Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabiH97|059530
Gene name
Locationscaffold_3:1653435..1655181
Strand+
Gene length (bp)1746
Transcript length (bp)1425
Coding sequence length (bp)1425
Protein length (aa) 475

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF09739 MCM_bind Mini-chromosome maintenance replisome factor 4.5E-42 150 461

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|B5DG51|MCMBP_SALSA Mini-chromosome maintenance complex-binding protein OS=Salmo salar GN=mcmbp PE=2 SV=1 8 405 2.0E-22
sp|Q501D5|MCMBP_ARATH Mini-chromosome maintenance complex-binding protein OS=Arabidopsis thaliana GN=ETG1 PE=1 SV=1 167 452 2.0E-21
sp|Q28DV7|MCMBP_XENTR Mini-chromosome maintenance complex-binding protein OS=Xenopus tropicalis GN=mcmbp PE=2 SV=2 34 421 2.0E-20
sp|Q5ZJV4|MCMBP_CHICK Mini-chromosome maintenance complex-binding protein OS=Gallus gallus GN=MCMBP PE=2 SV=2 145 421 3.0E-20
sp|Q7ZYP6|MCMBP_XENLA Mini-chromosome maintenance complex-binding protein OS=Xenopus laevis GN=mcmbp PE=1 SV=1 4 421 7.0E-19
[Show all]
[Show less]
Swissprot ID Swissprot Description Start End E-value
sp|B5DG51|MCMBP_SALSA Mini-chromosome maintenance complex-binding protein OS=Salmo salar GN=mcmbp PE=2 SV=1 8 405 2.0E-22
sp|Q501D5|MCMBP_ARATH Mini-chromosome maintenance complex-binding protein OS=Arabidopsis thaliana GN=ETG1 PE=1 SV=1 167 452 2.0E-21
sp|Q28DV7|MCMBP_XENTR Mini-chromosome maintenance complex-binding protein OS=Xenopus tropicalis GN=mcmbp PE=2 SV=2 34 421 2.0E-20
sp|Q5ZJV4|MCMBP_CHICK Mini-chromosome maintenance complex-binding protein OS=Gallus gallus GN=MCMBP PE=2 SV=2 145 421 3.0E-20
sp|Q7ZYP6|MCMBP_XENLA Mini-chromosome maintenance complex-binding protein OS=Xenopus laevis GN=mcmbp PE=1 SV=1 4 421 7.0E-19
sp|B1H268|MCMBP_RAT Mini-chromosome maintenance complex-binding protein OS=Rattus norvegicus GN=Mcmbp PE=2 SV=1 155 405 9.0E-19
sp|Q8R3C0|MCMBP_MOUSE Mini-chromosome maintenance complex-binding protein OS=Mus musculus GN=Mcmbp PE=1 SV=1 155 405 1.0E-18
sp|Q9BTE3|MCMBP_HUMAN Mini-chromosome maintenance complex-binding protein OS=Homo sapiens GN=MCMBP PE=1 SV=2 155 405 4.0E-18
sp|Q803A6|MCMBP_DANRE Mini-chromosome maintenance complex-binding protein OS=Danio rerio GN=mcmbp PE=2 SV=2 155 460 2.0E-17
sp|A5PJM5|MCMBP_BOVIN Mini-chromosome maintenance complex-binding protein OS=Bos taurus GN=MCMBP PE=2 SV=1 155 405 3.0E-17
sp|Q9VM60|MCMBP_DROME Mini-chromosome maintenance complex-binding protein OS=Drosophila melanogaster GN=CG3430 PE=1 SV=1 156 405 1.0E-14
sp|O94450|YFF4_SCHPO UPF0616 protein C1687.04 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1687.04 PE=1 SV=1 68 405 2.0E-13
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GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 19 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Developmental stages of Agaricus bisporus (strain A15). Published in Pelkmans et al, Applied Microbiology and Biotechnology, 2016

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >AgabiH97|059530
MVSAPVADALLNPPHALAALFHPAAPLPAFPAVVAAHFAALFDPPAAFANIPALNVLHPPQLFSKNALVAFRAVV
QDTSPSPSIYLAKSPANTPGGWGLSVPDLQDPDPAHLAQCTVLWATSVPGESLWCTRQSTNLYQENKNGISPNPT
HPHKFPLPATSHIGVQVKIYDSTLADALKPSDLTTFVGILTKEPFFSQDFESSAEIDDVPTLHVLFARPTPPTII
PRTFPATFTPSELKTTRDALLTWIADESLGGDTHAAEWVLLSAIARTHSRTPPVYPPSLTISSFPAPSDASAKPT
LSHILSLLLPITCTLPLSLNTINETPFFPESKNEDLHSGWLQVPQGTLYLLTESGITEGSVRNKGLENLRAVQDM
MNGQTLDYVFPFSRFTFPTDVSFLVLAEGKKSAFFQTSNNVTLKPRSGMDLFKPLDKIRVPDEEVLEQWRDFIGG
SKIGTVTIEDGTATSKMTLLMNVK*
Coding >AgabiH97|059530
ATGGTCTCTGCTCCCGTAGCCGATGCTCTGCTCAATCCTCCCCACGCCCTCGCCGCCCTCTTCCACCCCGCAGCC
CCCCTTCCCGCCTTTCCCGCCGTAGTCGCCGCCCACTTTGCCGCCCTCTTCGACCCCCCCGCAGCCTTTGCCAAC
ATCCCCGCCCTCAACGTCCTCCACCCTCCGCAGCTCTTTTCTAAAAATGCCCTCGTCGCCTTTCGCGCCGTCGTC
CAGGACACCTCTCCCTCGCCTTCCATATATCTAGCAAAGTCTCCCGCCAACACGCCCGGCGGATGGGGTCTATCC
GTTCCAGATCTCCAAGACCCCGACCCTGCCCACCTCGCACAGTGCACTGTCCTCTGGGCCACTTCCGTCCCTGGG
GAATCTCTCTGGTGTACCCGCCAGTCTACTAATCTATACCAAGAAAATAAAAATGGCATTTCTCCAAACCCCACC
CATCCTCACAAGTTTCCCCTGCCTGCCACCTCCCATATCGGAGTCCAAGTCAAGATCTATGACTCTACTCTCGCC
GATGCTCTCAAGCCATCAGATCTCACCACTTTTGTAGGTATTCTTACAAAAGAGCCATTCTTCTCTCAAGACTTT
GAATCCTCGGCGGAGATCGACGATGTTCCTACGCTCCATGTTCTCTTCGCCCGTCCGACCCCGCCGACCATCATT
CCTCGTACCTTTCCTGCAACTTTTACCCCCTCTGAACTCAAAACAACCAGAGACGCGCTCCTAACTTGGATTGCG
GACGAAAGTCTAGGCGGTGACACGCATGCCGCTGAATGGGTTCTCCTCTCAGCAATCGCGAGAACACACTCTAGA
ACACCTCCTGTCTATCCTCCTTCGCTGACCATATCCTCCTTTCCAGCTCCCTCTGACGCATCGGCGAAACCAACT
CTCAGTCACATCCTCTCTCTCCTCCTTCCCATCACCTGCACACTTCCACTCTCCTTAAACACCATAAACGAAACA
CCTTTTTTCCCAGAATCCAAAAATGAAGATCTTCACAGTGGATGGCTTCAGGTTCCTCAAGGCACTCTTTACCTT
TTAACAGAGAGCGGTATCACCGAGGGAAGCGTTCGTAACAAGGGACTTGAGAATTTGCGAGCTGTCCAGGACATG
ATGAATGGGCAAACTCTTGACTATGTATTTCCTTTCAGTCGGTTCACCTTCCCCACCGATGTGAGCTTTCTAGTC
CTCGCGGAGGGAAAGAAAAGCGCTTTCTTCCAGACATCTAACAACGTGACTTTAAAACCGCGTAGTGGAATGGAC
TTGTTTAAACCACTTGACAAAATCAGAGTACCCGATGAAGAGGTTTTAGAACAATGGAGAGATTTCATCGGTGGC
AGCAAAATTGGGACTGTCACCATTGAAGATGGGACTGCTACATCCAAGATGACTTTGTTAATGAACGTAAAATAG
Transcript >AgabiH97|059530
ATGGTCTCTGCTCCCGTAGCCGATGCTCTGCTCAATCCTCCCCACGCCCTCGCCGCCCTCTTCCACCCCGCAGCC
CCCCTTCCCGCCTTTCCCGCCGTAGTCGCCGCCCACTTTGCCGCCCTCTTCGACCCCCCCGCAGCCTTTGCCAAC
ATCCCCGCCCTCAACGTCCTCCACCCTCCGCAGCTCTTTTCTAAAAATGCCCTCGTCGCCTTTCGCGCCGTCGTC
CAGGACACCTCTCCCTCGCCTTCCATATATCTAGCAAAGTCTCCCGCCAACACGCCCGGCGGATGGGGTCTATCC
GTTCCAGATCTCCAAGACCCCGACCCTGCCCACCTCGCACAGTGCACTGTCCTCTGGGCCACTTCCGTCCCTGGG
GAATCTCTCTGGTGTACCCGCCAGTCTACTAATCTATACCAAGAAAATAAAAATGGCATTTCTCCAAACCCCACC
CATCCTCACAAGTTTCCCCTGCCTGCCACCTCCCATATCGGAGTCCAAGTCAAGATCTATGACTCTACTCTCGCC
GATGCTCTCAAGCCATCAGATCTCACCACTTTTGTAGGTATTCTTACAAAAGAGCCATTCTTCTCTCAAGACTTT
GAATCCTCGGCGGAGATCGACGATGTTCCTACGCTCCATGTTCTCTTCGCCCGTCCGACCCCGCCGACCATCATT
CCTCGTACCTTTCCTGCAACTTTTACCCCCTCTGAACTCAAAACAACCAGAGACGCGCTCCTAACTTGGATTGCG
GACGAAAGTCTAGGCGGTGACACGCATGCCGCTGAATGGGTTCTCCTCTCAGCAATCGCGAGAACACACTCTAGA
ACACCTCCTGTCTATCCTCCTTCGCTGACCATATCCTCCTTTCCAGCTCCCTCTGACGCATCGGCGAAACCAACT
CTCAGTCACATCCTCTCTCTCCTCCTTCCCATCACCTGCACACTTCCACTCTCCTTAAACACCATAAACGAAACA
CCTTTTTTCCCAGAATCCAAAAATGAAGATCTTCACAGTGGATGGCTTCAGGTTCCTCAAGGCACTCTTTACCTT
TTAACAGAGAGCGGTATCACCGAGGGAAGCGTTCGTAACAAGGGACTTGAGAATTTGCGAGCTGTCCAGGACATG
ATGAATGGGCAAACTCTTGACTATGTATTTCCTTTCAGTCGGTTCACCTTCCCCACCGATGTGAGCTTTCTAGTC
CTCGCGGAGGGAAAGAAAAGCGCTTTCTTCCAGACATCTAACAACGTGACTTTAAAACCGCGTAGTGGAATGGAC
TTGTTTAAACCACTTGACAAAATCAGAGTACCCGATGAAGAGGTTTTAGAACAATGGAGAGATTTCATCGGTGGC
AGCAAAATTGGGACTGTCACCATTGAAGATGGGACTGCTACATCCAAGATGACTTTGTTAATGAACGTAAAATAG
Gene >AgabiH97|059530
ATGGTCTCTGCTCCCGTAGCCGATGCTCTGCTCAATCCTCCCCACGCCCTCGCCGCCCTCTTCCACCCCGCAGCC
CCCCTTCCCGCCTTTCCCGCCGTAGTCGCCGCCCACTTTGCCGCCCTCTTCGACCCCCCCGCAGCCTTTGCCAAC
ATCCCCGCCCTCAACGTCCTCCACCCTCCGCAGCTCTTTTCTAAAAATGCCCTCGTCGCCTTTCGCGCCGTCGTC
CAGGACACCTCTCCCTCGCCTTCCATATATCTAGCAAAGTCTCCCGCCAACACGCCCGGCGGATGGGGTCTATCC
GTTCCAGATCTCCAAGACCCCGACCCTGCCCACCTCGCACAGTGCACTGTCCTCTGGGCCACTTCCGTCCCTGGG
GAATCTCTCTGGTGTACCCGCCAGTCTACTAATCTATACCGTACGTCTAGGCACGCCCCTTACGTCCTCTCTGTG
ACGTCTTATTCTTTTATAGAAGAAAATAAAAATGGCATTTCTCCAAACCCCACCCATCCTCACAAGTTTCCCCTG
CCTGCCACCTCCCATATCGGAGTCCAAGTCAAGGTAAACCGACTCGTTTATCCGCCAGAGGGTGCACCTACCAAC
TCCCAAGCTAGATCTATGACTCTACTCTCGCCGATGCTCTCAAGCCATCAGATCTCACCACTTTTGTAGGTATTC
TTACAAAAGAGCCGTACGTCGCTTTCCCCCAATGTGCAACCTCACATCCTCACTGGTCACCAAGATTCTTCTCTC
AAGACTTTGAATCCTCGGCGGAGATCGACGATGTTCCTACGCTCCATGTTCTCTTCGCCCGTCCGACCCCGCCGA
CCATCATTCCTCGTACCTTTCCTGCAACTTTTACCCCCTCTGAACTCAAAACAACCAGAGACGCGCTCCTAACTT
GGATTGCGGACGAAAGTCTAGGCGGTGACACGCATGCCGCTGAATGGGTTCTCCTCTCAGCAATCGCGAGAACGT
ACGCTATTCTATATCATTACCGTTAACCGTCACCGACCTCATCTTCTAGACACTCTAGAACACCTCCTGTCTATC
CTCCTTCGCTGACCATATCCTCCTTTCCAGCTCCCTCTGACGCATCGGCGAAACCAACTCTCAGTCACATCCTCT
CTCTCCTCCTTCCCATCACCTGCACACTTCCACTCTCCTTAAACACCATAAACGAAACACCTTTTTTCCCAGAAT
CCAAAAATGAAGATCTTCACAGTGGATGGCTTCAGGTTCCTCAAGGCACTCTTTACCTTTTAACAGAGAGCGGTA
TCACCGAGGGAAGCGTTCGTAACAAGGGACTTGAGAATTTGCGAGCTGTCCAGGACATGATGAATGGGCAAACTC
TTGACTATGTATTTCCTTTCAGTCGGTTCACCTTCCCCACCGATGTGAGCTTTCTAGTCCTCGCGGAGGGAAAGA
AAAGCGCTTTCTTCCAGGTCCTAGTCCTTCCTCTTCCTCTCTCATGGACATTGCTTACCCTTCCTGCAGACATCT
AACAACGTGACTTTAAAACCGCGTAGTGGAATGGACTTGTTTAAACCACTTGACAAAATCAGAGTACCCGATGAA
GAGGTTTTAGAACAATGGAGAGATTTCATCGGTGGCAGCAAAATTGGGACTGTCACCATTGAAGATGGGACTGCG
TAAGTTGGTCTCTTCTTTGATGCTTCACTGAATGCAGCCATCTGAGCTATCTTGTTTAGTACATCCAAGATGACT
TTGTTAATGAACGTAAAATAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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