© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | AgabiH97|060860 |
| Gene name | |
| Location | scaffold_3:1970965..1972085 |
| Strand | + |
| Gene length (bp) | 1120 |
| Transcript length (bp) | 804 |
| Coding sequence length (bp) | 804 |
| Protein length (aa) | 268 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF01161 | PBP | Phosphatidylethanolamine-binding protein | 3.9E-16 | 74 | 166 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|P31729|OV16_ONCVO | OV-16 antigen OS=Onchocerca volvulus GN=OV16 PE=2 SV=2 | 5 | 201 | 1.0E-12 |
| sp|P54185|OBA5_DROME | Putative odorant-binding protein A5 OS=Drosophila melanogaster GN=a5 PE=2 SV=2 | 11 | 157 | 2.0E-12 |
| sp|P54186|D1_ONCVO | Protein D1 (Fragment) OS=Onchocerca volvulus GN=D1 PE=2 SV=1 | 49 | 201 | 4.0E-10 |
| sp|P54187|D2_ONCVO | Protein D2 (Fragment) OS=Onchocerca volvulus GN=D2 PE=2 SV=1 | 91 | 201 | 6.0E-10 |
| sp|P54188|D3_ONCVO | Protein D3 (Fragment) OS=Onchocerca volvulus GN=D3 PE=2 SV=1 | 65 | 201 | 3.0E-08 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|P31729|OV16_ONCVO | OV-16 antigen OS=Onchocerca volvulus GN=OV16 PE=2 SV=2 | 5 | 201 | 1.0E-12 |
| sp|P54185|OBA5_DROME | Putative odorant-binding protein A5 OS=Drosophila melanogaster GN=a5 PE=2 SV=2 | 11 | 157 | 2.0E-12 |
| sp|P54186|D1_ONCVO | Protein D1 (Fragment) OS=Onchocerca volvulus GN=D1 PE=2 SV=1 | 49 | 201 | 4.0E-10 |
| sp|P54187|D2_ONCVO | Protein D2 (Fragment) OS=Onchocerca volvulus GN=D2 PE=2 SV=1 | 91 | 201 | 6.0E-10 |
| sp|P54188|D3_ONCVO | Protein D3 (Fragment) OS=Onchocerca volvulus GN=D3 PE=2 SV=1 | 65 | 201 | 3.0E-08 |
| sp|P14306|CPYI_YEAST | Carboxypeptidase Y inhibitor OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TFS1 PE=1 SV=2 | 20 | 159 | 5.0E-08 |
| sp|Q06252|YL179_YEAST | Uncharacterized protein YLR179C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YLR179C PE=1 SV=1 | 28 | 203 | 6.0E-08 |
| sp|P93003|TFL1_ARATH | Protein TERMINAL FLOWER 1 OS=Arabidopsis thaliana GN=TFL1 PE=1 SV=1 | 24 | 157 | 8.0E-07 |
| sp|Q96S96|PEBP4_HUMAN | Phosphatidylethanolamine-binding protein 4 OS=Homo sapiens GN=PEBP4 PE=1 SV=3 | 90 | 157 | 8.0E-06 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| Yes | 1 - 18 | 0.45 |
Expression values
| Label | Description | Expression (RPKM) | Confidence interval (low) | Confidence interval (high) |
|---|---|---|---|---|
| Casing | Casing mycelium | 369.69 | 206.20 | 533.18 |
| Initials | Initials knots | 178.12 | 106.06 | 250.18 |
| Pileal_Stipeal_center | Stage I stipe center | 374.58 | 219.10 | 530.05 |
| Pileal_Stipeal_shell | Stage I stipe shell | 396.09 | 224.73 | 567.46 |
| DIF_stipe_center | Stage II stipe center | 416.45 | 240.93 | 591.97 |
| DIF_stipe_shell | Stage II stipe shell | 302.75 | 179.37 | 426.13 |
| DIF_stipe_skin | Stage II stipe skin | 335.75 | 196.64 | 474.85 |
| DIF_cap_skin | Stage II cap skin | 504.06 | 286.11 | 722.02 |
| DIF_cap_tissue | Stage II cap tissue | 467.40 | 268.05 | 666.75 |
| DIF_gill_tissue | Stage II gill tissue | 451.27 | 259.28 | 643.26 |
| YFB_stipe_center | Young fruiting body stipe center | 453.11 | 257.30 | 648.93 |
| YFB_stipe_shell | Young fruiting body stipe shell | 358.87 | 210.06 | 507.68 |
| YFB_stipe_skin | Young fruiting body stipe skin | 356.40 | 206.88 | 505.91 |
| YFB_cap_skin | Young fruiting body cap skin | 428.96 | 247.93 | 609.99 |
| YFB_cap_tissue | Young fruiting body cap tissue | 415.75 | 241.04 | 590.46 |
| YFB_gill_tissue | Young fruiting body gill tissue | 367.89 | 212.90 | 522.87 |
| YFB_veil | Young fruiting body veil | 387.41 | 223.96 | 550.86 |
Differential expression
| Label1 | Label2 | Q-value | Significant difference |
|---|---|---|---|
| Casing | DIF_gill_tissue | 0.624602 | no |
| Casing | YFB_stipe_center | 0.620847 | no |
| Casing | YFB_stipe_shell | 0.959699 | no |
| Casing | YFB_stipe_skin | 0.950386 | no |
| Casing | YFB_cap_skin | 0.742721 | no |
| Casing | YFB_cap_tissue | 0.813016 | no |
| Casing | YFB_gill_tissue | 0.992998 | no |
| Casing | YFB_veil | 0.935199 | no |
| Casing | Initials | 0.005671 | yes |
| Casing | Pileal_Stipeal_center | 0.982058 | no |
| Casing | Pileal_Stipeal_shell | 0.901721 | no |
| Casing | DIF_stipe_center | 0.803499 | no |
| Casing | DIF_stipe_shell | 0.612734 | no |
| Casing | DIF_stipe_skin | 0.848127 | no |
| Casing | DIF_cap_skin | 0.369371 | no |
| Casing | DIF_cap_tissue | 0.534619 | no |
| DIF_gill_tissue | YFB_stipe_center | 0.993849 | no |
| DIF_gill_tissue | YFB_stipe_shell | 0.528877 | no |
| DIF_gill_tissue | YFB_stipe_skin | 0.526001 | no |
| DIF_gill_tissue | YFB_cap_skin | 0.925803 | no |
| DIF_gill_tissue | YFB_cap_tissue | 0.873617 | no |
| DIF_gill_tissue | YFB_gill_tissue | 0.598330 | no |
| DIF_gill_tissue | YFB_veil | 0.724739 | no |
| YFB_stipe_center | YFB_stipe_shell | 0.524212 | no |
| YFB_stipe_center | YFB_stipe_skin | 0.520567 | no |
| YFB_stipe_center | YFB_cap_skin | 0.921150 | no |
| YFB_stipe_center | YFB_cap_tissue | 0.867943 | no |
| YFB_stipe_center | YFB_gill_tissue | 0.593498 | no |
| YFB_stipe_center | YFB_veil | 0.717176 | no |
| YFB_stipe_shell | YFB_stipe_skin | 0.990904 | no |
| YFB_stipe_shell | YFB_cap_skin | 0.664474 | no |
| YFB_stipe_shell | YFB_cap_tissue | 0.743755 | no |
| YFB_stipe_shell | YFB_gill_tissue | 0.965183 | no |
| YFB_stipe_shell | YFB_veil | 0.883249 | no |
| YFB_stipe_skin | YFB_cap_skin | 0.647939 | no |
| YFB_stipe_skin | YFB_cap_tissue | 0.727960 | no |
| YFB_stipe_skin | YFB_gill_tissue | 0.954012 | no |
| YFB_stipe_skin | YFB_veil | 0.870568 | no |
| YFB_cap_skin | YFB_cap_tissue | 0.955865 | no |
| YFB_cap_skin | YFB_gill_tissue | 0.717934 | no |
| YFB_cap_skin | YFB_veil | 0.832399 | no |
| YFB_cap_tissue | YFB_gill_tissue | 0.786763 | no |
| YFB_cap_tissue | YFB_veil | 0.892708 | no |
| YFB_gill_tissue | YFB_veil | 0.925332 | no |
| Initials | DIF_gill_tissue | 0.000613 | yes |
| Initials | YFB_stipe_center | 0.000613 | yes |
| Initials | YFB_stipe_shell | 0.006742 | yes |
| Initials | YFB_stipe_skin | 0.006032 | yes |
| Initials | YFB_cap_skin | 0.000613 | yes |
| Initials | YFB_cap_tissue | 0.000613 | yes |
| Initials | YFB_gill_tissue | 0.004548 | yes |
| Initials | YFB_veil | 0.002525 | yes |
| Initials | Pileal_Stipeal_center | 0.003365 | yes |
| Initials | Pileal_Stipeal_shell | 0.001140 | yes |
| Initials | DIF_stipe_center | 0.000613 | yes |
| Initials | DIF_stipe_shell | 0.048834 | yes |
| Initials | DIF_stipe_skin | 0.011350 | yes |
| Initials | DIF_cap_skin | 0.000613 | yes |
| Initials | DIF_cap_tissue | 0.000613 | yes |
| Pileal_Stipeal_center | DIF_gill_tissue | 0.638725 | no |
| Pileal_Stipeal_center | YFB_stipe_center | 0.635021 | no |
| Pileal_Stipeal_center | YFB_stipe_shell | 0.937611 | no |
| Pileal_Stipeal_center | YFB_stipe_skin | 0.926822 | no |
| Pileal_Stipeal_center | YFB_cap_skin | 0.757507 | no |
| Pileal_Stipeal_center | YFB_cap_tissue | 0.827521 | no |
| Pileal_Stipeal_center | YFB_gill_tissue | 0.974124 | no |
| Pileal_Stipeal_center | YFB_veil | 0.953073 | no |
| Pileal_Stipeal_center | Pileal_Stipeal_shell | 0.917669 | no |
| Pileal_Stipeal_center | DIF_stipe_center | 0.819598 | no |
| Pileal_Stipeal_center | DIF_stipe_shell | 0.562185 | no |
| Pileal_Stipeal_center | DIF_stipe_skin | 0.811592 | no |
| Pileal_Stipeal_center | DIF_cap_skin | 0.379207 | no |
| Pileal_Stipeal_center | DIF_cap_tissue | 0.546247 | no |
| Pileal_Stipeal_shell | DIF_gill_tissue | 0.775464 | no |
| Pileal_Stipeal_shell | YFB_stipe_center | 0.769938 | no |
| Pileal_Stipeal_shell | YFB_stipe_shell | 0.841067 | no |
| Pileal_Stipeal_shell | YFB_stipe_skin | 0.830042 | no |
| Pileal_Stipeal_shell | YFB_cap_skin | 0.877923 | no |
| Pileal_Stipeal_shell | YFB_cap_tissue | 0.931583 | no |
| Pileal_Stipeal_shell | YFB_gill_tissue | 0.887268 | no |
| Pileal_Stipeal_shell | YFB_veil | 0.970529 | no |
| Pileal_Stipeal_shell | DIF_stipe_center | 0.927730 | no |
| Pileal_Stipeal_shell | DIF_stipe_shell | 0.440546 | no |
| Pileal_Stipeal_shell | DIF_stipe_skin | 0.693072 | no |
| Pileal_Stipeal_shell | DIF_cap_skin | 0.518154 | no |
| Pileal_Stipeal_shell | DIF_cap_tissue | 0.691081 | no |
| DIF_stipe_center | DIF_gill_tissue | 0.874234 | no |
| DIF_stipe_center | YFB_stipe_center | 0.868685 | no |
| DIF_stipe_center | YFB_stipe_shell | 0.727140 | no |
| DIF_stipe_center | YFB_stipe_skin | 0.720333 | no |
| DIF_stipe_center | YFB_cap_skin | 0.958237 | no |
| DIF_stipe_center | YFB_cap_tissue | 0.996937 | no |
| DIF_stipe_center | YFB_gill_tissue | 0.784153 | no |
| DIF_stipe_center | YFB_veil | 0.888882 | no |
| DIF_stipe_center | DIF_stipe_shell | 0.328346 | no |
| DIF_stipe_center | DIF_stipe_skin | 0.572275 | no |
| DIF_stipe_center | DIF_cap_skin | 0.636669 | no |
| DIF_stipe_center | DIF_cap_tissue | 0.800038 | no |
| DIF_stipe_shell | DIF_gill_tissue | 0.184076 | no |
| DIF_stipe_shell | YFB_stipe_center | 0.191340 | no |
| DIF_stipe_shell | YFB_stipe_shell | 0.670818 | no |
| DIF_stipe_shell | YFB_stipe_skin | 0.696205 | no |
| DIF_stipe_shell | YFB_cap_skin | 0.270661 | no |
| DIF_stipe_shell | YFB_cap_tissue | 0.332446 | no |
| DIF_stipe_shell | YFB_gill_tissue | 0.614230 | no |
| DIF_stipe_shell | YFB_veil | 0.489517 | no |
| DIF_stipe_shell | DIF_stipe_skin | 0.824551 | no |
| DIF_stipe_shell | DIF_cap_skin | 0.074840 | no |
| DIF_stipe_shell | DIF_cap_tissue | 0.140421 | no |
| DIF_stipe_skin | DIF_gill_tissue | 0.375672 | no |
| DIF_stipe_skin | YFB_stipe_center | 0.376951 | no |
| DIF_stipe_skin | YFB_stipe_shell | 0.898413 | no |
| DIF_stipe_skin | YFB_stipe_skin | 0.911766 | no |
| DIF_stipe_skin | YFB_cap_skin | 0.496484 | no |
| DIF_stipe_skin | YFB_cap_tissue | 0.581299 | no |
| DIF_stipe_skin | YFB_gill_tissue | 0.851753 | no |
| DIF_stipe_skin | YFB_veil | 0.743755 | no |
| DIF_stipe_skin | DIF_cap_skin | 0.185699 | no |
| DIF_stipe_skin | DIF_cap_tissue | 0.298885 | no |
| DIF_cap_skin | DIF_gill_tissue | 0.816867 | no |
| DIF_cap_skin | YFB_stipe_center | 0.827262 | no |
| DIF_cap_skin | YFB_stipe_shell | 0.292326 | no |
| DIF_cap_skin | YFB_stipe_skin | 0.291857 | no |
| DIF_cap_skin | YFB_cap_skin | 0.705609 | no |
| DIF_cap_skin | YFB_cap_tissue | 0.636669 | no |
| DIF_cap_skin | YFB_gill_tissue | 0.356545 | no |
| DIF_cap_skin | YFB_veil | 0.466032 | no |
| DIF_cap_skin | DIF_cap_tissue | 0.883204 | no |
| DIF_cap_tissue | DIF_gill_tissue | 0.950483 | no |
| DIF_cap_tissue | YFB_stipe_center | 0.956969 | no |
| DIF_cap_tissue | YFB_stipe_shell | 0.440629 | no |
| DIF_cap_tissue | YFB_stipe_skin | 0.438945 | no |
| DIF_cap_tissue | YFB_cap_skin | 0.862364 | no |
| DIF_cap_tissue | YFB_cap_tissue | 0.803199 | no |
| DIF_cap_tissue | YFB_gill_tissue | 0.511427 | no |
| DIF_cap_tissue | YFB_veil | 0.636040 | no |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >AgabiH97|060860 MHSYLAIVSTFLALAAAQQNSDTNMGLAAIEAHFNQSHIVPDLLSAFQPQAVLGVNFGAGDIQPGQKFTIEEAGS APTLTVNSSSPLNGSYVLAMIDADVPNSQLQKHNRHWLVGNVTIGQDSVVSNATATSYSRYFGPFPPSGSGPHRY VIMLYAQPSDFNPPAEFATTDLPVEPMDWQAYVNDSHLGGLVAANYIQVEQGTASASIFSTAPVVSSTLVAASTT AGSATTSSTQTGSSNESNGAKVLDFHVPAVMGLATLATLLLA* |
| Coding | >AgabiH97|060860 ATGCATTCTTACCTTGCCATCGTTTCAACGTTCCTGGCTCTCGCCGCCGCTCAACAAAATAGCGACACAAATATG GGCCTCGCCGCTATTGAGGCTCACTTCAATCAGTCGCATATTGTCCCTGATTTGTTGTCTGCCTTCCAGCCTCAA GCTGTCCTCGGAGTGAACTTTGGTGCGGGTGACATTCAGCCGGGCCAGAAGTTTACCATAGAAGAGGCTGGCTCT GCACCCACTTTGACTGTCAACAGTTCCTCTCCCTTGAACGGGTCGTACGTGTTGGCCATGATAGACGCTGACGTG CCCAACTCGCAATTACAAAAACACAACCGTCACTGGCTGGTTGGCAATGTCACAATTGGCCAAGACTCGGTGGTT AGCAACGCGACAGCTACAAGCTACTCTCGCTACTTTGGCCCATTCCCGCCATCAGGTTCAGGTCCTCACCGTTAT GTCATAATGTTATATGCACAACCTTCCGATTTCAACCCTCCTGCTGAGTTTGCAACGACCGACTTGCCTGTGGAA CCAATGGACTGGCAAGCATATGTCAACGACTCACACCTTGGAGGTCTTGTGGCTGCTAATTATATTCAGGTTGAA CAAGGTACTGCTAGCGCATCAATCTTCTCCACTGCACCTGTCGTCTCTTCCACTTTGGTTGCCGCTTCGACTACT GCTGGCTCTGCCACTACTTCTTCTACTCAAACTGGCTCGAGCAACGAGTCCAATGGAGCCAAGGTCCTGGATTTC CACGTCCCAGCTGTCATGGGCTTAGCCACTCTTGCTACCTTACTTCTCGCATAA |
| Transcript | >AgabiH97|060860 ATGCATTCTTACCTTGCCATCGTTTCAACGTTCCTGGCTCTCGCCGCCGCTCAACAAAATAGCGACACAAATATG GGCCTCGCCGCTATTGAGGCTCACTTCAATCAGTCGCATATTGTCCCTGATTTGTTGTCTGCCTTCCAGCCTCAA GCTGTCCTCGGAGTGAACTTTGGTGCGGGTGACATTCAGCCGGGCCAGAAGTTTACCATAGAAGAGGCTGGCTCT GCACCCACTTTGACTGTCAACAGTTCCTCTCCCTTGAACGGGTCGTACGTGTTGGCCATGATAGACGCTGACGTG CCCAACTCGCAATTACAAAAACACAACCGTCACTGGCTGGTTGGCAATGTCACAATTGGCCAAGACTCGGTGGTT AGCAACGCGACAGCTACAAGCTACTCTCGCTACTTTGGCCCATTCCCGCCATCAGGTTCAGGTCCTCACCGTTAT GTCATAATGTTATATGCACAACCTTCCGATTTCAACCCTCCTGCTGAGTTTGCAACGACCGACTTGCCTGTGGAA CCAATGGACTGGCAAGCATATGTCAACGACTCACACCTTGGAGGTCTTGTGGCTGCTAATTATATTCAGGTTGAA CAAGGTACTGCTAGCGCATCAATCTTCTCCACTGCACCTGTCGTCTCTTCCACTTTGGTTGCCGCTTCGACTACT GCTGGCTCTGCCACTACTTCTTCTACTCAAACTGGCTCGAGCAACGAGTCCAATGGAGCCAAGGTCCTGGATTTC CACGTCCCAGCTGTCATGGGCTTAGCCACTCTTGCTACCTTACTTCTCGCATAA |
| Gene | >AgabiH97|060860 ATGCATTCTTACCTTGCCATCGTTTCAACGTTCCTGGCTCTCGCCGCCGCTCAACAAAATAGCGACACAAATATG GGCCTCGCCGCTATTGAGGCTCACTTCAATCAGTCGCATATTGTCCCTGATTTGTTGTCTGCCTTCCAGCCTCAA GCTGTCCTCGGAGTGAACTTTGGTGAGTTTCAGTGGTTTGAAGTGGAAATGCCTAGCTCAAATCTTGTTAAAGGT GCGGGTGACATTCAGCCGGGCCAGAAGTTTACCATAGAAGGTGTGTTTCCCTTTCGCCCATGTTCGTCGCAGCGT GTTCACTGTGTTGCTCTGTAGAGGCTGGCTCTGCACCCACTTTGACTGTCAACAGTTCCTCTCCCTTGAACGGGT CGTACGTGTTGGCCATGATAGACGCTGACGTGCCCAACTCGCAATTACAAAAACACAACCGTCACTGGCTGGTTG GCAATGTCACAATTGGCCAAGGTCAGTCGAAAAGCAAATGCCCTACTCACTCAAGTTTTTGCTCACATATCACAG ACTCGGTGGTTAGCAACGCGACAGCTACAAGCTACTCTCGCTACTTTGGCCCATTCCCGCCATCAGGTTCAGGTC CTCACCGGTCAGCGTGGTTGCCAGCTTGGGGGTTCAGGAATGCTAACGGCTCACCAACAGTTATGTCATAATGTT ATATGCACAACCTTCCGATTTCAACCCTCCTGCTGAGTTTGCAACGACCGACTTGCCTGTGGAACCAATGGACTG GCAAGCATATGTCAACGTAAGGCCATCTTAACATCATATATCTCCTGAATCTCATATTTTGTGCAGGACTCACAC CTTGGAGGTCTTGTGGCTGTAAGTAAGATATATCTCGAGTCTCGGCCACTTCACTGATTTTGTTCGACAGGCTAA TTATATTCAGGTTGAACAAGGTACTGCTAGCGCATCAATCTTCTCCACTGCACCTGTCGTCTCTTCCACTTTGGT TGCCGCTTCGACTACTGCTGGCTCTGCCACTACTTCTTCTACTCAAACTGGCTCGAGCAACGAGTCCAATGGAGC CAAGGTCCTGGATTTCCACGTCCCAGCTGTCATGGGCTTAGCCACTCTTGCTACCTTACTTCTCGCATAA |