Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabiH97|061730
Gene name
Locationscaffold_3:2172496..2173071
Strand-
Gene length (bp)575
Transcript length (bp)513
Coding sequence length (bp)513
Protein length (aa) 171

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 25 0.5

Transmembrane Domains

Domain # Start End Length
1 7 29 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Developmental stages of Agaricus bisporus (strain A15). Published in Pelkmans et al, Applied Microbiology and Biotechnology, 2016

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >AgabiH97|061730
MKQGTAMTLFLLAIFITMLLLAAAMIAFVCSRPPRVTEFTPRVWYTSDNGGNDPETLCNSINRLGRPPSYSSSLS
SQRASSFFMIPDGTGMPYNASESFKNDIISVSPSKPVIVGSESMQGGMSMKLMVTPPTPSKARVDESTLEELSFD
LCDDSDSDEDEEDEESDEVM*
Coding >AgabiH97|061730
ATGAAGCAAGGAACAGCCATGACATTATTTCTCCTTGCAATCTTTATAACCATGCTACTCCTCGCTGCCGCTATG
ATCGCATTCGTTTGCTCCCGTCCCCCTCGTGTGACTGAATTTACGCCTCGAGTCTGGTATACCTCCGACAACGGC
GGCAACGATCCAGAAACTCTCTGCAATAGTATTAATCGCCTTGGCCGTCCGCCATCTTACTCCAGCAGTCTCTCC
TCTCAGCGAGCATCATCCTTCTTCATGATACCTGATGGAACTGGAATGCCATATAATGCTTCTGAATCATTCAAG
AACGATATAATTTCCGTATCACCGTCGAAACCAGTTATAGTAGGGAGCGAGAGCATGCAGGGAGGAATGAGTATG
AAGTTGATGGTTACCCCGCCCACACCGTCAAAGGCTAGAGTTGATGAGAGCACATTAGAGGAGCTGAGTTTTGAT
TTATGCGACGATTCGGACAGTGATGAGGATGAAGAGGACGAAGAGTCTGACGAGGTCATGTAG
Transcript >AgabiH97|061730
ATGAAGCAAGGAACAGCCATGACATTATTTCTCCTTGCAATCTTTATAACCATGCTACTCCTCGCTGCCGCTATG
ATCGCATTCGTTTGCTCCCGTCCCCCTCGTGTGACTGAATTTACGCCTCGAGTCTGGTATACCTCCGACAACGGC
GGCAACGATCCAGAAACTCTCTGCAATAGTATTAATCGCCTTGGCCGTCCGCCATCTTACTCCAGCAGTCTCTCC
TCTCAGCGAGCATCATCCTTCTTCATGATACCTGATGGAACTGGAATGCCATATAATGCTTCTGAATCATTCAAG
AACGATATAATTTCCGTATCACCGTCGAAACCAGTTATAGTAGGGAGCGAGAGCATGCAGGGAGGAATGAGTATG
AAGTTGATGGTTACCCCGCCCACACCGTCAAAGGCTAGAGTTGATGAGAGCACATTAGAGGAGCTGAGTTTTGAT
TTATGCGACGATTCGGACAGTGATGAGGATGAAGAGGACGAAGAGTCTGACGAGGTCATGTAG
Gene >AgabiH97|061730
ATGAAGCAAGGAACAGCCAGTGCGTCGTGATCCTTGTCAAAGCGTTATCGTCGAAGTCCTTTTCTAACGATTCTC
GTACAGTGACATTATTTCTCCTTGCAATCTTTATAACCATGCTACTCCTCGCTGCCGCTATGATCGCATTCGTTT
GCTCCCGTCCCCCTCGTGTGACTGAATTTACGCCTCGAGTCTGGTATACCTCCGACAACGGCGGCAACGATCCAG
AAACTCTCTGCAATAGTATTAATCGCCTTGGCCGTCCGCCATCTTACTCCAGCAGTCTCTCCTCTCAGCGAGCAT
CATCCTTCTTCATGATACCTGATGGAACTGGAATGCCATATAATGCTTCTGAATCATTCAAGAACGATATAATTT
CCGTATCACCGTCGAAACCAGTTATAGTAGGGAGCGAGAGCATGCAGGGAGGAATGAGTATGAAGTTGATGGTTA
CCCCGCCCACACCGTCAAAGGCTAGAGTTGATGAGAGCACATTAGAGGAGCTGAGTTTTGATTTATGCGACGATT
CGGACAGTGATGAGGATGAAGAGGACGAAGAGTCTGACGAGGTCATGTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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