© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | AgabiH97|057940 |
| Gene name | |
| Location | scaffold_3:1279917..1281731 |
| Strand | - |
| Gene length (bp) | 1814 |
| Transcript length (bp) | 1350 |
| Coding sequence length (bp) | 1350 |
| Protein length (aa) | 450 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF08635 | ox_reductase_C | Putative oxidoreductase C terminal domain | 2.2E-70 | 206 | 347 |
| PF01408 | GFO_IDH_MocA | Oxidoreductase family, NAD-binding Rossmann fold | 3.2E-23 | 50 | 203 |
| PF02894 | GFO_IDH_MocA_C | Oxidoreductase family, C-terminal alpha/beta domain | 2.0E-05 | 232 | 336 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|O14082|YEAH_SCHPO | Uncharacterized protein UNK4.17 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC2E11.17 PE=4 SV=2 | 47 | 424 | 6.0E-121 |
| sp|Q09745|YB64_SCHPO | Uncharacterized protein C12C2.04 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC12C2.04 PE=4 SV=1 | 42 | 418 | 3.0E-112 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0000166 | nucleotide binding | Yes |
| GO:0003674 | molecular_function | No |
| GO:0005488 | binding | No |
| GO:0097159 | organic cyclic compound binding | No |
| GO:1901363 | heterocyclic compound binding | No |
| GO:0036094 | small molecule binding | No |
| GO:1901265 | nucleoside phosphate binding | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 14 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >AgabiH97|057940 MQSRRTSATAAVRRMSGRRGSGISSRRSSIDPTRLVPMDKVTHIGGGDDFNVVFIGAGNIMFGSDEGPWNHSFRL EHKLGRRLKVVALIDPAIDRATAVLQKKCDSFVVSAYQDTRVYKTLDDFVKNMTPKERPRAIIIGSPPMFRGSLQ PGRDVEMQILKHFPGVAMFVEKPIATGSYEHAQDGYVIAKMITDTKTICSVGYMLRYLKAVQLMKQVIEENNLTV MSTIARYAAAYEAIAKADWWDKSKSGGPIIEQGTHFCDLSRYFGGEVDLESVHAHSLEWDENAGQLSQMRIDESK IAPENRVPRATVATWKYDSGAVGSFTHVASLQGTDYSCEFEVYADGYLLKLVNPYVQPVLYVRTPDDDRERAYSF PDDDPFFSEVSHLIDVIEDIEEDPEAAQILSSYEDAVRTYEFTWAIRSASERSRAAKLKASRDGAKAQKENQTD* |
| Coding | >AgabiH97|057940 ATGCAGAGCCGCAGAACTTCCGCTACTGCCGCTGTTCGTCGCATGTCCGGGCGACGTGGCTCGGGGATCTCATCG CGTCGCTCCTCGATCGACCCTACGCGGCTAGTTCCCATGGATAAAGTTACCCATATCGGGGGCGGCGACGACTTT AATGTCGTTTTCATAGGCGCAGGCAATATTATGTTTGGTTCTGACGAAGGTCCATGGAATCACTCCTTTCGTTTG GAGCACAAACTCGGCCGCCGCCTCAAAGTCGTAGCACTCATTGACCCTGCTATCGACCGTGCTACCGCGGTTCTC CAGAAAAAGTGCGATTCATTTGTCGTATCGGCCTATCAGGATACGCGCGTCTACAAGACCCTTGATGACTTTGTG AAAAATATGACCCCAAAAGAGAGGCCGCGTGCCATCATCATTGGATCTCCCCCTATGTTCCGGGGGTCTTTGCAA CCAGGTAGAGACGTTGAAATGCAGATCCTGAAACATTTCCCTGGTGTTGCCATGTTCGTCGAGAAACCGATTGCC ACGGGGTCGTACGAACATGCCCAGGATGGATATGTGATCGCAAAGATGATCACGGACACCAAGACCATTTGTTCT GTCGGGTACATGCTGCGTTACCTCAAGGCTGTTCAACTCATGAAACAAGTCATTGAGGAGAACAACTTGACTGTA ATGTCCACTATTGCCCGTTATGCCGCTGCATATGAGGCTATTGCTAAGGCAGATTGGTGGGACAAATCGAAAAGC GGGGGCCCTATAATTGAACAAGGCACCCACTTTTGCGATCTTTCGCGTTATTTCGGTGGTGAAGTCGACCTTGAG AGCGTCCATGCTCATTCACTCGAGTGGGATGAAAATGCTGGCCAGTTGTCGCAAATGCGTATTGATGAGAGCAAG ATAGCCCCGGAAAATAGGGTACCGCGTGCCACTGTAGCAACCTGGAAATACGACAGTGGAGCTGTTGGAAGTTTT ACACACGTTGCCTCTCTTCAAGGGACAGACTACAGTTGTGAATTCGAAGTCTACGCTGACGGATATCTTCTGAAA CTTGTCAACCCTTACGTCCAACCAGTCCTCTACGTTCGAACTCCCGATGATGATCGTGAACGTGCATATTCTTTC CCAGATGACGATCCGTTCTTCTCCGAAGTTTCTCATCTCATTGATGTAATCGAGGATATTGAAGAGGACCCTGAA GCTGCTCAAATCCTTAGCTCGTATGAAGATGCGGTAAGGACGTATGAATTCACTTGGGCTATCCGTTCAGCTAGT GAGCGGTCCCGGGCAGCCAAACTCAAGGCTAGCCGCGACGGAGCTAAGGCGCAAAAAGAAAATCAAACAGACTGA |
| Transcript | >AgabiH97|057940 ATGCAGAGCCGCAGAACTTCCGCTACTGCCGCTGTTCGTCGCATGTCCGGGCGACGTGGCTCGGGGATCTCATCG CGTCGCTCCTCGATCGACCCTACGCGGCTAGTTCCCATGGATAAAGTTACCCATATCGGGGGCGGCGACGACTTT AATGTCGTTTTCATAGGCGCAGGCAATATTATGTTTGGTTCTGACGAAGGTCCATGGAATCACTCCTTTCGTTTG GAGCACAAACTCGGCCGCCGCCTCAAAGTCGTAGCACTCATTGACCCTGCTATCGACCGTGCTACCGCGGTTCTC CAGAAAAAGTGCGATTCATTTGTCGTATCGGCCTATCAGGATACGCGCGTCTACAAGACCCTTGATGACTTTGTG AAAAATATGACCCCAAAAGAGAGGCCGCGTGCCATCATCATTGGATCTCCCCCTATGTTCCGGGGGTCTTTGCAA CCAGGTAGAGACGTTGAAATGCAGATCCTGAAACATTTCCCTGGTGTTGCCATGTTCGTCGAGAAACCGATTGCC ACGGGGTCGTACGAACATGCCCAGGATGGATATGTGATCGCAAAGATGATCACGGACACCAAGACCATTTGTTCT GTCGGGTACATGCTGCGTTACCTCAAGGCTGTTCAACTCATGAAACAAGTCATTGAGGAGAACAACTTGACTGTA ATGTCCACTATTGCCCGTTATGCCGCTGCATATGAGGCTATTGCTAAGGCAGATTGGTGGGACAAATCGAAAAGC GGGGGCCCTATAATTGAACAAGGCACCCACTTTTGCGATCTTTCGCGTTATTTCGGTGGTGAAGTCGACCTTGAG AGCGTCCATGCTCATTCACTCGAGTGGGATGAAAATGCTGGCCAGTTGTCGCAAATGCGTATTGATGAGAGCAAG ATAGCCCCGGAAAATAGGGTACCGCGTGCCACTGTAGCAACCTGGAAATACGACAGTGGAGCTGTTGGAAGTTTT ACACACGTTGCCTCTCTTCAAGGGACAGACTACAGTTGTGAATTCGAAGTCTACGCTGACGGATATCTTCTGAAA CTTGTCAACCCTTACGTCCAACCAGTCCTCTACGTTCGAACTCCCGATGATGATCGTGAACGTGCATATTCTTTC CCAGATGACGATCCGTTCTTCTCCGAAGTTTCTCATCTCATTGATGTAATCGAGGATATTGAAGAGGACCCTGAA GCTGCTCAAATCCTTAGCTCGTATGAAGATGCGGTAAGGACGTATGAATTCACTTGGGCTATCCGTTCAGCTAGT GAGCGGTCCCGGGCAGCCAAACTCAAGGCTAGCCGCGACGGAGCTAAGGCGCAAAAAGAAAATCAAACAGACTGA |
| Gene | >AgabiH97|057940 ATGCAGGTATGTGTCCCTCCCAATCCCCCTCCTCGTGCTGTCTCCACGCCCAATTCAGAGCCGCAGAACTTCCGC TACTGCCGCTGTTCGTCGCATGTCCGGGCGACGTGGCTCGGGGATCTCATCGCGTCGCTCCTCGATCGACCCTAC GCGGCTAGTTCCCATGGATAAGTCAGTCCAAGCCATTGTTTCGCAATGCATTGTCTTAACCTCCTACTTGCCATA GAGTTACCCATATCGGGGGCGGCGACGACTTTAATGTCGTTTTCATAGGCGCAGGCAATATTATGTTTGGTCCTG CATATCGCCGCTTTATGTGCTTTCTGTTTGTTCTCATGTCATACAACAGGTTCTGACGAAGGTCCATGGAATCAC TCCTTTCGTTTGGAGCAGTAAGTGAATTCTAGGCTCTGCATATATGCACTTTCTCAAAGTGTACCCAGCAAACTC GGCCGCCGCCTCAAAGTCGTAGCACTCATTGACCCTGCTATCGACCGTGCTACCGCGGTTCTCCAGAAAAAGTGC GATTCATTTGTCGTATCGGCCTATCAGGATACGCGCGTCTACAAGACCCTTGATGACTTTGTGAAAAATATGACC CCAAAAGAGAGGCCGCGTGCCATCATCATTGGATCTCCCCCTATGTTCCGGGGGTCTTTGCAACCAGGTAGAGAC GTTGAAATGCAGATCCTGAAACATTTCCCTGGTGTTGCCATGTTCGTCGAGAAACCGATTGCCACGGGGTCGTAC GAACATGCCCAGGATGGATATGTGATCGCAAAGATGATCACGGACACCAAGACCATTTGTTCTGTCGGGTATGTG ATTTTACTACCTTTTTTTTTTGGGAAAGCTTATACAAAGAATCAGGTACATGCTGCGTTACCTCAAGGCTGTTCA ACTCATGAAACAAGTCATTGAGGAGAACAACTTGACTGTAATGTCCACTATTGCCCGTTATGCCGCTGCATATGA GGCTATTGCTAAGGCAGATTGGTGGGACAAATCGAAAAGGTTTTCGTTCTGTTTTTGGGGTTGATTATCTCTAAA TTTAACTTTACATCAAGCGGGGGCCCTATAATTGAACAAGGCACCCACTTTTGCGATCTTTCGCGTTATTTCGGT GGTGAAGTCGACCTTGAGAGCGTCCATGCTCATTCACTCGAGTGGGATGAAAATGCTGGCCAGTTGTCGCAAATG CGTATTGATGAGAGCAAGATAGCCCCGGAAAATAGGGTACCGCGTGCCACTGTAGCAACCTGGTAAGTTGAATAT GCGGTGATTGGATATTGATTTACCCTCCCATGTAGGAAATACGACAGTGGAGCTGTTGGAAGTTTTACACACGTT GCCTCTCTTCAAGGGACAGACTACAGTTGTGAATTCGAAGTCTACGCTGACGGATATCTTCTGAAGTATGCCCGT CAAAGCTCCCTGCGTGTACTTGCTAACTTCGGATAGACTTGTCAACCCTTACGTCCAACCAGTCCTCTACGTTCG AACTCCCGATGATGATCGTGAACGTGCATATTCTTTCCCAGATGACGATCCGTTCTTCTCCGAAGTTTCTCATCT CATTGATGTAATCGAGGATATTGAAGAGGACCCTGAAGCTGCTCAAATCCTTAGCTCGTATGAAGGTGGGTGCGA GCCACCAAATCACATGGCTAAGCAGGCTAACACATGGTGTAGATGCGGTAAGGACGTATGAATTCACTTGGGCTA TCCGTTCAGCTAGTGAGCGGTCCCGGGCAGCCAAACTCAAGGCTAGCCGCGACGGAGCTAAGGCGCAAAAAGAAA ATCAAACAGACTGA |