© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | AgabiH97|057860 |
| Gene name | |
| Location | scaffold_3:1261460..1262884 |
| Strand | + |
| Gene length (bp) | 1424 |
| Transcript length (bp) | 1158 |
| Coding sequence length (bp) | 1158 |
| Protein length (aa) | 386 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF10607 | CTLH | CTLH/CRA C-terminal to LisH motif domain | 1.8E-21 | 144 | 282 |
| PF13445 | zf-RING_UBOX | RING-type zinc-finger | 4.8E-07 | 329 | 369 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|O59668|YB83_SCHPO | LisH domain-containing protein C29A3.03c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC29A3.03c PE=3 SV=1 | 28 | 385 | 7.0E-71 |
| sp|Q91YQ7|RMD5B_MOUSE | Protein RMD5 homolog B OS=Mus musculus GN=Rmnd5b PE=2 SV=1 | 21 | 385 | 3.0E-64 |
| sp|Q640V2|RMD5A_XENTR | Protein RMD5 homolog A OS=Xenopus tropicalis GN=rmnd5a PE=2 SV=1 | 10 | 385 | 5.0E-64 |
| sp|Q80YQ8|RMD5A_MOUSE | Protein RMD5 homolog A OS=Mus musculus GN=Rmnd5a PE=1 SV=2 | 1 | 385 | 3.0E-63 |
| sp|Q9H871|RMD5A_HUMAN | Protein RMD5 homolog A OS=Homo sapiens GN=RMND5A PE=1 SV=1 | 1 | 385 | 3.0E-63 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|O59668|YB83_SCHPO | LisH domain-containing protein C29A3.03c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC29A3.03c PE=3 SV=1 | 28 | 385 | 7.0E-71 |
| sp|Q91YQ7|RMD5B_MOUSE | Protein RMD5 homolog B OS=Mus musculus GN=Rmnd5b PE=2 SV=1 | 21 | 385 | 3.0E-64 |
| sp|Q640V2|RMD5A_XENTR | Protein RMD5 homolog A OS=Xenopus tropicalis GN=rmnd5a PE=2 SV=1 | 10 | 385 | 5.0E-64 |
| sp|Q80YQ8|RMD5A_MOUSE | Protein RMD5 homolog A OS=Mus musculus GN=Rmnd5a PE=1 SV=2 | 1 | 385 | 3.0E-63 |
| sp|Q9H871|RMD5A_HUMAN | Protein RMD5 homolog A OS=Homo sapiens GN=RMND5A PE=1 SV=1 | 1 | 385 | 3.0E-63 |
| sp|Q96G75|RMD5B_HUMAN | Protein RMD5 homolog B OS=Homo sapiens GN=RMND5B PE=1 SV=1 | 21 | 385 | 5.0E-63 |
| sp|Q6GLP4|RMD5A_XENLA | Protein RMD5 homolog A OS=Xenopus laevis GN=rmnd5a PE=2 SV=1 | 72 | 385 | 4.0E-61 |
| sp|Q12508|RMD5_YEAST | Sporulation protein RMD5 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=RMD5 PE=3 SV=1 | 67 | 385 | 3.0E-24 |
| sp|Q4WTQ4|FYV10_ASPFU | Protein fyv10 OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=fyv10 PE=3 SV=2 | 58 | 264 | 8.0E-09 |
| sp|A1CZJ5|FYV10_NEOFI | Protein fyv10 OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=fyv10 PE=3 SV=2 | 45 | 233 | 1.0E-08 |
| sp|Q2H991|FYV10_CHAGB | Protein FYV10 OS=Chaetomium globosum (strain ATCC 6205 / CBS 148.51 / DSM 1962 / NBRC 6347 / NRRL 1970) GN=FYV10 PE=3 SV=1 | 49 | 235 | 1.0E-08 |
| sp|Q5AS80|FYV10_EMENI | Protein fyv10 OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=fyv10 PE=3 SV=2 | 31 | 288 | 3.0E-08 |
| sp|Q7S2X0|FYV10_NEUCR | Protein fyv-10 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=fyv-10 PE=3 SV=1 | 25 | 270 | 4.0E-08 |
| sp|Q0CA25|FYV10_ASPTN | Protein fyv10 OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) GN=fyv10 PE=3 SV=2 | 53 | 264 | 7.0E-08 |
| sp|A1C9R2|FYV10_ASPCL | Protein fyv10 OS=Aspergillus clavatus (strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1) GN=fyv10 PE=3 SV=1 | 93 | 233 | 1.0E-07 |
| sp|A2R9P6|FYV10_ASPNC | Protein fyv10 OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=fyv10 PE=3 SV=2 | 53 | 238 | 2.0E-07 |
| sp|A4RK04|FYV10_MAGO7 | Protein FYV10 OS=Magnaporthe oryzae (strain 70-15 / ATCC MYA-4617 / FGSC 8958) GN=FYV10 PE=3 SV=2 | 109 | 247 | 7.0E-07 |
| sp|Q1DTI6|FYV10_COCIM | Protein FYV10 OS=Coccidioides immitis (strain RS) GN=FYV10 PE=3 SV=1 | 51 | 235 | 5.0E-06 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 20 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >AgabiH97|057860 MDLPLKELAKLEKVATVKGKGPSISNALDDLLQSLQRAKEQVQAGSDISPEQFVTLTQEMETKKKEIDERQKEVY SATSRFGKTLDKRFPTPLPSYSNLFDSEDSVAALERTIALHFLGTGQFEAAETFLEESGIDIPQETRDQFEELHR ILKFVRSQDIGPALTWAKKHRDFLTSRSSPLEFFLHRSQYIRLLLSTHPPDPIPAVHYARTYLQPFFKDHEQEML RLMACVAFLPLAKLQVSSYADLASPKLHFDLEPLFAREYCASLGMSRQVPLRVVVDLGGGGALARIEKGRKVMRE RKSEWSQKDELPIEIPLPPENRYHSIFACPVSKEQATDQNPPMMMVCGHVISKDSLHKLSKAGGRVKCPYCPNEA PMSHALRVYF* |
| Coding | >AgabiH97|057860 ATGGATTTACCCCTCAAAGAACTCGCGAAACTCGAGAAAGTTGCCACAGTGAAAGGGAAAGGCCCTTCTATATCA AATGCCTTGGATGATCTCTTGCAGAGCCTGCAGCGTGCCAAGGAGCAAGTCCAGGCTGGCAGCGATATCAGCCCC GAGCAGTTCGTCACGCTGACGCAGGAGATGGAGACCAAGAAGAAGGAAATAGATGAAAGACAGAAAGAGGTCTAC TCTGCTACTTCTCGCTTTGGCAAAACGTTGGATAAGAGGTTCCCAACGCCTTTACCTTCCTATTCAAATTTGTTT GATTCAGAGGATTCCGTTGCTGCGCTCGAGCGAACAATCGCACTCCATTTTTTGGGGACTGGACAGTTCGAGGCT GCGGAGACTTTTCTAGAGGAATCTGGCATAGACATTCCCCAAGAAACGCGCGATCAATTTGAAGAGCTACATCGA ATTCTTAAGTTCGTTAGGTCTCAGGACATTGGCCCCGCTCTTACTTGGGCCAAGAAACACCGTGATTTCCTGACT TCCCGGTCATCACCTCTAGAATTCTTCCTTCACCGGTCCCAATACATTCGACTACTACTGTCTACTCATCCGCCT GATCCAATTCCTGCTGTCCATTATGCGCGGACTTATCTCCAACCATTTTTCAAGGATCATGAGCAGGAAATGTTA CGCCTCATGGCCTGCGTCGCTTTCCTTCCGCTAGCGAAGCTTCAAGTATCATCCTACGCAGATCTAGCATCACCT AAATTGCATTTCGACTTGGAGCCTCTTTTCGCGCGGGAATATTGCGCCAGCCTTGGGATGAGTCGACAGGTGCCA TTAAGAGTGGTTGTCGACCTTGGTGGAGGAGGAGCTTTGGCAAGGATTGAGAAGGGAAGGAAGGTTATGCGAGAG AGGAAGAGTGAGTGGAGTCAGAAAGACGAGTTGCCGATTGAGATACCGTTGCCTCCGGAGAACAGGTACCACTCG ATCTTTGCTTGCCCAGTGTCGAAGGAACAAGCAACAGACCAAAATCCACCTATGATGATGGTTTGTGGGCATGTC ATCTCCAAGGACAGTTTGCATAAACTGAGCAAGGCTGGAGGTCGTGTAAAATGTCCCTATTGCCCGAACGAAGCA CCCATGAGCCATGCGTTGAGAGTATATTTCTAG |
| Transcript | >AgabiH97|057860 ATGGATTTACCCCTCAAAGAACTCGCGAAACTCGAGAAAGTTGCCACAGTGAAAGGGAAAGGCCCTTCTATATCA AATGCCTTGGATGATCTCTTGCAGAGCCTGCAGCGTGCCAAGGAGCAAGTCCAGGCTGGCAGCGATATCAGCCCC GAGCAGTTCGTCACGCTGACGCAGGAGATGGAGACCAAGAAGAAGGAAATAGATGAAAGACAGAAAGAGGTCTAC TCTGCTACTTCTCGCTTTGGCAAAACGTTGGATAAGAGGTTCCCAACGCCTTTACCTTCCTATTCAAATTTGTTT GATTCAGAGGATTCCGTTGCTGCGCTCGAGCGAACAATCGCACTCCATTTTTTGGGGACTGGACAGTTCGAGGCT GCGGAGACTTTTCTAGAGGAATCTGGCATAGACATTCCCCAAGAAACGCGCGATCAATTTGAAGAGCTACATCGA ATTCTTAAGTTCGTTAGGTCTCAGGACATTGGCCCCGCTCTTACTTGGGCCAAGAAACACCGTGATTTCCTGACT TCCCGGTCATCACCTCTAGAATTCTTCCTTCACCGGTCCCAATACATTCGACTACTACTGTCTACTCATCCGCCT GATCCAATTCCTGCTGTCCATTATGCGCGGACTTATCTCCAACCATTTTTCAAGGATCATGAGCAGGAAATGTTA CGCCTCATGGCCTGCGTCGCTTTCCTTCCGCTAGCGAAGCTTCAAGTATCATCCTACGCAGATCTAGCATCACCT AAATTGCATTTCGACTTGGAGCCTCTTTTCGCGCGGGAATATTGCGCCAGCCTTGGGATGAGTCGACAGGTGCCA TTAAGAGTGGTTGTCGACCTTGGTGGAGGAGGAGCTTTGGCAAGGATTGAGAAGGGAAGGAAGGTTATGCGAGAG AGGAAGAGTGAGTGGAGTCAGAAAGACGAGTTGCCGATTGAGATACCGTTGCCTCCGGAGAACAGGTACCACTCG ATCTTTGCTTGCCCAGTGTCGAAGGAACAAGCAACAGACCAAAATCCACCTATGATGATGGTTTGTGGGCATGTC ATCTCCAAGGACAGTTTGCATAAACTGAGCAAGGCTGGAGGTCGTGTAAAATGTCCCTATTGCCCGAACGAAGCA CCCATGAGCCATGCGTTGAGAGTATATTTCTAG |
| Gene | >AgabiH97|057860 ATGGATTTACCCCTCAAAGAACTCGCGAAACTCGAGAAAGTTGCCACAGTGAAAGGGAAAGGCCCTTCTATATCA AATGCCTTGGATGATCTCTTGCAGAGCCTGCAGCGTGCCAAGGAGCAAGTCCAGGCTGGCAGCGATATCAGCCCC GAGCAGTTCGTCACGCTGACGCAGGAGATGGAGACCAAGAAGAAGGAAATAGATGAAAGACAGAAAGAGGTCTAC TCTGCTACTTCTCGCTTTGGCAAAACGTTGGATAAGGTATGCAAAATATAAGAACAGTATGTGCGGTCTTTCTGA TGAATCGGACAATAGAGGTTCCCAACGCCTTTACCTTCCTATTCAAATTTGTTTGATTCAGAGGATTCCGTTGCT GCGCTCGAGCGAACAATCGCACTCCATTTTTTGGGGACTGGACAGTTCGAGGCTGCGGAGACTTTTCTAGAGGCA AGCAATCAAATGAGGTTTCACCACTATAACTCTGCAACATTTCGTATAGGAATCTGGCATAGACATTCCCCAAGA AACGCGCGATCAATTTGAAGAGCTACATCGAATTCTTAAGTTCGTTAGGTCTCAGGACATTGGCCCCGCTCTTAC GTGTGTGTTGCATAATATCTCGATAACACCTTTCTTCTGACATAGTGTTTCAGTTGGGCCAAGAAACACCGTGAT TTCCTGACTTCCCGGTCATCACCTCTAGAATTCTTCCTTCACCGGTCCCAATACATTCGACTACTACTGTCTACT CATCCGCCTGATCCAATTCCTGCTGTCCATTATGCGCGGACTTATCTCCAACCATTTTTCAAGGATCATGAGCAG GAAATGTTACGCCTCATGGCCTGCGTCGCTTTCCTTCCGCTAGCGAAGCTTCAAGTATCATCCTACGCAGATCTA GCATCACCTAAATTGCATTTCGACTTGGAGCCTCTTTTCGCGCGGGAATATTGCGCCAGCCTTGGGATGAGTCGA CAGGTGCCATTAAGAGTGGTTGTCGACCTTGGTGGAGGAGGAGCTTTGGCAAGGATTGAGAAGGGAAGGAAGGTT ATGCGAGAGAGGAAGAGTGAGTGGAGTCAGAAAGACGAGTTGCCGGTAAGTGCATGTTTTCTGTCTGTTCTGTAT CCGATGCTGACGCTGCTGAAATAGATTGAGATACCGTTGCCTCCGGAGAACAGGTACCACTCGATCTTTGCTTGC CCAGTGTCGAAGGAACAAGCAACAGACCAAAATCCACCTATGATGATGGTTTGTGGGCATGTCATCTCCAAGGAC AGTTTGCATAAACTGAGCAAGGCTGGAGGGTAAGCTGTGCTAGAACCTCATGCCGCACTTTTGTTCTAATCTGGT TCTATAGTCGTGTAAAATGTCCCTATTGCCCGAACGAAGCACCCATGAGCCATGCGTTGAGAGTATATTTCTAG |