Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabiH97|058910
Gene name
Locationscaffold_3:1507765..1511699
Strand+
Gene length (bp)3934
Transcript length (bp)2817
Coding sequence length (bp)2817
Protein length (aa) 939

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF04086 SRP-alpha_N Signal recognition particle, alpha subunit, N-terminal 8.0E-47 312 585
PF00448 SRP54 SRP54-type protein, GTPase domain 1.1E-44 717 936
PF02881 SRP54_N SRP54-type protein, helical bundle domain 2.0E-09 610 679
PF00134 Cyclin_N Cyclin, N-terminal domain 1.6E-06 25 156

Swissprot hits

[Show all]
Swissprot ID Swissprot Description Start End E-value
sp|P08240|SRPR_HUMAN Signal recognition particle receptor subunit alpha OS=Homo sapiens GN=SRPR PE=1 SV=2 280 936 2.0E-134
sp|Q9DBG7|SRPR_MOUSE Signal recognition particle receptor subunit alpha OS=Mus musculus GN=Srpr PE=1 SV=1 280 936 1.0E-132
sp|Q3MHE8|SRPR_BOVIN Signal recognition particle receptor subunit alpha OS=Bos taurus GN=SRPR PE=2 SV=1 280 936 5.0E-132
sp|P06625|SRPR_CANLF Signal recognition particle receptor subunit alpha OS=Canis lupus familiaris GN=SRPR PE=2 SV=2 280 936 3.0E-131
sp|Q9U5L1|SRPR_DROME Signal recognition particle receptor subunit alpha homolog OS=Drosophila melanogaster GN=Gtp-bp PE=1 SV=2 598 936 3.0E-117
[Show all]
[Show less]
Swissprot ID Swissprot Description Start End E-value
sp|P08240|SRPR_HUMAN Signal recognition particle receptor subunit alpha OS=Homo sapiens GN=SRPR PE=1 SV=2 280 936 2.0E-134
sp|Q9DBG7|SRPR_MOUSE Signal recognition particle receptor subunit alpha OS=Mus musculus GN=Srpr PE=1 SV=1 280 936 1.0E-132
sp|Q3MHE8|SRPR_BOVIN Signal recognition particle receptor subunit alpha OS=Bos taurus GN=SRPR PE=2 SV=1 280 936 5.0E-132
sp|P06625|SRPR_CANLF Signal recognition particle receptor subunit alpha OS=Canis lupus familiaris GN=SRPR PE=2 SV=2 280 936 3.0E-131
sp|Q9U5L1|SRPR_DROME Signal recognition particle receptor subunit alpha homolog OS=Drosophila melanogaster GN=Gtp-bp PE=1 SV=2 598 936 3.0E-117
sp|Q54ZR7|SRPR_DICDI Signal recognition particle receptor subunit alpha OS=Dictyostelium discoideum GN=srpr PE=3 SV=1 617 936 2.0E-103
sp|O43032|SRPR_SCHPO Signal recognition particle receptor subunit alpha homolog OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=srp101 PE=3 SV=1 280 936 2.0E-91
sp|P32916|SRPR_YEAST Signal recognition particle receptor subunit alpha homolog OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SRP101 PE=1 SV=2 564 937 6.0E-87
sp|P27414|FTSY_SULAC Signal recognition particle receptor FtsY OS=Sulfolobus acidocaldarius (strain ATCC 33909 / DSM 639 / JCM 8929 / NBRC 15157 / NCIMB 11770) GN=ftsY PE=3 SV=1 621 923 4.0E-49
sp|Q5BKF8|CCNL2_XENTR Cyclin-L2 OS=Xenopus tropicalis GN=ccnl2 PE=2 SV=1 16 257 4.0E-47
sp|Q57739|FTSY_METJA Signal recognition particle receptor FtsY OS=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) GN=ftsY PE=3 SV=1 622 938 1.0E-46
sp|Q5ZJP9|CCNL1_CHICK Cyclin-L1 OS=Gallus gallus GN=CCNL1 PE=2 SV=1 14 251 1.0E-46
sp|Q9JJA7|CCNL2_MOUSE Cyclin-L2 OS=Mus musculus GN=Ccnl2 PE=1 SV=1 13 251 4.0E-46
sp|Q5I0H5|CCNL2_RAT Cyclin-L2 OS=Rattus norvegicus GN=Ccnl2 PE=1 SV=2 13 251 5.0E-46
sp|Q96S94|CCNL2_HUMAN Cyclin-L2 OS=Homo sapiens GN=CCNL2 PE=1 SV=1 13 251 7.0E-46
sp|Q6GN15|CCNL1_XENLA Cyclin-L1 OS=Xenopus laevis GN=ccnl1 PE=2 SV=2 13 251 3.0E-45
sp|Q8TIN7|FTSY_METAC Signal recognition particle receptor FtsY OS=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) GN=ftsY PE=3 SV=1 623 926 4.0E-45
sp|Q7ZVX0|CCNL1_DANRE Cyclin-L1 OS=Danio rerio GN=ccnl1 PE=1 SV=1 13 259 2.0E-44
sp|D4GYW6|FTSY_HALVD Signal recognition particle receptor FtsY OS=Haloferax volcanii (strain ATCC 29605 / DSM 3757 / JCM 8879 / NBRC 14742 / NCIMB 2012 / VKM B-1768 / DS2) GN=ftsY PE=3 SV=1 594 938 5.0E-42
sp|Q9R1Q2|CCNL1_RAT Cyclin-L1 OS=Rattus norvegicus GN=Ccnl1 PE=1 SV=1 13 251 3.0E-41
sp|Q52KE7|CCNL1_MOUSE Cyclin-L1 OS=Mus musculus GN=Ccnl1 PE=1 SV=1 13 251 4.0E-41
sp|Q9UK58|CCNL1_HUMAN Cyclin-L1 OS=Homo sapiens GN=CCNL1 PE=1 SV=1 13 251 7.0E-41
sp|Q9AS36|CCL11_ORYSJ Cyclin-L1-1 OS=Oryza sativa subsp. japonica GN=CYCL1-1 PE=2 SV=1 10 251 1.0E-37
sp|Q8RWV3|CCL11_ARATH Cyclin-L1-1 OS=Arabidopsis thaliana GN=CYCL1-1 PE=1 SV=2 13 251 6.0E-35
sp|Q9HJ93|FTSY_THEAC Signal recognition particle receptor FtsY OS=Thermoplasma acidophilum (strain ATCC 25905 / DSM 1728 / JCM 9062 / NBRC 15155 / AMRC-C165) GN=ftsY PE=3 SV=1 627 923 1.0E-30
sp|O07347|SRP54_THEAQ Signal recognition particle protein OS=Thermus aquaticus GN=ffh PE=1 SV=3 614 918 1.0E-26
sp|Q01442|SRP54_MYCMY Signal recognition particle protein OS=Mycoplasma mycoides GN=ffh PE=1 SV=1 623 923 2.0E-25
sp|P56005|SRP54_HELPY Signal recognition particle protein OS=Helicobacter pylori (strain ATCC 700392 / 26695) GN=ffh PE=3 SV=1 625 923 2.0E-25
sp|A9CHH2|FTSY_AGRFC Signal recognition particle receptor FtsY OS=Agrobacterium fabrum (strain C58 / ATCC 33970) GN=ftsY PE=3 SV=1 632 935 2.0E-25
sp|Q54431|SRP54_STRMU Signal recognition particle protein OS=Streptococcus mutans serotype c (strain ATCC 700610 / UA159) GN=ffh PE=3 SV=3 610 923 3.0E-25
sp|Q9ZK62|SRP54_HELPJ Signal recognition particle protein OS=Helicobacter pylori (strain J99 / ATCC 700824) GN=ffh PE=3 SV=1 625 923 3.0E-25
sp|P10121|FTSY_ECOLI Signal recognition particle receptor FtsY OS=Escherichia coli (strain K12) GN=ftsY PE=1 SV=1 698 937 2.0E-24
sp|O80842|CFTSY_ARATH Cell division protein FtsY homolog, chloroplastic OS=Arabidopsis thaliana GN=CPFTSY PE=1 SV=2 626 937 2.0E-24
sp|Q726P7|FTSY_DESVH Signal recognition particle receptor FtsY OS=Desulfovibrio vulgaris (strain Hildenborough / ATCC 29579 / NCIMB 8303) GN=ftsY PE=3 SV=1 715 937 5.0E-24
sp|Q2QQS5|CCT14_ORYSJ Cyclin-T1-4 OS=Oryza sativa subsp. japonica GN=CYCT1-1 PE=2 SV=1 17 256 1.0E-23
sp|O67615|SRP54_AQUAE Signal recognition particle protein OS=Aquifex aeolicus (strain VF5) GN=ffh PE=3 SV=1 610 936 1.0E-23
sp|Q9FKE6|CCT15_ARATH Cyclin-T1-5 OS=Arabidopsis thaliana GN=CYCT1-5 PE=1 SV=2 17 253 5.0E-23
sp|O94612|YFO5_SCHPO Uncharacterized cyclin-L1-like protein C1296.05c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1296.05c PE=3 SV=1 17 252 9.0E-23
sp|P37107|SR54C_ARATH Signal recognition particle 54 kDa protein, chloroplastic OS=Arabidopsis thaliana GN=FFC PE=1 SV=1 615 923 1.0E-22
sp|Q55311|SRP54_SYNE7 Signal recognition particle protein OS=Synechococcus elongatus (strain PCC 7942) GN=ffh PE=3 SV=1 616 936 2.0E-22
sp|O67066|FTSY_AQUAE Signal recognition particle receptor FtsY OS=Aquifex aeolicus (strain VF5) GN=ftsY PE=3 SV=1 712 937 2.0E-22
sp|Q8GYM6|CCT14_ARATH Cyclin-T1-4 OS=Arabidopsis thaliana GN=CYCT1-4 PE=1 SV=1 17 253 2.0E-22
sp|P49968|SR541_HORVU Signal recognition particle 54 kDa protein 1 OS=Hordeum vulgare GN=SRP54-1 PE=2 SV=1 608 936 3.0E-22
sp|P74214|SRP54_SYNY3 Signal recognition particle protein OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=ffh PE=3 SV=1 616 924 6.0E-22
sp|Q89AE4|SRP54_BUCBP Signal recognition particle protein OS=Buchnera aphidicola subsp. Baizongia pistaciae (strain Bp) GN=ffh PE=3 SV=1 610 923 2.0E-21
sp|P44870|FTSY_HAEIN Signal recognition particle receptor FtsY OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) GN=ftsY PE=3 SV=1 703 936 2.0E-21
sp|P49969|SR542_HORVU Signal recognition particle 54 kDa protein 2 OS=Hordeum vulgare GN=SRP54-2 PE=2 SV=1 608 936 2.0E-21
sp|Q8K9F7|SRP54_BUCAP Signal recognition particle protein OS=Buchnera aphidicola subsp. Schizaphis graminum (strain Sg) GN=ffh PE=3 SV=1 610 923 4.0E-21
sp|Q68XJ4|SRP54_RICTY Signal recognition particle protein OS=Rickettsia typhi (strain ATCC VR-144 / Wilmington) GN=ffh PE=3 SV=1 616 936 5.0E-21
sp|A3DML3|SRP54_STAMF Signal recognition particle 54 kDa protein OS=Staphylothermus marinus (strain ATCC 43588 / DSM 3639 / JCM 9404 / F1) GN=srp54 PE=3 SV=1 716 937 6.0E-21
sp|P57010|FTSY_NEIMA Signal recognition particle receptor FtsY OS=Neisseria meningitidis serogroup A / serotype 4A (strain Z2491) GN=ftsY PE=3 SV=1 703 936 7.0E-21
sp|O30391|FTSY_NEIMC Signal recognition particle receptor FtsY OS=Neisseria meningitidis serogroup C GN=ftsY PE=3 SV=1 703 936 7.0E-21
sp|P57011|FTSY_NEIMB Signal recognition particle receptor FtsY OS=Neisseria meningitidis serogroup B (strain MC58) GN=ftsY PE=3 SV=1 703 936 7.0E-21
sp|Q5JJC8|SRP54_THEKO Signal recognition particle 54 kDa protein OS=Thermococcus kodakarensis (strain ATCC BAA-918 / JCM 12380 / KOD1) GN=srp54 PE=3 SV=1 610 923 8.0E-21
sp|O74627|CG1C_SCHPO Cyclin pch1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=pch1 PE=1 SV=1 13 253 9.0E-21
sp|P20424|SRP54_YEAST Signal recognition particle subunit SRP54 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SRP54 PE=1 SV=2 631 936 1.0E-20
sp|C5A233|SRP54_THEGJ Signal recognition particle 54 kDa protein OS=Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) GN=srp54 PE=3 SV=1 610 923 1.0E-20
sp|O33013|SRP54_MYCLE Signal recognition particle protein OS=Mycobacterium leprae (strain TN) GN=ffh PE=3 SV=1 612 923 1.0E-20
sp|B6YSS1|SRP54_THEON Signal recognition particle 54 kDa protein OS=Thermococcus onnurineus (strain NA1) GN=srp54 PE=3 SV=1 708 923 2.0E-20
sp|O29633|SRP54_ARCFU Signal recognition particle 54 kDa protein OS=Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126) GN=srp54 PE=1 SV=1 669 936 2.0E-20
sp|Q8MZJ6|SRP54_GEOCY Signal recognition particle 54 kDa protein OS=Geodia cydonium GN=SRP54 PE=2 SV=1 718 936 2.0E-20
sp|P0AGD7|SRP54_ECOLI Signal recognition particle protein OS=Escherichia coli (strain K12) GN=ffh PE=1 SV=1 617 936 2.0E-20
sp|P0AGD8|SRP54_ECOL6 Signal recognition particle protein OS=Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) GN=ffh PE=3 SV=1 617 936 2.0E-20
sp|P0AGD9|SRP54_ECO57 Signal recognition particle protein OS=Escherichia coli O157:H7 GN=ffh PE=3 SV=1 617 936 2.0E-20
sp|P37105|SRP54_BACSU Signal recognition particle protein OS=Bacillus subtilis (strain 168) GN=ffh PE=1 SV=1 614 918 2.0E-20
sp|B9LT33|SRP54_HALLT Signal recognition particle 54 kDa protein OS=Halorubrum lacusprofundi (strain ATCC 49239 / DSM 5036 / JCM 8891 / ACAM 34) GN=srp54 PE=3 SV=1 607 936 3.0E-20
sp|Q2RAC5|CCT13_ORYSJ Cyclin-T1-3 OS=Oryza sativa subsp. japonica GN=CYCT1-3 PE=3 SV=2 19 253 3.0E-20
sp|Q3IUP1|SRP54_NATPD Signal recognition particle 54 kDa protein OS=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) GN=srp54 PE=3 SV=1 614 936 3.0E-20
sp|Q1RHD6|SRP54_RICBR Signal recognition particle protein OS=Rickettsia bellii (strain RML369-C) GN=ffh PE=3 SV=1 616 936 5.0E-20
sp|Q75K18|SRP54_DICDI Signal recognition particle 54 kDa protein OS=Dictyostelium discoideum GN=srp54 PE=1 SV=1 718 936 5.0E-20
sp|Q8U070|SRP54_PYRFU Signal recognition particle 54 kDa protein OS=Pyrococcus furiosus (strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1) GN=srp54 PE=1 SV=1 708 923 6.0E-20
sp|Q8KA77|FTSY_BUCAP Signal recognition particle receptor FtsY OS=Buchnera aphidicola subsp. Schizaphis graminum (strain Sg) GN=ftsY PE=3 SV=1 644 936 6.0E-20
sp|O59307|SRP54_PYRHO Signal recognition particle 54 kDa protein OS=Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3) GN=srp54 PE=3 SV=3 708 936 6.0E-20
sp|O05948|FTSY_RICPR Signal recognition particle receptor FtsY OS=Rickettsia prowazekii (strain Madrid E) GN=ftsY PE=3 SV=1 699 924 7.0E-20
sp|P21565|SRP54_SCHPO Signal recognition particle 54 kDa protein homolog OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=srp54 PE=1 SV=1 715 926 9.0E-20
sp|P49970|SR543_HORVU Signal recognition particle 54 kDa protein 3 OS=Hordeum vulgare GN=SRP54-3 PE=2 SV=1 607 936 1.0E-19
sp|Q92J55|SRP54_RICCN Signal recognition particle protein OS=Rickettsia conorii (strain ATCC VR-613 / Malish 7) GN=ffh PE=3 SV=1 616 936 1.0E-19
sp|Q68VX4|FTSY_RICTY Signal recognition particle receptor FtsY OS=Rickettsia typhi (strain ATCC VR-144 / Wilmington) GN=ftsY PE=3 SV=1 632 924 1.0E-19
sp|P37106|SR541_ARATH Signal recognition particle 54 kDa protein 1 OS=Arabidopsis thaliana GN=SRP-54A PE=2 SV=1 614 938 2.0E-19
sp|Q6MTB9|FTSY_MYCMS Signal recognition particle receptor FtsY OS=Mycoplasma mycoides subsp. mycoides SC (strain PG1) GN=ftsY PE=1 SV=1 720 923 2.0E-19
sp|P49972|SR542_SOLLC Signal recognition particle 54 kDa protein 2 OS=Solanum lycopersicum PE=2 SV=1 608 936 2.0E-19
sp|P57473|SRP54_BUCAI Signal recognition particle protein OS=Buchnera aphidicola subsp. Acyrthosiphon pisum (strain APS) GN=ffh PE=3 SV=1 610 923 2.0E-19
sp|A2STI3|SRP54_METLZ Signal recognition particle 54 kDa protein OS=Methanocorpusculum labreanum (strain ATCC 43576 / DSM 4855 / Z) GN=srp54 PE=3 SV=1 715 926 3.0E-19
sp|Q9ZDZ0|SRP54_RICPR Signal recognition particle protein OS=Rickettsia prowazekii (strain Madrid E) GN=ffh PE=3 SV=1 616 936 3.0E-19
sp|Q5R4R6|SRP54_PONAB Signal recognition particle 54 kDa protein OS=Pongo abelii GN=SRP54 PE=2 SV=1 718 936 3.0E-19
sp|Q4R965|SRP54_MACFA Signal recognition particle 54 kDa protein OS=Macaca fascicularis GN=SRP54 PE=2 SV=1 718 936 3.0E-19
sp|P61011|SRP54_HUMAN Signal recognition particle 54 kDa protein OS=Homo sapiens GN=SRP54 PE=1 SV=1 718 936 3.0E-19
sp|P61010|SRP54_CANLF Signal recognition particle 54 kDa protein OS=Canis lupus familiaris GN=SRP54 PE=1 SV=1 718 936 3.0E-19
sp|Q2T9U1|SRP54_BOVIN Signal recognition particle 54 kDa protein OS=Bos taurus GN=SRP54 PE=2 SV=1 718 936 3.0E-19
sp|P44518|SRP54_HAEIN Signal recognition particle protein OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) GN=ffh PE=3 SV=1 617 936 4.0E-19
sp|P14576|SRP54_MOUSE Signal recognition particle 54 kDa protein OS=Mus musculus GN=Srp54 PE=1 SV=2 718 936 4.0E-19
sp|Q6Z7H3|CCT12_ORYSJ Cyclin-T1-2 OS=Oryza sativa subsp. japonica GN=CYCT1_2 PE=2 SV=2 15 236 5.0E-19
sp|Q6AYB5|SRP54_RAT Signal recognition particle 54 kDa protein OS=Rattus norvegicus GN=Srp54 PE=2 SV=1 718 936 6.0E-19
sp|Q1RKK5|FTSY_RICBR Signal recognition particle receptor FtsY OS=Rickettsia bellii (strain RML369-C) GN=ftsY PE=3 SV=1 703 924 6.0E-19
sp|P49967|SR543_ARATH Signal recognition particle 54 kDa protein 3 OS=Arabidopsis thaliana GN=SRP-54C PE=2 SV=2 614 936 7.0E-19
sp|P49971|SR541_SOLLC Signal recognition particle 54 kDa protein 1 OS=Solanum lycopersicum PE=3 SV=1 608 936 7.0E-19
sp|P14929|FTSY_NEIGO Signal recognition particle receptor FtsY OS=Neisseria gonorrhoeae GN=ftsY PE=1 SV=2 703 924 8.0E-19
sp|Q4UKH4|SRP54_RICFE Signal recognition particle protein OS=Rickettsia felis (strain ATCC VR-1525 / URRWXCal2) GN=ffh PE=3 SV=2 616 936 1.0E-18
sp|Q5RD50|CCNL1_PONAB Cyclin-L1 OS=Pongo abelii GN=CCNL1 PE=3 SV=1 13 108 1.0E-18
sp|B1Y9L4|SRP54_PYRNV Signal recognition particle 54 kDa protein OS=Pyrobaculum neutrophilum (strain DSM 2338 / JCM 9278 / V24Sta) GN=srp54 PE=3 SV=1 609 923 1.0E-18
sp|Q4UK46|FTSY_RICFE Signal recognition particle receptor FtsY OS=Rickettsia felis (strain ATCC VR-1525 / URRWXCal2) GN=ftsY PE=3 SV=1 699 924 1.0E-18
sp|O27376|SRP54_METTH Signal recognition particle 54 kDa protein OS=Methanothermobacter thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330 / Delta H) GN=srp54 PE=3 SV=1 715 923 2.0E-18
sp|P51835|FTSY_BACSU Signal recognition particle receptor FtsY OS=Bacillus subtilis (strain 168) GN=ftsY PE=1 SV=2 718 938 2.0E-18
sp|D3UJA7|FTSY_HELM1 Signal recognition particle receptor FtsY OS=Helicobacter mustelae (strain ATCC 43772 / LMG 18044 / NCTC 12198 / 12198) GN=ftsY PE=3 SV=1 635 936 2.0E-18
sp|P47294|SRP54_MYCGE Signal recognition particle protein OS=Mycoplasma genitalium (strain ATCC 33530 / G-37 / NCTC 10195) GN=ffh PE=3 SV=1 610 936 2.0E-18
sp|Q8ZT95|SRP54_PYRAE Signal recognition particle 54 kDa protein OS=Pyrobaculum aerophilum (strain ATCC 51768 / IM2 / DSM 7523 / JCM 9630 / NBRC 100827) GN=srp54 PE=3 SV=1 610 936 2.0E-18
sp|Q9HMN5|SRP54_HALSA Signal recognition particle 54 kDa protein OS=Halobacterium salinarum (strain ATCC 700922 / JCM 11081 / NRC-1) GN=srp54 PE=3 SV=1 617 936 3.0E-18
sp|B0R7X3|SRP54_HALS3 Signal recognition particle 54 kDa protein OS=Halobacterium salinarum (strain ATCC 29341 / DSM 671 / R1) GN=srp54 PE=3 SV=1 617 936 3.0E-18
sp|Q8THD0|SRP54_METAC Signal recognition particle 54 kDa protein OS=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) GN=srp54 PE=3 SV=1 712 936 8.0E-18
sp|P9WGD7|SRP54_MYCTU Signal recognition particle protein OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) GN=ffh PE=1 SV=1 715 923 9.0E-18
sp|P9WGD6|SRP54_MYCTO Signal recognition particle protein OS=Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh) GN=ffh PE=3 SV=1 715 923 9.0E-18
sp|P66845|SRP54_MYCBO Signal recognition particle protein OS=Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97) GN=ffh PE=3 SV=1 715 923 9.0E-18
sp|Q9V1E8|SRP54_PYRAB Signal recognition particle 54 kDa protein OS=Pyrococcus abyssi (strain GE5 / Orsay) GN=srp54 PE=3 SV=1 708 936 9.0E-18
sp|O42816|SRP54_CANAX Signal recognition particle 54 kDa protein homolog OS=Candida albicans GN=SRP54 PE=2 SV=1 567 936 9.0E-18
sp|A1RS43|SRP54_PYRIL Signal recognition particle 54 kDa protein OS=Pyrobaculum islandicum (strain DSM 4184 / JCM 9189 / GEO3) GN=srp54 PE=3 SV=1 609 918 1.0E-17
sp|Q99150|SRP54_YARLI Signal recognition particle 54 kDa protein homolog OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=SRP54 PE=3 SV=2 718 936 1.0E-17
sp|O32861|FTSY_MYCHP Signal recognition particle receptor FtsY OS=Mycoplasma hominis (strain ATCC 23114 / NBRC 14850 / NCTC 10111 / PG21) GN=ftsY PE=3 SV=1 718 926 1.0E-17
sp|Q00179|SRP54_ASPNG Signal recognition particle 54 kDa protein homolog OS=Aspergillus niger GN=srpA PE=3 SV=1 674 936 1.0E-17
sp|O15821|SRP54_ENTHI Signal recognition particle 54 kDa protein OS=Entamoeba histolytica PE=3 SV=1 718 936 1.0E-17
sp|Q18EV2|SRP54_HALWD Signal recognition particle 54 kDa protein OS=Haloquadratum walsbyi (strain DSM 16790 / HBSQ001) GN=srp54 PE=3 SV=1 611 936 2.0E-17
sp|Q6NRK9|FA58A_XENLA Cyclin-related protein FAM58A OS=Xenopus laevis GN=fam58a PE=2 SV=2 38 233 2.0E-17
sp|Q92GB8|FTSY_RICCN Signal recognition particle receptor FtsY OS=Rickettsia conorii (strain ATCC VR-613 / Malish 7) GN=ftsY PE=3 SV=1 699 924 2.0E-17
sp|A0B638|SRP54_METTP Signal recognition particle 54 kDa protein OS=Methanosaeta thermophila (strain DSM 6194 / JCM 14653 / NBRC 101360 / PT) GN=srp54 PE=3 SV=1 717 936 3.0E-17
sp|P75054|SRP54_MYCPN Signal recognition particle protein OS=Mycoplasma pneumoniae (strain ATCC 29342 / M129) GN=ffh PE=3 SV=1 619 936 3.0E-17
sp|A2BNB5|SRP54_HYPBU Signal recognition particle 54 kDa protein OS=Hyperthermus butylicus (strain DSM 5456 / JCM 9403 / PLM1-5) GN=srp54 PE=3 SV=1 715 937 4.0E-17
sp|Q46E01|SRP54_METBF Signal recognition particle 54 kDa protein OS=Methanosarcina barkeri (strain Fusaro / DSM 804) GN=srp54 PE=3 SV=1 712 936 4.0E-17
sp|Q971S9|SRP54_SULTO Signal recognition particle 54 kDa protein OS=Sulfolobus tokodaii (strain DSM 16993 / JCM 10545 / NBRC 100140 / 7) GN=srp54 PE=3 SV=2 712 936 4.0E-17
sp|Q0E474|CCT11_ORYSJ Cyclin-T1-1 OS=Oryza sativa subsp. japonica GN=CYCT1-1 PE=3 SV=2 15 294 6.0E-17
sp|Q8CWX8|FTSY_STRMU Signal recognition particle receptor FtsY OS=Streptococcus mutans serotype c (strain ATCC 700610 / UA159) GN=ftsY PE=3 SV=1 720 936 6.0E-17
sp|P57137|FTSY_BUCAI Signal recognition particle receptor FtsY OS=Buchnera aphidicola subsp. Acyrthosiphon pisum (strain APS) GN=ftsY PE=3 SV=1 644 937 6.0E-17
sp|A5UMY7|SRP54_METS3 Signal recognition particle 54 kDa protein OS=Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM 861) GN=srp54 PE=3 SV=2 715 936 7.0E-17
sp|C3MPN4|SRP54_SULIL Signal recognition particle 54 kDa protein OS=Sulfolobus islandicus (strain L.S.2.15 / Lassen #1) GN=srp54 PE=3 SV=1 713 936 7.0E-17
sp|A4YHL0|SRP54_METS5 Signal recognition particle 54 kDa protein OS=Metallosphaera sedula (strain ATCC 51363 / DSM 5348) GN=srp54 PE=3 SV=1 714 937 8.0E-17
sp|A4WLQ3|SRP54_PYRAR Signal recognition particle 54 kDa protein OS=Pyrobaculum arsenaticum (strain DSM 13514 / JCM 11321) GN=srp54 PE=3 SV=1 713 923 8.0E-17
sp|Q8PXF3|SRP54_METMA Signal recognition particle 54 kDa protein OS=Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) GN=srp54 PE=3 SV=1 712 936 9.0E-17
sp|Q977V2|SRP54_HALVD Signal recognition particle 54 kDa protein OS=Haloferax volcanii (strain ATCC 29605 / DSM 3757 / JCM 8879 / NBRC 14742 / NCIMB 2012 / VKM B-1768 / DS2) GN=srp54 PE=1 SV=1 611 936 1.0E-16
sp|C3NHT9|SRP54_SULIN Signal recognition particle 54 kDa protein OS=Sulfolobus islandicus (strain Y.N.15.51 / Yellowstone #2) GN=srp54 PE=3 SV=1 713 936 2.0E-16
sp|C3NDW4|SRP54_SULIY Signal recognition particle 54 kDa protein OS=Sulfolobus islandicus (strain Y.G.57.14 / Yellowstone #1) GN=srp54 PE=3 SV=1 713 936 2.0E-16
sp|Q57565|SRP54_METJA Signal recognition particle 54 kDa protein OS=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) GN=srp54 PE=1 SV=1 718 923 2.0E-16
sp|Q97ZE7|SRP54_SULSO Signal recognition particle 54 kDa protein OS=Sulfolobus solfataricus (strain ATCC 35092 / DSM 1617 / JCM 11322 / P2) GN=srp54 PE=1 SV=1 713 936 2.0E-16
sp|Q8TUY9|SRP54_METKA Signal recognition particle 54 kDa protein OS=Methanopyrus kandleri (strain AV19 / DSM 6324 / JCM 9639 / NBRC 100938) GN=srp54 PE=3 SV=1 718 937 2.0E-16
sp|C3MYM8|SRP54_SULIM Signal recognition particle 54 kDa protein OS=Sulfolobus islandicus (strain M.14.25 / Kamchatka #1) GN=srp54 PE=3 SV=1 713 936 3.0E-16
sp|C4KGX6|SRP54_SULIK Signal recognition particle 54 kDa protein OS=Sulfolobus islandicus (strain M.16.4 / Kamchatka #3) GN=srp54 PE=3 SV=1 713 936 3.0E-16
sp|C3N5B0|SRP54_SULIA Signal recognition particle 54 kDa protein OS=Sulfolobus islandicus (strain M.16.27) GN=srp54 PE=3 SV=1 713 936 3.0E-16
sp|Q89B28|FTSY_BUCBP Signal recognition particle receptor FtsY OS=Buchnera aphidicola subsp. Baizongia pistaciae (strain Bp) GN=ftsY PE=3 SV=1 699 938 4.0E-16
sp|Q5UY20|SRP54_HALMA Signal recognition particle 54 kDa protein OS=Haloarcula marismortui (strain ATCC 43049 / DSM 3752 / JCM 8966 / VKM B-1809) GN=srp54 PE=3 SV=1 704 936 5.0E-16
sp|P47539|FTSY_MYCGE Signal recognition particle receptor FtsY OS=Mycoplasma genitalium (strain ATCC 33530 / G-37 / NCTC 10195) GN=ftsY PE=3 SV=1 606 923 7.0E-16
sp|Q2NE47|SRP54_METST Signal recognition particle 54 kDa protein OS=Methanosphaera stadtmanae (strain ATCC 43021 / DSM 3091 / JCM 11832 / MCB-3) GN=srp54 PE=3 SV=1 639 923 8.0E-16
sp|Q8N1B3|FA58A_HUMAN Cyclin-related protein FAM58A OS=Homo sapiens GN=FAM58A PE=1 SV=2 38 234 2.0E-15
sp|Q6LX03|SRP54_METMP Signal recognition particle 54 kDa protein OS=Methanococcus maripaludis (strain S2 / LL) GN=srp54 PE=3 SV=1 642 926 2.0E-15
sp|A6VHE0|SRP54_METM7 Signal recognition particle 54 kDa protein OS=Methanococcus maripaludis (strain C7 / ATCC BAA-1331) GN=srp54 PE=3 SV=1 642 936 2.0E-15
sp|P75362|FTSY_MYCPN Signal recognition particle receptor FtsY OS=Mycoplasma pneumoniae (strain ATCC 29342 / M129) GN=ftsY PE=3 SV=1 648 923 3.0E-15
sp|A4FVX4|SRP54_METM5 Signal recognition particle 54 kDa protein OS=Methanococcus maripaludis (strain C5 / ATCC BAA-1333) GN=srp54 PE=3 SV=1 642 926 3.0E-15
sp|A6UQJ8|SRP54_METVS Signal recognition particle 54 kDa protein OS=Methanococcus vannielii (strain SB / ATCC 35089 / DSM 1224) GN=srp54 PE=3 SV=1 718 924 3.0E-15
sp|A3MWX6|SRP54_PYRCJ Signal recognition particle 54 kDa protein OS=Pyrobaculum calidifontis (strain JCM 11548 / VA1) GN=srp54 PE=3 SV=1 609 918 4.0E-15
sp|Q12ZG8|SRP54_METBU Signal recognition particle 54 kDa protein OS=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) GN=srp54 PE=3 SV=1 715 936 4.0E-15
sp|A9A9B0|SRP54_METM6 Signal recognition particle 54 kDa protein OS=Methanococcus maripaludis (strain C6 / ATCC BAA-1332) GN=srp54 PE=3 SV=1 642 936 5.0E-15
sp|P73930|FTSY_SYNY3 Signal recognition particle receptor FtsY OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=ftsY PE=3 SV=1 720 937 6.0E-15
sp|Q9RS67|FTSY_DEIRA Signal recognition particle receptor FtsY OS=Deinococcus radiodurans (strain ATCC 13939 / DSM 20539 / JCM 16871 / LMG 4051 / NBRC 15346 / NCIMB 9279 / R1 / VKM B-1422) GN=ftsY PE=3 SV=1 632 936 7.0E-15
sp|P70722|SRP54_ACIAM Signal recognition particle 54 kDa protein (Fragment) OS=Acidianus ambivalens GN=srp54 PE=1 SV=2 713 936 7.0E-15
sp|Q4QQW5|FA58A_RAT Cyclin-related protein FAM58A OS=Rattus norvegicus GN=Fam58a PE=2 SV=1 38 233 1.0E-14
sp|Q9ZL80|FTSY_HELPJ Signal recognition particle receptor FtsY OS=Helicobacter pylori (strain J99 / ATCC 700824) GN=ftsY PE=3 SV=1 637 923 1.0E-14
sp|Q9YB62|SRP54_AERPE Signal recognition particle 54 kDa protein OS=Aeropyrum pernix (strain ATCC 700893 / DSM 11879 / JCM 9820 / NBRC 100138 / K1) GN=srp54 PE=3 SV=1 713 937 1.0E-14
sp|Q8QZR8|FA58B_MOUSE Cyclin-related protein FAM58B OS=Mus musculus GN=Fam58b PE=2 SV=2 17 233 1.0E-14
sp|Q9Z6T7|FTSY_CHLPN Signal recognition particle receptor FtsY OS=Chlamydia pneumoniae GN=ftsY PE=3 SV=1 637 926 1.0E-14
sp|O07853|SRP54_SULAC Signal recognition particle 54 kDa protein OS=Sulfolobus acidocaldarius (strain ATCC 33909 / DSM 639 / JCM 8929 / NBRC 15157 / NCIMB 11770) GN=srp54 PE=3 SV=2 712 923 2.0E-14
sp|A6UWG4|SRP54_META3 Signal recognition particle 54 kDa protein OS=Methanococcus aeolicus (strain Nankai-3 / ATCC BAA-1280) GN=srp54 PE=3 SV=1 718 924 2.0E-14
sp|Q9C8P7|CCT11_ARATH Putative cyclin-T1-1 OS=Arabidopsis thaliana GN=CYCT1-1 PE=3 SV=1 15 251 5.0E-14
sp|O25458|FTSY_HELPY Signal recognition particle receptor FtsY OS=Helicobacter pylori (strain ATCC 700392 / 26695) GN=ftsY PE=3 SV=1 715 923 5.0E-14
sp|Q0W2G1|SRP54_METAR Signal recognition particle 54 kDa protein OS=Methanocella arvoryzae (strain DSM 22066 / NBRC 105507 / MRE50) GN=srp54 PE=3 SV=1 717 926 6.0E-14
sp|O88874|CCNK_MOUSE Cyclin-K OS=Mus musculus GN=Ccnk PE=1 SV=3 14 253 8.0E-14
sp|O60563|CCNT1_HUMAN Cyclin-T1 OS=Homo sapiens GN=CCNT1 PE=1 SV=1 10 235 9.0E-14
sp|Q8HXN7|CCNT1_PANTR Cyclin-T1 OS=Pan troglodytes GN=CCNT1 PE=2 SV=1 10 235 1.0E-13
sp|P49966|SR542_ARATH Signal recognition particle 54 kDa protein 2 OS=Arabidopsis thaliana GN=SRP-54B PE=3 SV=2 608 918 2.0E-13
sp|Q6T8E9|CCNT1_BOVIN Cyclin-T1 OS=Bos taurus GN=CCNT1 PE=1 SV=1 10 235 2.0E-13
sp|O75909|CCNK_HUMAN Cyclin-K OS=Homo sapiens GN=CCNK PE=1 SV=2 14 253 2.0E-13
sp|Q9XT26|CCNT1_HORSE Cyclin-T1 OS=Equus caballus GN=CCNT1 PE=1 SV=1 10 235 2.0E-13
sp|P83749|FTSY_THEAQ Signal recognition particle receptor FtsY OS=Thermus aquaticus GN=ftsY PE=1 SV=2 727 938 6.0E-13
sp|Q503D6|FA58A_DANRE Cyclin-related protein FAM58A OS=Danio rerio GN=fam58a PE=2 SV=1 37 169 7.0E-13
sp|Q9QWV9|CCNT1_MOUSE Cyclin-T1 OS=Mus musculus GN=Ccnt1 PE=1 SV=3 10 235 3.0E-12
sp|P0C7Q3|FA58B_HUMAN Putative cyclin-related protein FAM58B OS=Homo sapiens GN=FAM58BP PE=5 SV=1 38 233 2.0E-11
sp|Q8G736|FTSY_BIFLO Signal recognition particle receptor FtsY OS=Bifidobacterium longum (strain NCC 2705) GN=ftsY PE=3 SV=1 715 937 2.0E-11
sp|O60583|CCNT2_HUMAN Cyclin-T2 OS=Homo sapiens GN=CCNT2 PE=1 SV=2 10 234 2.0E-11
sp|Q86KE7|CCNC_DICDI Cyclin-C OS=Dictyostelium discoideum GN=cycC PE=3 SV=1 17 251 3.0E-11
sp|Q979Y8|SRP54_THEVO Signal recognition particle 54 kDa protein OS=Thermoplasma volcanium (strain ATCC 51530 / DSM 4299 / JCM 9571 / NBRC 15438 / GSS1) GN=srp54 PE=3 SV=1 708 923 4.0E-11
sp|O33010|FTSY_MYCLE Signal recognition particle receptor FtsY OS=Mycobacterium leprae (strain TN) GN=ftsY PE=3 SV=1 637 936 1.0E-10
sp|Q9HKT0|SRP54_THEAC Signal recognition particle 54 kDa protein OS=Thermoplasma acidophilum (strain ATCC 25905 / DSM 1728 / JCM 9062 / NBRC 15155 / AMRC-C165) GN=srp54 PE=3 SV=1 708 923 2.0E-10
sp|P9WGD9|FTSY_MYCTU Signal recognition particle receptor FtsY OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) GN=ftsY PE=1 SV=1 715 936 7.0E-10
sp|P9WGD8|FTSY_MYCTO Signal recognition particle receptor FtsY OS=Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh) GN=ftsY PE=3 SV=1 715 936 7.0E-10
sp|P66843|FTSY_MYCBO Signal recognition particle receptor FtsY OS=Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97) GN=ftsY PE=3 SV=1 715 936 7.0E-10
sp|Q56YF8|CCT12_ARATH Cyclin-T1-2 OS=Arabidopsis thaliana GN=CYCT1-2 PE=2 SV=2 15 201 8.0E-09
sp|Q5A4H9|SSN8_CANAL RNA polymerase II holoenzyme cyclin-like subunit OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=SSN8 PE=3 SV=1 31 214 1.0E-08
sp|Q8LBC0|CCT13_ARATH Cyclin-T1-3 OS=Arabidopsis thaliana GN=CYCT1-3 PE=1 SV=2 15 212 5.0E-08
sp|O96433|CCNT_DROME Cyclin-T OS=Drosophila melanogaster GN=CycT PE=1 SV=2 13 215 9.0E-08
sp|A3LPX1|SSN8_PICST RNA polymerase II holoenzyme cyclin-like subunit OS=Scheffersomyces stipitis (strain ATCC 58785 / CBS 6054 / NBRC 10063 / NRRL Y-11545) GN=SSN8 PE=3 SV=2 26 214 2.0E-07
sp|Q75AX7|SSN8_ASHGO RNA polymerase II holoenzyme cyclin-like subunit OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=SSN8 PE=3 SV=2 27 214 2.0E-07
sp|O67266|FLHF_AQUAE Flagellar biosynthesis protein FlhF OS=Aquifex aeolicus (strain VF5) GN=flhF PE=3 SV=1 637 919 3.0E-07
sp|Q9HE63|SSN8_NEUCR RNA polymerase II holoenzyme cyclin-like subunit OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=ssn8 PE=3 SV=2 32 214 3.0E-07
sp|P47821|SSN8_YEAST RNA polymerase II holoenzyme cyclin-like subunit OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SSN8 PE=1 SV=1 27 214 3.0E-07
sp|Q6CP20|SSN8_KLULA RNA polymerase II holoenzyme cyclin-like subunit OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=SSN8 PE=3 SV=1 18 214 6.0E-07
sp|Q4WZT9|SSN8_ASPFU RNA polymerase II holoenzyme cyclin-like subunit OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=ssn8 PE=3 SV=1 32 214 3.0E-06
sp|Q5BBA8|SSN8_EMENI RNA polymerase II holoenzyme cyclin-like subunit OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=ssn8 PE=3 SV=2 32 214 4.0E-06
sp|Q4KLA0|CCNC_XENLA Cyclin-C OS=Xenopus laevis GN=ccnc PE=2 SV=1 32 268 4.0E-06
sp|P55168|CCNC_CHICK Cyclin-C OS=Gallus gallus GN=CCNC PE=3 SV=1 32 268 4.0E-06
sp|P24863|CCNC_HUMAN Cyclin-C OS=Homo sapiens GN=CCNC PE=1 SV=2 32 268 6.0E-06
sp|Q3ZCK5|CCNC_BOVIN Cyclin-C OS=Bos taurus GN=CCNC PE=2 SV=1 32 268 8.0E-06
sp|P39947|CCNC_RAT Cyclin-C OS=Rattus norvegicus GN=Ccnc PE=2 SV=2 32 268 1.0E-05
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GO

GO Term Description Terminal node
GO:0005525 GTP binding Yes
GO:0006886 intracellular protein transport Yes
GO:0003924 GTPase activity Yes
GO:0006614 SRP-dependent cotranslational protein targeting to membrane Yes
GO:0005785 signal recognition particle receptor complex Yes
GO:0005047 signal recognition particle binding Yes
GO:0045184 establishment of protein localization No
GO:0016462 pyrophosphatase activity No
GO:0006613 cotranslational protein targeting to membrane No
GO:0008150 biological_process No
GO:0043168 anion binding No
GO:0098796 membrane protein complex No
GO:0043167 ion binding No
GO:0097159 organic cyclic compound binding No
GO:0006612 protein targeting to membrane No
GO:0051641 cellular localization No
GO:0017111 nucleoside-triphosphatase activity No
GO:0006810 transport No
GO:0070727 cellular macromolecule localization No
GO:0005575 cellular_component No
GO:0044877 protein-containing complex binding No
GO:0005488 binding No
GO:0051234 establishment of localization No
GO:0016787 hydrolase activity No
GO:1901363 heterocyclic compound binding No
GO:0033365 protein localization to organelle No
GO:0072657 protein localization to membrane No
GO:0019001 guanyl nucleotide binding No
GO:0071705 nitrogen compound transport No
GO:0036094 small molecule binding No
GO:0032561 guanyl ribonucleotide binding No
GO:0015031 protein transport No
GO:0070972 protein localization to endoplasmic reticulum No
GO:0090150 establishment of protein localization to membrane No
GO:0000166 nucleotide binding No
GO:0045047 protein targeting to ER No
GO:0051179 localization No
GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides No
GO:0051668 localization within membrane No
GO:0051649 establishment of localization in cell No
GO:0032555 purine ribonucleotide binding No
GO:0016817 hydrolase activity, acting on acid anhydrides No
GO:0003824 catalytic activity No
GO:0009987 cellular process No
GO:0072594 establishment of protein localization to organelle No
GO:0043021 ribonucleoprotein complex binding No
GO:0032553 ribonucleotide binding No
GO:0097367 carbohydrate derivative binding No
GO:1901265 nucleoside phosphate binding No
GO:0032991 protein-containing complex No
GO:0003674 molecular_function No
GO:0033036 macromolecule localization No
GO:0046907 intracellular transport No
GO:0006605 protein targeting No
GO:0071702 organic substance transport No
GO:0140534 endoplasmic reticulum protein-containing complex No
GO:0072599 establishment of protein localization to endoplasmic reticulum No
GO:0008104 protein localization No
GO:0017076 purine nucleotide binding No
GO:0035639 purine ribonucleoside triphosphate binding No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 24 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Developmental stages of Agaricus bisporus (strain A15). Published in Pelkmans et al, Applied Microbiology and Biotechnology, 2016

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >AgabiH97|058910
MVPALPPLATLSQLRLSPSQQDAIPPDLEEDLRTYGCKLIHQAGILLAQKQVAVATAQILFQRFWYVSSLKNFGV
ADIGMGALYLASKLEECPIRMRDLINVYDVLLQRAAHSISPKADTPFKYYPMSYFGTSFYDLKEALVVAEMQVLK
RLGFDVHVVLPYGTLVNYLQVLGLIKHGTACTRAWGYLNDAFQTPVYALYQVPTIVCAAILLTVRHLGLSLPSEA
PHCWWELFDAAWEDMWSVCGYIMRLYRERGAEERRRVLGLVAKKDVRRWLDTFSMLDHCSISHKGGLVLWSRSFT
PAAAQLASSPVSPVNSLIRDALIEGRTTDEKYEKDGYAVKWTFVNDLELIFVVAYQRILQLTYVDELLLALKTLF
VKYYEPVIATFVASLHTLNSAKATALEPTTWNFAKLFEKWDSTFDSVLRSLEDKDRRSRGRAIIRSAPVPVETPS
SDDQSTDPTVDVDAPKDEQQIARNLQTLKNRLRGRGGRRGARGGRQVMMEGFGGRESQSNSESEAPTKRKNKTKV
GRTWGDSHPTEQDMEALDYSADRPIDGSGRVTEDVQTLVDQSSLGSRNRDGLYEVKDWEFSKDHNDVLAKVIESK
PDPSSSLGTFGSLIARLTGSKVLTEADLKPILDGMEQHLMKKNVAKEIAEKICESVGENLVGRKVGGFETTNAAV
RKALSTSITRILTPKTSTDLLLSIRTKLSSPLPSTQQRMPYSITFVGVNGVGKSTNLSKVCFWLIQNGLRVLIAA
CDTFRSGAVEQLRVHVRNLSMLGVNGAGDSKGRVELYEKGYGKDAAAIAKEAITYARDNDFDVVLIDTAGRMQDN
EPLMRALAKLVATNNPDKIIFVGEALVGNEAVDQLTKFDRALRDFSSASGVGKGRGIDGMLVTKWDTVDDKVGAA
LSMTYVTGQPIIFVGCGQTYTDLRQLKVANVVQAILSE*
Coding >AgabiH97|058910
ATGGTCCCTGCCTTGCCTCCCCTCGCCACCCTCTCCCAGCTCAGACTCTCCCCGTCCCAGCAGGATGCCATTCCT
CCAGACCTCGAGGAGGATCTCCGCACCTATGGCTGCAAGCTCATCCACCAGGCCGGCATTCTCTTGGCCCAGAAA
CAGGTCGCTGTTGCTACGGCGCAGATCCTCTTTCAGAGATTTTGGTATGTCAGTTCACTGAAAAACTTTGGTGTA
GCGGACATTGGGATGGGTGCATTGTATCTCGCTTCGAAATTGGAAGAGTGTCCCATACGCATGCGGGACCTGATC
AATGTCTACGACGTCTTGCTCCAGCGAGCAGCGCACTCGATTAGCCCCAAAGCGGATACACCATTCAAGTACTAC
CCCATGTCCTACTTTGGCACTTCATTCTACGATCTCAAAGAAGCGCTCGTGGTTGCCGAGATGCAGGTTCTGAAG
CGACTGGGGTTTGACGTGCACGTTGTGCTTCCATATGGCACGCTTGTCAATTATCTCCAAGTGCTTGGACTCATC
AAACACGGAACTGCATGCACGAGGGCATGGGGGTACCTTAATGATGCATTCCAGACGCCGGTGTATGCACTGTAC
CAAGTGCCGACGATTGTGTGCGCGGCGATTCTGCTGACGGTGCGGCACCTGGGGCTGTCGCTGCCGTCGGAGGCG
CCACACTGCTGGTGGGAGCTGTTCGACGCGGCATGGGAGGACATGTGGAGTGTATGTGGGTACATCATGCGGCTG
TACCGGGAACGCGGGGCTGAGGAACGGCGACGAGTGCTTGGTCTCGTTGCGAAAAAGGACGTGCGGCGGTGGCTC
GATACCTTCTCAATGCTCGACCACTGCTCCATCTCCCACAAAGGTGGCCTTGTGCTCTGGTCTCGCTCCTTTACC
CCTGCCGCCGCACAGCTCGCCTCGTCACCCGTCTCCCCAGTCAATTCCCTCATCCGCGATGCCCTCATCGAAGGT
AGAACAACGGATGAAAAATACGAAAAGGATGGCTACGCCGTCAAATGGACCTTTGTCAACGACCTCGAGCTCATC
TTTGTCGTCGCATATCAGCGCATCCTCCAACTCACATACGTCGACGAGCTCTTGCTCGCCCTCAAGACTCTCTTT
GTCAAATACTATGAACCCGTCATTGCCACCTTTGTAGCCTCTCTCCATACCCTCAACTCTGCCAAGGCGACTGCC
CTCGAGCCTACCACTTGGAATTTCGCCAAACTGTTTGAAAAATGGGACAGCACTTTTGATAGCGTCTTGCGCAGT
TTGGAGGACAAGGACCGTCGATCCCGCGGGCGAGCCATCATTCGCTCCGCTCCAGTACCCGTCGAAACTCCTTCC
TCTGACGACCAAAGTACCGACCCCACTGTAGACGTCGATGCTCCTAAAGATGAACAACAGATAGCCAGAAATCTC
CAGACTTTGAAGAACAGACTACGTGGGCGAGGCGGAAGGCGTGGGGCGCGGGGAGGGAGGCAAGTGATGATGGAG
GGATTTGGCGGCCGAGAGAGTCAGTCCAATTCCGAGTCCGAGGCTCCGACAAAGCGCAAGAACAAGACCAAGGTC
GGGCGCACGTGGGGAGATTCTCACCCGACTGAACAAGATATGGAGGCTTTGGATTATAGTGCCGACAGGCCGATC
GATGGAAGCGGCCGCGTTACCGAAGATGTCCAGACACTCGTTGATCAGTCCTCTCTTGGTTCTAGGAATCGAGAT
GGCCTGTATGAAGTCAAGGATTGGGAGTTCTCCAAAGACCATAATGATGTACTCGCCAAAGTCATAGAGTCCAAG
CCTGACCCTTCTAGTTCTCTTGGAACCTTTGGATCGCTGATTGCCAGGCTTACTGGGTCCAAGGTTCTCACCGAA
GCTGACCTAAAACCCATACTTGACGGCATGGAACAACACCTGATGAAGAAGAACGTTGCGAAAGAGATTGCTGAA
AAGATATGTGAGAGTGTCGGTGAAAATTTGGTTGGCAGAAAAGTCGGTGGATTCGAAACCACAAACGCCGCCGTT
CGAAAAGCACTTTCAACCTCTATCACTCGCATTCTCACTCCCAAGACCTCGACTGACCTCCTTCTCTCCATTCGT
ACTAAATTGTCATCACCTCTCCCCTCAACCCAACAACGCATGCCATACAGTATCACATTTGTCGGCGTCAACGGT
GTGGGAAAGAGCACGAATCTCTCAAAGGTCTGTTTTTGGTTGATCCAAAACGGACTACGCGTTTTGATCGCTGCT
TGTGATACGTTCCGGAGCGGAGCGGTTGAACAATTACGTGTCCATGTCAGGAATCTCAGCATGCTCGGTGTGAAT
GGCGCGGGAGACAGTAAAGGTCGTGTGGAGTTGTACGAGAAAGGATATGGCAAGGATGCAGCGGCAATAGCTAAA
GAAGCTATCACATATGCTCGAGACAACGATTTTGACGTTGTTTTAATTGATACGGCAGGGCGTATGCAGGATAAT
GAACCATTGATGCGGGCACTTGCAAAGTTGGTTGCGACGAACAATCCGGACAAGATCATCTTTGTTGGTGAAGCC
TTGGTGGGCAACGAAGCAGTCGACCAGCTGACCAAATTTGATCGTGCTCTGCGCGATTTTTCATCTGCTTCCGGT
GTTGGCAAGGGACGCGGTATCGATGGGATGCTGGTAACCAAATGGGATACAGTGGATGACAAGGTGGGAGCCGCA
CTCTCCATGACATATGTCACTGGGCAACCTATCATTTTCGTTGGATGTGGACAGACATATACGGATCTACGGCAG
TTGAAGGTGGCGAATGTGGTTCAGGCTATCTTGAGCGAATAG
Transcript >AgabiH97|058910
ATGGTCCCTGCCTTGCCTCCCCTCGCCACCCTCTCCCAGCTCAGACTCTCCCCGTCCCAGCAGGATGCCATTCCT
CCAGACCTCGAGGAGGATCTCCGCACCTATGGCTGCAAGCTCATCCACCAGGCCGGCATTCTCTTGGCCCAGAAA
CAGGTCGCTGTTGCTACGGCGCAGATCCTCTTTCAGAGATTTTGGTATGTCAGTTCACTGAAAAACTTTGGTGTA
GCGGACATTGGGATGGGTGCATTGTATCTCGCTTCGAAATTGGAAGAGTGTCCCATACGCATGCGGGACCTGATC
AATGTCTACGACGTCTTGCTCCAGCGAGCAGCGCACTCGATTAGCCCCAAAGCGGATACACCATTCAAGTACTAC
CCCATGTCCTACTTTGGCACTTCATTCTACGATCTCAAAGAAGCGCTCGTGGTTGCCGAGATGCAGGTTCTGAAG
CGACTGGGGTTTGACGTGCACGTTGTGCTTCCATATGGCACGCTTGTCAATTATCTCCAAGTGCTTGGACTCATC
AAACACGGAACTGCATGCACGAGGGCATGGGGGTACCTTAATGATGCATTCCAGACGCCGGTGTATGCACTGTAC
CAAGTGCCGACGATTGTGTGCGCGGCGATTCTGCTGACGGTGCGGCACCTGGGGCTGTCGCTGCCGTCGGAGGCG
CCACACTGCTGGTGGGAGCTGTTCGACGCGGCATGGGAGGACATGTGGAGTGTATGTGGGTACATCATGCGGCTG
TACCGGGAACGCGGGGCTGAGGAACGGCGACGAGTGCTTGGTCTCGTTGCGAAAAAGGACGTGCGGCGGTGGCTC
GATACCTTCTCAATGCTCGACCACTGCTCCATCTCCCACAAAGGTGGCCTTGTGCTCTGGTCTCGCTCCTTTACC
CCTGCCGCCGCACAGCTCGCCTCGTCACCCGTCTCCCCAGTCAATTCCCTCATCCGCGATGCCCTCATCGAAGGT
AGAACAACGGATGAAAAATACGAAAAGGATGGCTACGCCGTCAAATGGACCTTTGTCAACGACCTCGAGCTCATC
TTTGTCGTCGCATATCAGCGCATCCTCCAACTCACATACGTCGACGAGCTCTTGCTCGCCCTCAAGACTCTCTTT
GTCAAATACTATGAACCCGTCATTGCCACCTTTGTAGCCTCTCTCCATACCCTCAACTCTGCCAAGGCGACTGCC
CTCGAGCCTACCACTTGGAATTTCGCCAAACTGTTTGAAAAATGGGACAGCACTTTTGATAGCGTCTTGCGCAGT
TTGGAGGACAAGGACCGTCGATCCCGCGGGCGAGCCATCATTCGCTCCGCTCCAGTACCCGTCGAAACTCCTTCC
TCTGACGACCAAAGTACCGACCCCACTGTAGACGTCGATGCTCCTAAAGATGAACAACAGATAGCCAGAAATCTC
CAGACTTTGAAGAACAGACTACGTGGGCGAGGCGGAAGGCGTGGGGCGCGGGGAGGGAGGCAAGTGATGATGGAG
GGATTTGGCGGCCGAGAGAGTCAGTCCAATTCCGAGTCCGAGGCTCCGACAAAGCGCAAGAACAAGACCAAGGTC
GGGCGCACGTGGGGAGATTCTCACCCGACTGAACAAGATATGGAGGCTTTGGATTATAGTGCCGACAGGCCGATC
GATGGAAGCGGCCGCGTTACCGAAGATGTCCAGACACTCGTTGATCAGTCCTCTCTTGGTTCTAGGAATCGAGAT
GGCCTGTATGAAGTCAAGGATTGGGAGTTCTCCAAAGACCATAATGATGTACTCGCCAAAGTCATAGAGTCCAAG
CCTGACCCTTCTAGTTCTCTTGGAACCTTTGGATCGCTGATTGCCAGGCTTACTGGGTCCAAGGTTCTCACCGAA
GCTGACCTAAAACCCATACTTGACGGCATGGAACAACACCTGATGAAGAAGAACGTTGCGAAAGAGATTGCTGAA
AAGATATGTGAGAGTGTCGGTGAAAATTTGGTTGGCAGAAAAGTCGGTGGATTCGAAACCACAAACGCCGCCGTT
CGAAAAGCACTTTCAACCTCTATCACTCGCATTCTCACTCCCAAGACCTCGACTGACCTCCTTCTCTCCATTCGT
ACTAAATTGTCATCACCTCTCCCCTCAACCCAACAACGCATGCCATACAGTATCACATTTGTCGGCGTCAACGGT
GTGGGAAAGAGCACGAATCTCTCAAAGGTCTGTTTTTGGTTGATCCAAAACGGACTACGCGTTTTGATCGCTGCT
TGTGATACGTTCCGGAGCGGAGCGGTTGAACAATTACGTGTCCATGTCAGGAATCTCAGCATGCTCGGTGTGAAT
GGCGCGGGAGACAGTAAAGGTCGTGTGGAGTTGTACGAGAAAGGATATGGCAAGGATGCAGCGGCAATAGCTAAA
GAAGCTATCACATATGCTCGAGACAACGATTTTGACGTTGTTTTAATTGATACGGCAGGGCGTATGCAGGATAAT
GAACCATTGATGCGGGCACTTGCAAAGTTGGTTGCGACGAACAATCCGGACAAGATCATCTTTGTTGGTGAAGCC
TTGGTGGGCAACGAAGCAGTCGACCAGCTGACCAAATTTGATCGTGCTCTGCGCGATTTTTCATCTGCTTCCGGT
GTTGGCAAGGGACGCGGTATCGATGGGATGCTGGTAACCAAATGGGATACAGTGGATGACAAGGTGGGAGCCGCA
CTCTCCATGACATATGTCACTGGGCAACCTATCATTTTCGTTGGATGTGGACAGACATATACGGATCTACGGCAG
TTGAAGGTGGCGAATGTGGTTCAGGCTATCTTGAGCGAATAG
Gene >AgabiH97|058910
ATGGTCCCTGCCTTGCCTCCCCTCGCCACCCTCTCCCAGCTCAGACTCTCCCCGTCCCAGCAGGATGCCATTCCT
CCAGACCTCGAGGAGGATCTCCGCACCTATGGCTGCAAGCTCATCCACCAGGCCGGCATTCTCTTGGCCCAGTCT
GTTCTTTTATTCGTCCCTATCCACACTGTTACTCATTTGGCACCAGGAAACAGGTCGCTGTTGCTACGGCGCAGA
TCCTCTTTCAGAGATTTTGGTATGTCAGTTCACTGAAAAACTTTGGTGTAGCGGTGCGTTTCTTTGTCTCGTTTC
GTATGTTTTGCTCAATTCGGGTGTTATGTAGGACATTGGGATGGGTGCATTGTATCTCGCTTCGAAATTGGAAGA
GTGTCCCATACGCATGCGGGACCTGATCAATGTCTACGACGTCTTGCTCCAGCGAGCAGCGCACTCGATTAGCCC
CAAAGCGGATACACCATTCAAGTACTACCCCATGTCCTACTTTGGCACTTCATTCTACGATCTCAAAGAAGCGCT
CGTGGTTGCCGAGATGCAGGTTCTGAAGCGACTGGGGTTTGACGTGCACGTTGTGCTTCCATATGGCACGCTTGT
CAATTATCTCCAAGTGCTTGGACTCATCAAACACGGAACTGCATGCACGAGGGCATGGGGGTACCTTAATGATGC
GTAGGCGACATGATGACATGCTTAGCGAATGAATGAATGCTGACTCTGGTCCAGATTCCAGACGCCGGTGTATGC
ACTGTACCAAGTGCCGACGATTGTGTGCGCGGCGATTCTGCTGACGGTGCGGCACCTGGGGCTGTCGCTGCCGTC
GGAGGCGCCACACTGCTGGTGGGAGCTGTTCGACGCGGCATGGGAGGACATGTGGAGTGTATGTGGGTACATCAT
GCGGCTGTACCGGGAACGCGGGGCTGAGGAACGGCGACGAGTGCTTGGTCTCGTTGCGAAAAAGGACGTGCGGCG
GTGGCTCGATAGTAGATCACGTGTGCAGTAGCAATAGCAATTTGTTAACTTTGATCATTGACTTGCAGCCTTCTC
AATGCTCGACCACTGCTCCATCTCCCACAAAGGTATGGCTACTGGCTCAAGTCTACACTTGCTGACCCCGCCCAG
GTGGCCTTGTGCTCTGGTCTCGCTCCTTTACCCCTGCCGCCGCACAGCTCGCCTCGTCACCCGTCTCCCCAGTCA
ATTCCCTCATCCGCGATGCCCTCATCGAAGGTAGAACAACGGATGAAAAATACGAAAAGGATGGCTACGCCGTCA
AATGGACCTTTGTCAACGACCTCGAGCTCATCTTTGTCGTACGCTGCTAACTCCACCTGCACTCCGAAGCACCCT
CTCAATCCCCCCCTTTCAGGTCGCATATCAGCGCATCCTCCAACTCACATACGTCGACGAGCTCTTGCTCGCCCT
CAAGACTCTCTTTGTCAAATACTATGAACCCGTCATTGCCACCTTTGTAGCCTCTCTCCATACCCTCAACTCTGC
CAAGGCGACTGCCCTCGAGCCTACCACTTGGAATTTCGCCAAACTGTTTGAAAAATGGGACAGCACTTTTGATAG
CGTCTTGCGCAGTTTGGAGGACAAGGTCTGTTCTGGTTAGTTGACCCCGTACAACTGACCTAAATATCACCAGGA
CCGTCGATCCCGCGGGCGAGCCATCATTCGCTCCGCTCCAGTACCCGTCGAAACTCCTTCCTCTGACGACCAAAG
TACCGGTAGGCATTCCGCGACCCAGCTCGTTTGTGTGCCGTATTTATATATCACACATATCAGACCCCACTGTAG
ACGTCGATGCTCCTAAAGATGAACAACAGATAGCCAGAAATCTCCAGACTTTGAAGAACAGACTACGTGGGCGAG
GCGGAAGGCGTGGGGCGCGGGGAGGGAGGCAAGTGATGATGGAGGGATTTGGCGGCCGAGAGAGTCAGTCCAATT
CCGAGTATGTTGCCCCCATTGTGTCTTTATTACTTTCTGATCCGTTGGTGGATTGACAGGTCCGAGGCTCCGACA
AAGCGCAAGAACAAGACCAAGGTCGGGCGCACGTGGGGAGATTCTCACCCGACTGAACAAGATATGGAGGCTTTG
GATTATAGTGCCGACAGGCCGATCGATGGAAGCGGCCGCGTTACCGAAGATGTCCAGACACTCGTTGATCAGTCC
TCTCTTGGTTCTAGGAATCGAGATGGCCTGTATGAAGTCAAGGATTGGGAGTTCTCCAAAGACCATAATGATGTA
CTCGCCAAAGTCATAGAGTCCAAGCCTGACCCTTCTAGTTCTCTTGGAACCTTTGGATCGCTGATTGCCAGGCTT
ACTGGGTCCAAGGTTCTCACCGAAGCTGACCTAAAACCCATACTTGACGGCATGGAACAACACCTGATGAAGAAG
AACGTTGCGAAAGAGATTGCTGAAAAGATATGTGAGAGTGTCGGTGAAAATTTGGTTGGCAGAAAAGTCGGTGGA
TTCGAAAGTGAGTTTTTTATCTCTCCTTCGGAAAGTAAATCATACTCACCAACTCATATTAGCCACAAACGCCGC
CGTTCGAAAAGCACTTTCAACCTCTATCACTCGCATTCTCACTCCCAAGACCTCGACTGACCTCCTTCTCTCCAT
TCGTACTAAATTGTCATCACCTCTCCCCTCAACCCAACAACGCATGCCATACAGTATCACATTTGTCGGCGTCAA
CGGTGTGGGAAAGAGCACGAATCTCTCAAAGGTCTGTTTTTGGTTGATCCAAAACGGACTACGCGTTTTGATCGC
TGCTTGTGATACGTTCCGGTACGTCTATCTTAAAAATTATCTGCGACATGCTGACATTCATACTTTTTTTTCTTC
TCAGGAGCGGAGCGGTTGAACAATTACGTGTCCATGTCAGGAATCTCAGCATGCTCGGTGTGAATGGCGCGGGAG
ACAGTAAAGGTCGTGTGGAGTTGTACGAGAAAGGATATGGCAAGGATGCAGCGGCAATAGCTAAAGAAGCTATCA
CATATGGTATGTGGCACCTCGGCGATACTGACCGAGTCTAAACCCTAACGACATAATGGTAGCTCGAGACAACGA
TTTTGACGTTGTTTTAATTGATACGGCAGGGCGTATGCAGGATAATGAAGTATGATTTCCATCTCTTCTCTCATG
GAATTTATATTGACACCAACGTTTTACTCTCCCTTGCATTGCCGACTTCTTCATTAACCCTTTAAGCCATTGATG
CGGGCACTTGCAAAGTTGGTTGCGACGAACAATCCGGACAAGATCATCTTTGTTGGTGAAGCCTTGGTGGGCAAC
GAAGCAGTCGACCAGCTGACCAAATTTGATCGTGCTCTGCGCGATTTTTCATCTGCTTCCGGTGTTGGCAAGGGA
CGCGGTATCGATGGGATGCTGGTAACCAAATGGGATACAGTGGATGACAAGGTTCGTCTTGGCTCCATTTTTGTT
GTTTTCTATGTTCGGTGGCGTTCTTGTCCTTCTCTGCATCCTGTCTAAATCACGATTCTCTGAAAAGAGCGGTTT
TACCGGATGGATGCATTCTTTTTTATATATATCGCTTTTCTCCATCCGTTATCTGAACGTGAAGAAACTGATCCT
TCTGATATCTTCTTTATAGGTGGGAGCCGCACTCTCCATGACATATGTCACTGGGCAACCTATCATTTTCGTTGG
ATGTGGACAGGTGCGTTACTCTTCCCTATTTTTGATGCCCACCACAAAAGGCAGGGTATATTTGGGGACACTCGC
TGATGATGTATCAACAACTTTTTTTTTTTTTCTTCTTTCAATCAATCCCACTGTAACGGATCTATCAAAACGTCA
ACGTTGCATTGTAAATCACTTCGGGTGCTGTCTGTTGCGTTTCTAGACATATACGGATCTACGGCAGTTGAAGGT
GGCGAATGTGGTTCAGGCTATCTTGAGCGAATAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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