Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabiH97|058540
Gene name
Locationscaffold_3:1424887..1426023
Strand-
Gene length (bp)1136
Transcript length (bp)963
Coding sequence length (bp)963
Protein length (aa) 321

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF05368 NmrA NmrA-like family 3.3E-42 6 233
PF13460 NAD_binding_10 NAD(P)H-binding 6.9E-13 10 150

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|Q5ZID0|NMRL1_CHICK NmrA-like family domain-containing protein 1 OS=Gallus gallus GN=NMRAL1 PE=2 SV=1 4 298 2.0E-41
sp|Q0VCN1|NMRL1_BOVIN NmrA-like family domain-containing protein 1 OS=Bos taurus GN=NMRAL1 PE=2 SV=1 4 298 9.0E-33
sp|Q9HBL8|NMRL1_HUMAN NmrA-like family domain-containing protein 1 OS=Homo sapiens GN=NMRAL1 PE=1 SV=1 4 298 1.0E-32
sp|Q8K2T1|NMRL1_MOUSE NmrA-like family domain-containing protein 1 OS=Mus musculus GN=Nmral1 PE=1 SV=1 4 298 1.0E-31
sp|Q54LJ8|NMRL1_DICDI NmrA-like family domain-containing protein DDB_G0286605 OS=Dictyostelium discoideum GN=DDB_G0286605 PE=2 SV=1 2 237 1.0E-19
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Swissprot ID Swissprot Description Start End E-value
sp|Q5ZID0|NMRL1_CHICK NmrA-like family domain-containing protein 1 OS=Gallus gallus GN=NMRAL1 PE=2 SV=1 4 298 2.0E-41
sp|Q0VCN1|NMRL1_BOVIN NmrA-like family domain-containing protein 1 OS=Bos taurus GN=NMRAL1 PE=2 SV=1 4 298 9.0E-33
sp|Q9HBL8|NMRL1_HUMAN NmrA-like family domain-containing protein 1 OS=Homo sapiens GN=NMRAL1 PE=1 SV=1 4 298 1.0E-32
sp|Q8K2T1|NMRL1_MOUSE NmrA-like family domain-containing protein 1 OS=Mus musculus GN=Nmral1 PE=1 SV=1 4 298 1.0E-31
sp|Q54LJ8|NMRL1_DICDI NmrA-like family domain-containing protein DDB_G0286605 OS=Dictyostelium discoideum GN=DDB_G0286605 PE=2 SV=1 2 237 1.0E-19
sp|Q5AU62|NMRA_EMENI Nitrogen metabolite repression protein nmrA OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=nmrA PE=1 SV=1 94 234 7.0E-08
sp|P86172|NMRL1_RAT NmrA-like family domain-containing protein 1 (Fragments) OS=Rattus norvegicus GN=Nmral1 PE=1 SV=1 4 97 7.0E-06
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GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Cytoplasm Peroxisomal targeting signal 0.5965 0.2445 0.2624 0.0688 0.4999 0.0214 0.1009 0.1646 0.2352 0.1567

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

Analysis 1: Developmental stages of Agaricus bisporus (strain A15). Published in Pelkmans et al, Applied Microbiology and Biotechnology, 2016

Click here for more information

Orthologs

Orthofinder run ID1
Orthogroup469
Change Orthofinder run
Species Protein ID
Agaricus bisporus var bisporus H39 AgabiH39|058540
Agaricus bisporus var bisporus H97 AgabiH97|058540 (this protein)

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >AgabiH97|058540
MMSKLIVVIGATGQQGGSVIDFLLKEAGGVFKVRGVTRNPSSPASLALAARGVEVVKADLSSLEDTTKAFSGAWG
IYAVTQFYEHGYEAEQLHGKNIVEAAKVVGANHIVLSTVEGREGQCQAISWTSKALIEDRVIESGIPFTFVHIPM
YYENFWTDFFAPQYNEELGFHWSVNFLPDVPIFAYSVADHGAWVVPAFREPEKYTGKRIKIVADYISLRDIVVQF
SQMTGEKASLAFELTKEQFEASRNANHPAAELMYLSWEYVIRAGPNSGVRDKEQTFSIYPQAKTYQQWLKDSKVV
RGLVAKLKAEAAAKAASSTA*
Coding >AgabiH97|058540
ATGATGTCTAAACTGATCGTTGTCATAGGCGCTACTGGTCAGCAAGGCGGCTCCGTTATTGACTTCCTCCTCAAA
GAGGCTGGTGGGGTCTTTAAAGTGCGCGGAGTCACAAGAAATCCCAGCTCTCCAGCGTCCCTCGCTCTTGCAGCT
AGAGGTGTTGAAGTTGTCAAGGCCGATTTGAGCTCGCTCGAAGACACAACAAAGGCCTTTTCTGGAGCATGGGGA
ATCTACGCCGTGACCCAATTTTATGAGCATGGCTACGAAGCTGAACAACTCCACGGCAAAAATATCGTCGAAGCT
GCAAAGGTCGTCGGTGCAAATCATATCGTTTTGTCTACCGTTGAGGGTCGAGAAGGTCAATGCCAGGCTATCAGT
TGGACATCCAAGGCCTTAATTGAGGATCGTGTAATCGAGTCGGGGATCCCCTTCACTTTCGTGCACATCCCTATG
TATTATGAAAACTTTTGGACGGATTTCTTCGCACCACAGTACAACGAAGAATTGGGCTTCCACTGGTCCGTTAAC
TTCCTCCCAGATGTTCCCATCTTCGCCTACAGTGTTGCCGATCATGGTGCTTGGGTTGTTCCGGCATTCCGGGAG
CCAGAGAAGTACACTGGAAAGCGCATCAAGATCGTTGCAGACTATATCAGCCTTCGCGATATTGTGGTTCAGTTC
AGCCAGATGACAGGAGAAAAAGCCTCGTTGGCTTTTGAGTTAACCAAGGAACAGTTCGAGGCCTCACGGAACGCT
AACCATCCTGCCGCCGAGCTAATGTATCTATCTTGGGAATATGTTATCCGTGCCGGTCCAAATAGTGGTGTTCGT
GACAAAGAACAGACATTTTCCATATATCCTCAGGCGAAGACTTATCAGCAGTGGTTAAAGGATAGTAAGGTGGTC
AGAGGTCTTGTCGCGAAACTAAAGGCAGAGGCAGCTGCAAAGGCAGCTAGCAGTACGGCATAA
Transcript >AgabiH97|058540
ATGATGTCTAAACTGATCGTTGTCATAGGCGCTACTGGTCAGCAAGGCGGCTCCGTTATTGACTTCCTCCTCAAA
GAGGCTGGTGGGGTCTTTAAAGTGCGCGGAGTCACAAGAAATCCCAGCTCTCCAGCGTCCCTCGCTCTTGCAGCT
AGAGGTGTTGAAGTTGTCAAGGCCGATTTGAGCTCGCTCGAAGACACAACAAAGGCCTTTTCTGGAGCATGGGGA
ATCTACGCCGTGACCCAATTTTATGAGCATGGCTACGAAGCTGAACAACTCCACGGCAAAAATATCGTCGAAGCT
GCAAAGGTCGTCGGTGCAAATCATATCGTTTTGTCTACCGTTGAGGGTCGAGAAGGTCAATGCCAGGCTATCAGT
TGGACATCCAAGGCCTTAATTGAGGATCGTGTAATCGAGTCGGGGATCCCCTTCACTTTCGTGCACATCCCTATG
TATTATGAAAACTTTTGGACGGATTTCTTCGCACCACAGTACAACGAAGAATTGGGCTTCCACTGGTCCGTTAAC
TTCCTCCCAGATGTTCCCATCTTCGCCTACAGTGTTGCCGATCATGGTGCTTGGGTTGTTCCGGCATTCCGGGAG
CCAGAGAAGTACACTGGAAAGCGCATCAAGATCGTTGCAGACTATATCAGCCTTCGCGATATTGTGGTTCAGTTC
AGCCAGATGACAGGAGAAAAAGCCTCGTTGGCTTTTGAGTTAACCAAGGAACAGTTCGAGGCCTCACGGAACGCT
AACCATCCTGCCGCCGAGCTAATGTATCTATCTTGGGAATATGTTATCCGTGCCGGTCCAAATAGTGGTGTTCGT
GACAAAGAACAGACATTTTCCATATATCCTCAGGCGAAGACTTATCAGCAGTGGTTAAAGGATAGTAAGGTGGTC
AGAGGTCTTGTCGCGAAACTAAAGGCAGAGGCAGCTGCAAAGGCAGCTAGCAGTACGGCATAA
Gene >AgabiH97|058540
ATGATGTCTAAACTGATCGTTGTCATAGGCGCTACTGGTCAGTAAGTTGCCGAGCCGTATTGTGTTGTAGGTCTT
TAGCTAATGTTATTTGTATAGGCAAGGCGGCTCCGTTATTGACTTCCTCCTCAAAGAGGCTGGTGGGGTCTTTAA
AGTGCGCGGAGTCACAAGAAATCCCAGCTCTCCAGCGTCCCTCGCTCTTGCAGCTAGAGGTGTTGAAGTTGTCAA
GGCCGATTTGAGCTCGCTCGAAGACACAACAAAGGCCTTTTCTGGAGCATGGGGAATCTACGCCGTGACCCAATT
TTATGAGCATGGCTACGAAGCTGAACAACTCCACGGCAAAAATATCGTCGAAGCTGCAAAGGTCGTCGGTGCAAA
TCATATCGTTTTGTCTACCGTTGAGGGTCGAGAAGGTCAATGCCAGGCTATCAGTTGGACATCCAAGGCCTTAAT
TGAGGATCGTGTAATCGAGTCGGGGATCCCCTTCACTTTCGTGCACATCCCTATGTATTATGAAAACTTTTGGAC
GGATTTCTTCGCACCACAGTACAACGAAGAATTGGGCTTCCACTGGTCCGTTAACTTCCTCCCAGATGTTCCCAT
CTTCGCCTACAGTGTTGCCGATCATGGTGCTTGGGTTGTTCCGGCATTCCGGGAGCCAGAGAAGTACACTGGTGA
GGACTTCCTAGCGGCAGCGTCCCGTCAATTGAATCAGATTGAATCATATACTAGGAAAGCGCATCAAGATCGTTG
CAGACTATATCAGCCTTCGCGATATTGTGGTTCAGTTCAGCCAGATGACAGGAGAAAAAGCCTCGTTGGCTTTTG
AGTTAACCAAGGAACAGTTCGAGGCCTCACGGAACGCTAACCATCCTGCCGCCGAGCTAATGTATCTATCTTGGG
AATATGTTATCCGTGCCGGTCCAAATAGTGGTGTTCGTGTGAGTCTCCTCCGATCTTTTGTCAGGCTTTGGCGCT
TCGGATATGACCCATTAGGACAGGACAAAGAACAGACATTTTCCATATATCCTCAGGCGAAGACTTATCAGCAGT
GGTTAAAGGATAGTAAGGTGGTCAGAGGTCTTGTCGCGAAACTAAAGGCAGAGGCAGCTGCAAAGGCAGCTAGCA
GTACGGCATAA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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