGGATTTGCTTTGCAAGTTCGGGGATGATGCAGGGTTGATGTTTCGCGACCTCGCCATCAAACTACCGGGTTTT
CTCAAGCAAAGTGGCTTTGTTGATATTCATGAGGACACTTTTGGTACCCCTCTTGGTGCTTGGGCAAATCGGGAC
GGTGTTGATGGCAAAGAGGATATTTTGGGTATTTTGCAAGGATTTAAGACACCGATATTGAGAGGAGGCGGATAT
GGTGTGGTGGGAAGTGAAGCGGAATACGATGGACTACTGCAGGAGATTTCGAAGGAAGTGGATATGACGCCTGGA
TCGACGGCTTTGTGGACGACGTTCTGGGCACGAAAACCATCTGCCAATGAGTGGGATCGTACTAATCATTACAAT
GTATATGAACATTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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