Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabiH97|062750
Gene name
Locationscaffold_3:2425211..2428031
Strand-
Gene length (bp)2820
Transcript length (bp)2565
Coding sequence length (bp)2565
Protein length (aa) 855

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF02992 Transposase_21 Transposase family tnp2 8.2E-26 212 339

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 49 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Developmental stages of Agaricus bisporus (strain A15). Published in Pelkmans et al, Applied Microbiology and Biotechnology, 2016

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >AgabiH97|062750
MGEADDRGNGSSSDDEDSFDHGEDGGEDHNGDDQEQTEANSDSEAPPTDVVGIAHWNPDDDYARMLLSTEATLDE
ADLSLLRKYTFKVEEHITEKAFAKLERTFPNVHHDSLKIAKKHVQYLSGLRAELTECPKCHEKRCNDRGKPRKTF
DYIPLVPRLQVMSANRQHAEQIRYRADFEHHDGMVTDVFDGSHYRSLLGQIVPASNNRPFYYFSDPRDIALGLST
DGFSPFKRRDKTCWPIILFNYNLPPDIRFQKKYCINVGTIPGPKKPWDMDSFLWPLMQELIQLETGVKTFDALAK
SSFLLHAYLILVFGDIPAMSMIMRMKGSNGISPCRICKIVGVNSSNSRTYYVPLRREWPPQPTRSYDPSQLPLRI
HDELMAQAGEVQNASNHAASERLSKEYGIKGVPILSTISSISFPASFPFDFMHLIWENLIPNLILFWTGSFKDLD
HQNRGYVIRPDVWKEIGARTAASKTTIPSAFGVPVPNIAQQQGQMTLEMYSNWTLFIAPIVLRNRFEQPIYYTHF
MRLVQLLKMCLEFEITEEMLDQIDGGFRSWVVDYERLYFSHERDRLSACPLTIHALLHIAWGIRIAGPVWAYWAF
PMERHCNTLLPSIRSRRHPYASISAFVTAVAQLDQIKLRFCLQSELDLNPRKNIQSPVLLSDSYPEYKLCPPLRQ
GPLPVHLRDKFYAALATRFEKAKAVVQNFVTFDEPVTHYGRVVCVGGGDTIVASDMVRRSEDSRDTSYIKYVQIV
DRYAHQRNRRPEYVKRSFFGQLQRIIVLNLPPIPQLNIDLPLTVIYAVVQAVKVKLEGSLYYYSTMGATEVIDLS
TVQCLIGRVRDGNRWGIIDRSGISTTMVD*
Coding >AgabiH97|062750
ATGGGTGAAGCAGACGATAGGGGAAATGGTTCCAGTAGCGATGATGAAGACTCGTTCGATCATGGTGAAGACGGT
GGTGAAGACCACAATGGAGACGACCAGGAACAGACCGAGGCCAACAGCGATAGTGAAGCACCTCCTACTGATGTG
GTTGGAATCGCTCATTGGAATCCTGATGACGACTATGCTCGTATGTTGCTATCTACCGAAGCTACTCTGGATGAA
GCCGATCTCAGCCTGCTACGTAAATATACCTTCAAAGTTGAAGAGCACATAACGGAGAAGGCCTTTGCCAAGCTG
GAGCGCACATTCCCGAACGTCCATCACGATTCACTCAAAATAGCAAAGAAGCATGTTCAATATCTATCTGGCTTG
CGGGCGGAACTTACCGAATGTCCTAAATGTCATGAGAAGAGATGCAATGACAGGGGCAAGCCACGAAAGACATTC
GACTATATTCCCTTGGTTCCTCGCTTACAGGTCATGTCTGCCAATCGACAACATGCAGAACAAATACGCTATCGG
GCCGATTTCGAGCACCATGATGGAATGGTGACGGACGTATTTGATGGCTCCCATTACCGCTCACTCCTCGGTCAG
ATTGTCCCTGCAAGCAACAACCGTCCCTTTTATTACTTCTCAGACCCACGAGACATTGCCCTCGGCCTTTCAACA
GATGGTTTTTCTCCATTCAAAAGACGTGATAAAACCTGTTGGCCTATCATACTTTTTAATTATAACCTCCCTCCG
GACATTCGCTTCCAAAAGAAATACTGTATCAATGTTGGGACAATTCCAGGCCCTAAAAAGCCGTGGGATATGGAC
TCTTTTCTCTGGCCGCTTATGCAGGAACTCATCCAACTTGAGACTGGAGTCAAAACCTTCGATGCGCTGGCGAAA
TCCTCTTTTTTACTCCACGCATATCTCATACTCGTTTTTGGTGACATTCCCGCCATGTCTATGATCATGCGCATG
AAAGGGTCGAACGGAATCAGTCCGTGCCGCATTTGCAAGATTGTTGGCGTCAATAGTTCCAACTCTCGCACCTAT
TATGTCCCGTTGCGACGAGAGTGGCCTCCCCAGCCTACTCGTTCTTATGACCCATCTCAACTTCCACTACGCATA
CACGATGAGCTGATGGCTCAGGCGGGGGAGGTTCAGAATGCTAGTAATCATGCCGCATCAGAGCGGCTTTCGAAG
GAGTATGGTATCAAGGGAGTTCCTATCCTTAGTACCATATCTTCTATCTCTTTCCCTGCGTCTTTCCCATTCGAT
TTCATGCACCTAATATGGGAGAATCTTATCCCAAATCTCATCTTATTCTGGACCGGCTCCTTCAAAGATCTTGAT
CATCAAAACCGTGGCTACGTCATCCGGCCTGATGTCTGGAAAGAGATAGGAGCGAGAACTGCAGCCTCCAAGACA
ACCATTCCATCGGCATTCGGTGTGCCAGTCCCTAACATCGCTCAGCAACAAGGTCAGATGACCTTGGAAATGTAC
TCAAACTGGACTCTATTTATTGCACCCATCGTGTTGCGCAATAGGTTTGAGCAGCCTATATATTATACACATTTC
ATGAGGCTCGTCCAGTTGCTTAAGATGTGCCTCGAGTTTGAGATTACCGAAGAGATGCTTGATCAAATTGATGGT
GGTTTTCGGTCCTGGGTAGTGGACTACGAGAGACTTTATTTTTCCCATGAACGCGATCGACTGTCAGCATGTCCC
TTAACAATACATGCGCTCCTTCATATTGCATGGGGCATCCGTATTGCTGGCCCCGTCTGGGCGTATTGGGCTTTC
CCCATGGAACGCCACTGCAACACATTGCTGCCTTCGATCCGAAGTCGACGTCATCCGTATGCATCTATCAGCGCT
TTCGTCACCGCGGTGGCCCAACTTGATCAAATCAAGCTCAGATTTTGTCTACAATCAGAGCTGGACTTGAACCCT
AGGAAAAACATACAGTCACCCGTCTTGCTGTCCGACTCATATCCAGAATACAAGCTTTGTCCACCCCTACGCCAA
GGACCCCTTCCTGTGCACCTTCGTGACAAGTTCTACGCAGCACTTGCGACACGCTTTGAGAAAGCAAAGGCTGTC
GTTCAAAATTTTGTGACATTTGACGAGCCAGTCACTCATTACGGGCGGGTTGTTTGTGTTGGCGGCGGAGATACT
ATCGTGGCCAGTGACATGGTTCGGAGAAGTGAAGACTCTAGAGACACCTCTTACATTAAGTATGTTCAAATTGTC
GACAGGTATGCTCATCAACGGAACCGAAGGCCCGAATATGTGAAAAGGAGTTTCTTCGGTCAACTGCAACGTATC
ATCGTTCTCAACCTACCTCCTATCCCTCAACTGAATATAGATTTGCCATTAACCGTTATTTATGCTGTCGTCCAA
GCCGTCAAAGTCAAGCTTGAAGGCAGTTTATATTATTACAGCACCATGGGAGCAACCGAAGTGATAGACTTAAGT
ACCGTACAATGCCTTATCGGCCGAGTACGGGATGGAAACCGCTGGGGTATAATAGACAGGAGTGGAATTTCAACG
ACGATGGTAGATTGA
Transcript >AgabiH97|062750
ATGGGTGAAGCAGACGATAGGGGAAATGGTTCCAGTAGCGATGATGAAGACTCGTTCGATCATGGTGAAGACGGT
GGTGAAGACCACAATGGAGACGACCAGGAACAGACCGAGGCCAACAGCGATAGTGAAGCACCTCCTACTGATGTG
GTTGGAATCGCTCATTGGAATCCTGATGACGACTATGCTCGTATGTTGCTATCTACCGAAGCTACTCTGGATGAA
GCCGATCTCAGCCTGCTACGTAAATATACCTTCAAAGTTGAAGAGCACATAACGGAGAAGGCCTTTGCCAAGCTG
GAGCGCACATTCCCGAACGTCCATCACGATTCACTCAAAATAGCAAAGAAGCATGTTCAATATCTATCTGGCTTG
CGGGCGGAACTTACCGAATGTCCTAAATGTCATGAGAAGAGATGCAATGACAGGGGCAAGCCACGAAAGACATTC
GACTATATTCCCTTGGTTCCTCGCTTACAGGTCATGTCTGCCAATCGACAACATGCAGAACAAATACGCTATCGG
GCCGATTTCGAGCACCATGATGGAATGGTGACGGACGTATTTGATGGCTCCCATTACCGCTCACTCCTCGGTCAG
ATTGTCCCTGCAAGCAACAACCGTCCCTTTTATTACTTCTCAGACCCACGAGACATTGCCCTCGGCCTTTCAACA
GATGGTTTTTCTCCATTCAAAAGACGTGATAAAACCTGTTGGCCTATCATACTTTTTAATTATAACCTCCCTCCG
GACATTCGCTTCCAAAAGAAATACTGTATCAATGTTGGGACAATTCCAGGCCCTAAAAAGCCGTGGGATATGGAC
TCTTTTCTCTGGCCGCTTATGCAGGAACTCATCCAACTTGAGACTGGAGTCAAAACCTTCGATGCGCTGGCGAAA
TCCTCTTTTTTACTCCACGCATATCTCATACTCGTTTTTGGTGACATTCCCGCCATGTCTATGATCATGCGCATG
AAAGGGTCGAACGGAATCAGTCCGTGCCGCATTTGCAAGATTGTTGGCGTCAATAGTTCCAACTCTCGCACCTAT
TATGTCCCGTTGCGACGAGAGTGGCCTCCCCAGCCTACTCGTTCTTATGACCCATCTCAACTTCCACTACGCATA
CACGATGAGCTGATGGCTCAGGCGGGGGAGGTTCAGAATGCTAGTAATCATGCCGCATCAGAGCGGCTTTCGAAG
GAGTATGGTATCAAGGGAGTTCCTATCCTTAGTACCATATCTTCTATCTCTTTCCCTGCGTCTTTCCCATTCGAT
TTCATGCACCTAATATGGGAGAATCTTATCCCAAATCTCATCTTATTCTGGACCGGCTCCTTCAAAGATCTTGAT
CATCAAAACCGTGGCTACGTCATCCGGCCTGATGTCTGGAAAGAGATAGGAGCGAGAACTGCAGCCTCCAAGACA
ACCATTCCATCGGCATTCGGTGTGCCAGTCCCTAACATCGCTCAGCAACAAGGTCAGATGACCTTGGAAATGTAC
TCAAACTGGACTCTATTTATTGCACCCATCGTGTTGCGCAATAGGTTTGAGCAGCCTATATATTATACACATTTC
ATGAGGCTCGTCCAGTTGCTTAAGATGTGCCTCGAGTTTGAGATTACCGAAGAGATGCTTGATCAAATTGATGGT
GGTTTTCGGTCCTGGGTAGTGGACTACGAGAGACTTTATTTTTCCCATGAACGCGATCGACTGTCAGCATGTCCC
TTAACAATACATGCGCTCCTTCATATTGCATGGGGCATCCGTATTGCTGGCCCCGTCTGGGCGTATTGGGCTTTC
CCCATGGAACGCCACTGCAACACATTGCTGCCTTCGATCCGAAGTCGACGTCATCCGTATGCATCTATCAGCGCT
TTCGTCACCGCGGTGGCCCAACTTGATCAAATCAAGCTCAGATTTTGTCTACAATCAGAGCTGGACTTGAACCCT
AGGAAAAACATACAGTCACCCGTCTTGCTGTCCGACTCATATCCAGAATACAAGCTTTGTCCACCCCTACGCCAA
GGACCCCTTCCTGTGCACCTTCGTGACAAGTTCTACGCAGCACTTGCGACACGCTTTGAGAAAGCAAAGGCTGTC
GTTCAAAATTTTGTGACATTTGACGAGCCAGTCACTCATTACGGGCGGGTTGTTTGTGTTGGCGGCGGAGATACT
ATCGTGGCCAGTGACATGGTTCGGAGAAGTGAAGACTCTAGAGACACCTCTTACATTAAGTATGTTCAAATTGTC
GACAGGTATGCTCATCAACGGAACCGAAGGCCCGAATATGTGAAAAGGAGTTTCTTCGGTCAACTGCAACGTATC
ATCGTTCTCAACCTACCTCCTATCCCTCAACTGAATATAGATTTGCCATTAACCGTTATTTATGCTGTCGTCCAA
GCCGTCAAAGTCAAGCTTGAAGGCAGTTTATATTATTACAGCACCATGGGAGCAACCGAAGTGATAGACTTAAGT
ACCGTACAATGCCTTATCGGCCGAGTACGGGATGGAAACCGCTGGGGTATAATAGACAGGAGTGGAATTTCAACG
ACGATGGTAGATTGA
Gene >AgabiH97|062750
ATGGGTGAAGCAGACGATAGGGGAAATGGTTCCAGTAGCGATGATGAAGACTCGTTCGATCATGGTGAAGACGGT
GGTGAAGACCACAATGGAGACGACCAGGAACAGACCGAGGCCAACAGCGATAGTGAAGCACCTCCTACTGATGTG
GTTGGAATCGCTCATTGGAATCCTGATGACGACTATGCTCGTATGTTGCTATCTACCGGTATGTCTCCTTTTATT
GCAATAGACACTATCTAACTCTTATCGTGATCTAGAAGCTACTCTGGATGAAGCCGATCTCAGCCTGCTACGTAA
ATATACCTTCAAAGTTGAAGAGCACATAACGGAGAAGGCCTTTGCCAAGCTGGAGCGCACATTCCCGAACGTCCA
TCACGATTCACTCAAAATAGCAAAGAAGCATGTTCAATATCTATCTGGCTTGCGGGCGGTAAAATATAGCTGCTG
TGTGAACAGCTGCGTCTGCTTCACAGGGCCGTATCAGGAACTTACCGAATGTCCTAAATGTCATGAGAAGAGATG
CAATGACAGGGGCAAGCCACGAAAGACATTCGACTATATTCCCTTGGTTCCTCGCTTACAGGTCATGTCTGCCAA
TCGACAACATGCAGAACAAATACGCTATCGGGCCGATTTCGAGCACCATGATGGAATGGTGACGGACGTATTTGA
TGGCTCCCATTACCGCTCACTCCTCGGTCAGATTGTCCCTGCAAGCAACAACCGTCCCTTTTATTACTTCTCAGA
CCCACGAGACATTGCCCTCGGCCTTTCAACAGATGGTTTTTCTCCATTCAAAAGACGTGATAAAACCTGTTGGCC
TATCATACTTTTTAATTATAACCTCCCTCCGGACATTCGCTTCCAAAAGAAATACTGTATCAATGTTGGGACAAT
TCCAGGCCCTAAAAAGCCGTGGGATATGGACTCTTTTCTCTGGCCGCTTATGCAGGAACTCATCCAACTTGAGAC
TGGAGTCAAAACCTTCGATGCGCTGGCGAAATCCTCTTTTTTACTCCACGCATATCTCATACTCGTTTTTGGTGA
CATTCCCGCCATGTCTATGATCATGCGCATGAAAGGGTCGAACGGAATCAGTCCGTGCCGCATTTGCAAGATTGT
TGGCGTCAATAGTTCCAACTCTCGCACCTATTATGTCCCGTTGCGACGAGAGTGGCCTCCCCAGCCTACTCGTTC
TTATGACCCATCTCAACTTCCACTACGCATACACGATGAGCTGATGGCTCAGGCGGGGGAGGTTCAGAATGCTAG
TAATCATGCCGCATCAGAGCGGCTTTCGAAGGAGTATGGTATCAAGGGAGTTCCTATCCTTAGTACCATATCTTC
TATCTCTTTCCCTGCGTCTTTCCCATTCGATTTCATGCACCTAATATGGGAGAATCTTATCCCAAATCTCATCTT
ATTCTGGACCGGCTCCTTCAAAGATCTTGATCATCAAAACCGTGGCTACGTCATCCGGCCTGATGTCTGGAAAGA
GATAGGAGCGAGAACTGCAGCCTCCAAGACAACCATTCCATCGGCATTCGGTGTGCCAGTCCCTAACATCGCTCA
GCAACAAGGTCAGATGACCTTGGAAATGTACTCAAACTGGACTCTATTTATTGCACCCATCGTGTTGCGCAATAG
GTTTGAGCAGCCTATATATTATACACATTTCATGAGGCTCGTCCAGTTGCTTAAGATGTGCCTCGAGTTTGAGAT
TACCGAAGAGATGCTTGATCAAATTGATGGTGGTTTTCGGTCCTGGGTAGTGGACTACGAGAGGTACGTTTCTTA
TCAGGATGGGCCATACGACAACTAAAACTGCGTGTAGACTTTATTTTTCCCATGAACGCGATCGACTGTCAGCAT
GTCCCTTAACAATACATGCGCTCCTTCATATTGCATGGGGCATCCGTATTGCTGGCCCCGTCTGGGCGTATTGGG
CTTTCCCCATGGAACGCCACTGCAACACATTGCTGCCTTCGATCCGAAGTCGACGTCATCCGTATGCATCTATCA
GCGCTTTCGTCACCGCGGTGGCCCAACTTGATCAAATCAAGCTCAGATTTTGTCTACAATCAGAGCTGGACTTGA
ACCCTAGGAAAAACATACAGTCACCCGTCTTGCTGTCCGACTCATGTTGCGTTCCCTAACCATTCCTGATGCTGA
AAGCTAACTTAATCCTGTAGATCCAGAATACAAGCTTTGTCCACCCCTACGCCAAGGACCCCTTCCTGTGCACCT
TCGTGACAAGTTCTACGCAGCACTTGCGACACGCTTTGAGAAAGCAAAGGCTGTCGTTCAAAATTTTGTGACATT
TGACGAGCCAGTCACTCATTACGGGCGGGTTGTTTGTGTTGGCGGCGGAGATACTATCGTGGCCAGTGACATGGT
TCGGAGAAGTGAAGACTCTAGAGACACCTCTTACATTAAGGTGAGTGAACATTACTCTTTAGCTCTCTCATACTG
AATCCCATCCACTAGTATGTTCAAATTGTCGACAGGTATGCTCATCAACGGAACCGAAGGCCCGAATATGTGAAA
AGGAGTTTCTTCGGTCAACTGCAACGTATCATCGTTCTCAACCTACCTCCTATCCCTCAACTGAATATAGATTTG
CCATTAACCGTTATTTATGCTGTCGTCCAAGCCGTCAAAGTCAAGCTTGAAGGCAGTTTATATTATTACAGCACC
ATGGGAGCAACCGAAGTGATAGACTTAAGTACCGTACAATGCCTTATCGGCCGAGTACGGGATGGAAACCGCTGG
GGTATAATAGACAGGAGTGGAATTTCAACGACGATGGTAGATTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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