Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabiH97|062930
Gene name
Locationscaffold_3:2469919..2470899
Strand+
Gene length (bp)980
Transcript length (bp)873
Coding sequence length (bp)873
Protein length (aa) 291

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF13649 Methyltransf_25 Methyltransferase domain 5.1E-12 62 156
PF13489 Methyltransf_23 Methyltransferase domain 6.5E-10 52 162
PF08241 Methyltransf_11 Methyltransferase domain 3.4E-08 63 158
PF13847 Methyltransf_31 Methyltransferase domain 2.1E-07 60 169
PF01209 Ubie_methyltran ubiE/COQ5 methyltransferase family 1.6E-05 57 166

Swissprot hits

(None)

GO

GO Term Description Terminal node
GO:0008168 methyltransferase activity Yes
GO:0003674 molecular_function No
GO:0016741 transferase activity, transferring one-carbon groups No
GO:0016740 transferase activity No
GO:0003824 catalytic activity No

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Cytoplasm|Nucleus Nuclear localization signal 0.6874 0.569 0.0369 0.0464 0.0848 0.0131 0.1974 0.1802 0.1575 0.0082

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

Analysis 1: Developmental stages of Agaricus bisporus (strain A15). Published in Pelkmans et al, Applied Microbiology and Biotechnology, 2016

Click here for more information

Orthologs

Orthofinder run ID1
Orthogroup288
Change Orthofinder run
Species Protein ID
Agaricus bisporus var bisporus H39 AgabiH39|023670
Agaricus bisporus var bisporus H39 AgabiH39|030510
Agaricus bisporus var bisporus H39 AgabiH39|062930
Agaricus bisporus var bisporus H39 AgabiH39|062940
Agaricus bisporus var bisporus H39 AgabiH39|062950
Agaricus bisporus var bisporus H39 AgabiH39|062970
Agaricus bisporus var bisporus H39 AgabiH39|062990
Agaricus bisporus var bisporus H39 AgabiH39|069420
Agaricus bisporus var bisporus H39 AgabiH39|294900
Agaricus bisporus var bisporus H39 AgabiH39|387000
Agaricus bisporus var bisporus H97 AgabiH97|069430
Agaricus bisporus var bisporus H97 AgabiH97|069420
Agaricus bisporus var bisporus H97 AgabiH97|062990
Agaricus bisporus var bisporus H97 AgabiH97|062970
Agaricus bisporus var bisporus H97 AgabiH97|062960
Agaricus bisporus var bisporus H97 AgabiH97|023670
Agaricus bisporus var bisporus H97 AgabiH97|062940
Agaricus bisporus var bisporus H97 AgabiH97|062930 (this protein)
Agaricus bisporus var bisporus H97 AgabiH97|030510
Agaricus bisporus var bisporus H97 AgabiH97|096710
Agaricus bisporus var bisporus H97 AgabiH97|062950
Rhodonia placenta FPRL280 RhoplFPRL280|71_4

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >AgabiH97|062930
MSDIRNTVTRTSNYTKADGTVDILAHDTEERLRLELQHGIFLRAFDSQVLHAPVKLKDDDWILDVGTGTGIWLQD
LVKEVSTKPQFLGVDINSSFFPQPSTLPKNISFETQSVLDLPEEWTDKFTLINQRLLISSLRKHEWGQALREIYR
TLKPGGWVQLFELRTWTSGLALAKQLDLFYRFSDDIGMMHRDITVRLPDFLKQSDFVNIHEDTRSSPLGAWANQD
GIDGKNNLMGVLRFLKAPVLRGGGYGIIESEAEYDELVEEISKELDMTPGSEAVWSMFWAQKPVQ*
Coding >AgabiH97|062930
ATGTCGGATATTCGAAACACAGTAACGCGTACCAGTAACTACACCAAAGCTGATGGCACGGTGGACATTTTGGCA
CATGATACGGAAGAACGTTTGAGATTGGAATTGCAGCATGGTATATTCCTCCGTGCATTCGATAGCCAAGTTCTC
CATGCGCCAGTCAAACTCAAAGATGATGACTGGATCTTGGATGTAGGTACTGGCACAGGTATCTGGCTTCAAGAT
TTAGTCAAAGAGGTTTCCACAAAACCTCAATTTCTCGGTGTAGACATCAACTCAAGTTTCTTCCCACAACCGTCT
ACTCTTCCCAAAAACATATCATTCGAGACTCAATCCGTCCTCGATCTTCCCGAAGAATGGACCGACAAATTCACA
CTTATCAATCAGCGTCTCCTCATCTCGAGCCTTCGTAAACATGAATGGGGACAAGCTCTAAGAGAGATCTACCGA
ACTCTCAAACCAGGTGGATGGGTTCAATTGTTCGAGTTGCGAACATGGACTTCTGGTCTGGCTCTTGCAAAACAG
CTAGATTTGTTTTACAGGTTTTCAGATGACATAGGAATGATGCATCGCGACATCACCGTACGACTGCCAGATTTT
CTCAAGCAGAGTGACTTTGTGAATATTCATGAGGATACTCGTAGTAGTCCTCTTGGTGCTTGGGCAAATCAAGAT
GGTATTGATGGGAAAAATAATCTTATGGGTGTTTTACGGTTTCTCAAGGCACCGGTATTGAGAGGAGGTGGGTAT
GGTATAATAGAGAGCGAAGCTGAGTACGATGAATTAGTGGAAGAGATTTCGAAGGAACTGGATATGACACCCGGA
TCGGAGGCAGTATGGTCAATGTTCTGGGCACAGAAACCGGTTCAGTAA
Transcript >AgabiH97|062930
ATGTCGGATATTCGAAACACAGTAACGCGTACCAGTAACTACACCAAAGCTGATGGCACGGTGGACATTTTGGCA
CATGATACGGAAGAACGTTTGAGATTGGAATTGCAGCATGGTATATTCCTCCGTGCATTCGATAGCCAAGTTCTC
CATGCGCCAGTCAAACTCAAAGATGATGACTGGATCTTGGATGTAGGTACTGGCACAGGTATCTGGCTTCAAGAT
TTAGTCAAAGAGGTTTCCACAAAACCTCAATTTCTCGGTGTAGACATCAACTCAAGTTTCTTCCCACAACCGTCT
ACTCTTCCCAAAAACATATCATTCGAGACTCAATCCGTCCTCGATCTTCCCGAAGAATGGACCGACAAATTCACA
CTTATCAATCAGCGTCTCCTCATCTCGAGCCTTCGTAAACATGAATGGGGACAAGCTCTAAGAGAGATCTACCGA
ACTCTCAAACCAGGTGGATGGGTTCAATTGTTCGAGTTGCGAACATGGACTTCTGGTCTGGCTCTTGCAAAACAG
CTAGATTTGTTTTACAGGTTTTCAGATGACATAGGAATGATGCATCGCGACATCACCGTACGACTGCCAGATTTT
CTCAAGCAGAGTGACTTTGTGAATATTCATGAGGATACTCGTAGTAGTCCTCTTGGTGCTTGGGCAAATCAAGAT
GGTATTGATGGGAAAAATAATCTTATGGGTGTTTTACGGTTTCTCAAGGCACCGGTATTGAGAGGAGGTGGGTAT
GGTATAATAGAGAGCGAAGCTGAGTACGATGAATTAGTGGAAGAGATTTCGAAGGAACTGGATATGACACCCGGA
TCGGAGGCAGTATGGTCAATGTTCTGGGCACAGAAACCGGTTCAGTAA
Gene >AgabiH97|062930
ATGTCGGATATTCGAAACACAGTAACGCGTACCAGTAACTACACCAAAGCTGATGGCACGGTGGACATTTTGGCA
CATGATACGGAAGAACGTTTGAGGTGAGGTTTCGATATAGGTTTTTTGCCCTGAGCTTATAGATCGGTTACTGCC
AGATTGGAATTGCAGCATGGTATATTCCTCCGTGCATTCGATAGCCAAGTTCTCCATGCGCCAGTCAAACTCAAA
GATGATGACTGGATCTTGGATGTAGGTACTGGCACAGGTACGCTTTTCCTGGATTTTGGAAGAAGGGAAATGCTG
AAGAATTTTCACGAGGTATCTGGCTTCAAGATTTAGTCAAAGAGGTTTCCACAAAACCTCAATTTCTCGGTGTAG
ACATCAACTCAAGTTTCTTCCCACAACCGTCTACTCTTCCCAAAAACATATCATTCGAGACTCAATCCGTCCTCG
ATCTTCCCGAAGAATGGACCGACAAATTCACACTTATCAATCAGCGTCTCCTCATCTCGAGCCTTCGTAAACATG
AATGGGGACAAGCTCTAAGAGAGATCTACCGAACTCTCAAACCAGGTGGATGGGTTCAATTGTTCGAGTTGCGAA
CATGGACTTCTGGTCTGGCTCTTGCAAAACAGCTAGATTTGTTTTACAGGTTTTCAGATGACATAGGAATGATGC
ATCGCGACATCACCGTACGACTGCCAGATTTTCTCAAGCAGAGTGACTTTGTGAATATTCATGAGGATACTCGTA
GTAGTCCTCTTGGTGCTTGGGCAAATCAAGATGGTATTGATGGGAAAAATAATCTTATGGGTGTTTTACGGTTTC
TCAAGGCACCGGTATTGAGAGGAGGTGGGTATGGTATAATAGAGAGCGAAGCTGAGTACGATGAATTAGTGGAAG
AGATTTCGAAGGAACTGGATATGACACCCGGATCGGAGGCAGTATGGTCAATGTTCTGGGCACAGAAACCGGTTC
AGTAA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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