Fungal Genomics

at Utrecht University

General Properties

Protein ID	AgabiH97\|058540
Gene name
Location	scaffold_3:1424887..1426023
Strand	-
Gene length (bp)	1136
Transcript length (bp)	963
Coding sequence length (bp)	963
Protein length (aa)	321

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF05368	NmrA	NmrA-like family	3.3E-42	6	233
PF13460	NAD_binding_10	NAD(P)H-binding	6.9E-13	10	150

Swissprot hits

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Swissprot ID	Swissprot Description	Start	End	E-value
sp\|Q5ZID0\|NMRL1_CHICK	NmrA-like family domain-containing protein 1 OS=Gallus gallus GN=NMRAL1 PE=2 SV=1	4	298	2.0E-41
sp\|Q0VCN1\|NMRL1_BOVIN	NmrA-like family domain-containing protein 1 OS=Bos taurus GN=NMRAL1 PE=2 SV=1	4	298	9.0E-33
sp\|Q9HBL8\|NMRL1_HUMAN	NmrA-like family domain-containing protein 1 OS=Homo sapiens GN=NMRAL1 PE=1 SV=1	4	298	1.0E-32
sp\|Q8K2T1\|NMRL1_MOUSE	NmrA-like family domain-containing protein 1 OS=Mus musculus GN=Nmral1 PE=1 SV=1	4	298	1.0E-31
sp\|Q54LJ8\|NMRL1_DICDI	NmrA-like family domain-containing protein DDB_G0286605 OS=Dictyostelium discoideum GN=DDB_G0286605 PE=2 SV=1	2	237	1.0E-19

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Swissprot ID	Swissprot Description	Start	End	E-value
sp\|Q5ZID0\|NMRL1_CHICK	NmrA-like family domain-containing protein 1 OS=Gallus gallus GN=NMRAL1 PE=2 SV=1	4	298	2.0E-41
sp\|Q0VCN1\|NMRL1_BOVIN	NmrA-like family domain-containing protein 1 OS=Bos taurus GN=NMRAL1 PE=2 SV=1	4	298	9.0E-33
sp\|Q9HBL8\|NMRL1_HUMAN	NmrA-like family domain-containing protein 1 OS=Homo sapiens GN=NMRAL1 PE=1 SV=1	4	298	1.0E-32
sp\|Q8K2T1\|NMRL1_MOUSE	NmrA-like family domain-containing protein 1 OS=Mus musculus GN=Nmral1 PE=1 SV=1	4	298	1.0E-31
sp\|Q54LJ8\|NMRL1_DICDI	NmrA-like family domain-containing protein DDB_G0286605 OS=Dictyostelium discoideum GN=DDB_G0286605 PE=2 SV=1	2	237	1.0E-19
sp\|Q5AU62\|NMRA_EMENI	Nitrogen metabolite repression protein nmrA OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=nmrA PE=1 SV=1	94	234	7.0E-08
sp\|P86172\|NMRL1_RAT	NmrA-like family domain-containing protein 1 (Fragments) OS=Rattus norvegicus GN=Nmral1 PE=1 SV=1	4	97	7.0E-06

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GO

(None)

SignalP

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SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 11	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Developmental stages of Agaricus bisporus (strain A15). Published in Pelkmans et al, Applied Microbiology and Biotechnology, 2016

Click here for more information

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>AgabiH97\|058540 MMSKLIVVIGATGQQGGSVIDFLLKEAGGVFKVRGVTRNPSSPASLALAARGVEVVKADLSSLEDTTKAFSGAWG IYAVTQFYEHGYEAEQLHGKNIVEAAKVVGANHIVLSTVEGREGQCQAISWTSKALIEDRVIESGIPFTFVHIPM YYENFWTDFFAPQYNEELGFHWSVNFLPDVPIFAYSVADHGAWVVPAFREPEKYTGKRIKIVADYISLRDIVVQF SQMTGEKASLAFELTKEQFEASRNANHPAAELMYLSWEYVIRAGPNSGVRDKEQTFSIYPQAKTYQQWLKDSKVV RGLVAKLKAEAAAKAASSTA*
Coding	>AgabiH97\|058540 ATGATGTCTAAACTGATCGTTGTCATAGGCGCTACTGGTCAGCAAGGCGGCTCCGTTATTGACTTCCTCCTCAAA GAGGCTGGTGGGGTCTTTAAAGTGCGCGGAGTCACAAGAAATCCCAGCTCTCCAGCGTCCCTCGCTCTTGCAGCT AGAGGTGTTGAAGTTGTCAAGGCCGATTTGAGCTCGCTCGAAGACACAACAAAGGCCTTTTCTGGAGCATGGGGA ATCTACGCCGTGACCCAATTTTATGAGCATGGCTACGAAGCTGAACAACTCCACGGCAAAAATATCGTCGAAGCT GCAAAGGTCGTCGGTGCAAATCATATCGTTTTGTCTACCGTTGAGGGTCGAGAAGGTCAATGCCAGGCTATCAGT TGGACATCCAAGGCCTTAATTGAGGATCGTGTAATCGAGTCGGGGATCCCCTTCACTTTCGTGCACATCCCTATG TATTATGAAAACTTTTGGACGGATTTCTTCGCACCACAGTACAACGAAGAATTGGGCTTCCACTGGTCCGTTAAC TTCCTCCCAGATGTTCCCATCTTCGCCTACAGTGTTGCCGATCATGGTGCTTGGGTTGTTCCGGCATTCCGGGAG CCAGAGAAGTACACTGGAAAGCGCATCAAGATCGTTGCAGACTATATCAGCCTTCGCGATATTGTGGTTCAGTTC AGCCAGATGACAGGAGAAAAAGCCTCGTTGGCTTTTGAGTTAACCAAGGAACAGTTCGAGGCCTCACGGAACGCT AACCATCCTGCCGCCGAGCTAATGTATCTATCTTGGGAATATGTTATCCGTGCCGGTCCAAATAGTGGTGTTCGT GACAAAGAACAGACATTTTCCATATATCCTCAGGCGAAGACTTATCAGCAGTGGTTAAAGGATAGTAAGGTGGTC AGAGGTCTTGTCGCGAAACTAAAGGCAGAGGCAGCTGCAAAGGCAGCTAGCAGTACGGCATAA
Transcript	>AgabiH97\|058540 ATGATGTCTAAACTGATCGTTGTCATAGGCGCTACTGGTCAGCAAGGCGGCTCCGTTATTGACTTCCTCCTCAAA GAGGCTGGTGGGGTCTTTAAAGTGCGCGGAGTCACAAGAAATCCCAGCTCTCCAGCGTCCCTCGCTCTTGCAGCT AGAGGTGTTGAAGTTGTCAAGGCCGATTTGAGCTCGCTCGAAGACACAACAAAGGCCTTTTCTGGAGCATGGGGA ATCTACGCCGTGACCCAATTTTATGAGCATGGCTACGAAGCTGAACAACTCCACGGCAAAAATATCGTCGAAGCT GCAAAGGTCGTCGGTGCAAATCATATCGTTTTGTCTACCGTTGAGGGTCGAGAAGGTCAATGCCAGGCTATCAGT TGGACATCCAAGGCCTTAATTGAGGATCGTGTAATCGAGTCGGGGATCCCCTTCACTTTCGTGCACATCCCTATG TATTATGAAAACTTTTGGACGGATTTCTTCGCACCACAGTACAACGAAGAATTGGGCTTCCACTGGTCCGTTAAC TTCCTCCCAGATGTTCCCATCTTCGCCTACAGTGTTGCCGATCATGGTGCTTGGGTTGTTCCGGCATTCCGGGAG CCAGAGAAGTACACTGGAAAGCGCATCAAGATCGTTGCAGACTATATCAGCCTTCGCGATATTGTGGTTCAGTTC AGCCAGATGACAGGAGAAAAAGCCTCGTTGGCTTTTGAGTTAACCAAGGAACAGTTCGAGGCCTCACGGAACGCT AACCATCCTGCCGCCGAGCTAATGTATCTATCTTGGGAATATGTTATCCGTGCCGGTCCAAATAGTGGTGTTCGT GACAAAGAACAGACATTTTCCATATATCCTCAGGCGAAGACTTATCAGCAGTGGTTAAAGGATAGTAAGGTGGTC AGAGGTCTTGTCGCGAAACTAAAGGCAGAGGCAGCTGCAAAGGCAGCTAGCAGTACGGCATAA
Gene	>AgabiH97\|058540 ATGATGTCTAAACTGATCGTTGTCATAGGCGCTACTGGTCAGTAAGTTGCCGAGCCGTATTGTGTTGTAGGTCTT TAGCTAATGTTATTTGTATAGGCAAGGCGGCTCCGTTATTGACTTCCTCCTCAAAGAGGCTGGTGGGGTCTTTAA AGTGCGCGGAGTCACAAGAAATCCCAGCTCTCCAGCGTCCCTCGCTCTTGCAGCTAGAGGTGTTGAAGTTGTCAA GGCCGATTTGAGCTCGCTCGAAGACACAACAAAGGCCTTTTCTGGAGCATGGGGAATCTACGCCGTGACCCAATT TTATGAGCATGGCTACGAAGCTGAACAACTCCACGGCAAAAATATCGTCGAAGCTGCAAAGGTCGTCGGTGCAAA TCATATCGTTTTGTCTACCGTTGAGGGTCGAGAAGGTCAATGCCAGGCTATCAGTTGGACATCCAAGGCCTTAAT TGAGGATCGTGTAATCGAGTCGGGGATCCCCTTCACTTTCGTGCACATCCCTATGTATTATGAAAACTTTTGGAC GGATTTCTTCGCACCACAGTACAACGAAGAATTGGGCTTCCACTGGTCCGTTAACTTCCTCCCAGATGTTCCCAT CTTCGCCTACAGTGTTGCCGATCATGGTGCTTGGGTTGTTCCGGCATTCCGGGAGCCAGAGAAGTACACTGGTGA GGACTTCCTAGCGGCAGCGTCCCGTCAATTGAATCAGATTGAATCATATACTAGGAAAGCGCATCAAGATCGTTG CAGACTATATCAGCCTTCGCGATATTGTGGTTCAGTTCAGCCAGATGACAGGAGAAAAAGCCTCGTTGGCTTTTG AGTTAACCAAGGAACAGTTCGAGGCCTCACGGAACGCTAACCATCCTGCCGCCGAGCTAATGTATCTATCTTGGG AATATGTTATCCGTGCCGGTCCAAATAGTGGTGTTCGTGTGAGTCTCCTCCGATCTTTTGTCAGGCTTTGGCGCT TCGGATATGACCCATTAGGACAGGACAAAGAACAGACATTTTCCATATATCCTCAGGCGAAGACTTATCAGCAGT GGTTAAAGGATAGTAAGGTGGTCAGAGGTCTTGTCGCGAAACTAAAGGCAGAGGCAGCTGCAAAGGCAGCTAGCA GTACGGCATAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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