© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | AgabiH97|057830 |
| Gene name | |
| Location | scaffold_3:1257090..1257722 |
| Strand | + |
| Gene length (bp) | 632 |
| Transcript length (bp) | 408 |
| Coding sequence length (bp) | 408 |
| Protein length (aa) | 136 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00378 | ECH_1 | Enoyl-CoA hydratase/isomerase | 9.5E-10 | 3 | 68 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q08558|DCI1_YEAST | Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=DCI1 PE=1 SV=1 | 4 | 135 | 1.0E-11 |
| sp|Q05871|ECI1_YEAST | 3,2-trans-enoyl-CoA isomerase OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ECI1 PE=1 SV=1 | 4 | 135 | 2.0E-11 |
| sp|Q9WUR2|ECI2_MOUSE | Enoyl-CoA delta isomerase 2, mitochondrial OS=Mus musculus GN=Eci2 PE=1 SV=2 | 3 | 116 | 1.0E-08 |
| sp|Q5XIC0|ECI2_RAT | Enoyl-CoA delta isomerase 2, mitochondrial OS=Rattus norvegicus GN=Eci2 PE=1 SV=1 | 3 | 116 | 1.0E-08 |
| sp|O75521|ECI2_HUMAN | Enoyl-CoA delta isomerase 2, mitochondrial OS=Homo sapiens GN=ECI2 PE=1 SV=4 | 3 | 116 | 1.0E-07 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q08558|DCI1_YEAST | Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=DCI1 PE=1 SV=1 | 4 | 135 | 1.0E-11 |
| sp|Q05871|ECI1_YEAST | 3,2-trans-enoyl-CoA isomerase OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ECI1 PE=1 SV=1 | 4 | 135 | 2.0E-11 |
| sp|Q9WUR2|ECI2_MOUSE | Enoyl-CoA delta isomerase 2, mitochondrial OS=Mus musculus GN=Eci2 PE=1 SV=2 | 3 | 116 | 1.0E-08 |
| sp|Q5XIC0|ECI2_RAT | Enoyl-CoA delta isomerase 2, mitochondrial OS=Rattus norvegicus GN=Eci2 PE=1 SV=1 | 3 | 116 | 1.0E-08 |
| sp|O75521|ECI2_HUMAN | Enoyl-CoA delta isomerase 2, mitochondrial OS=Homo sapiens GN=ECI2 PE=1 SV=4 | 3 | 116 | 1.0E-07 |
| sp|Q78JN3|ECI3_MOUSE | Enoyl-CoA delta isomerase 3, peroxisomal OS=Mus musculus GN=Eci3 PE=1 SV=1 | 3 | 113 | 3.0E-07 |
| sp|Q9Y6F8|CDY1_HUMAN | Testis-specific chromodomain protein Y 1 OS=Homo sapiens GN=CDY1 PE=1 SV=1 | 3 | 116 | 6.0E-07 |
| sp|Q8N8U2|CDYL2_HUMAN | Chromodomain Y-like protein 2 OS=Homo sapiens GN=CDYL2 PE=1 SV=2 | 3 | 116 | 1.0E-06 |
| sp|Q9Y232|CDYL1_HUMAN | Chromodomain Y-like protein OS=Homo sapiens GN=CDYL PE=1 SV=2 | 3 | 106 | 3.0E-06 |
| sp|Q6AYK9|CDYL_RAT | Chromodomain Y-like protein OS=Rattus norvegicus GN=Cdyl PE=1 SV=1 | 3 | 109 | 4.0E-06 |
| sp|Q9D5D8|CDYL2_MOUSE | Chromodomain Y-like protein 2 OS=Mus musculus GN=Cdyl2 PE=1 SV=1 | 3 | 116 | 5.0E-06 |
| sp|Q9WTK2|CDYL_MOUSE | Chromodomain Y-like protein OS=Mus musculus GN=Cdyl PE=1 SV=1 | 3 | 106 | 7.0E-06 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0003824 | catalytic activity | Yes |
| GO:0003674 | molecular_function | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 19 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >AgabiH97|057830 MSTPFTFLAIVAEGGASASFVNRMGVAKANEMLIWGKKKEAQELLECGFINKIFPQQSVESFHREVRDLLKFELQ GLDPAAILKVKSLIKAGLNDKNDFDAINLRESYAQAERFSSGAPFKRFSMIANKEIRHKL* |
| Coding | >AgabiH97|057830 ATGTCCACACCTTTTACATTCCTTGCTATCGTCGCCGAGGGCGGCGCCAGTGCCAGTTTTGTTAACAGGATGGGT GTTGCAAAGGCGAACGAGATGTTAATATGGGGAAAGAAAAAAGAAGCTCAAGAACTTTTGGAATGTGGATTTATT AACAAAATCTTCCCACAGCAATCTGTAGAATCTTTCCATCGAGAAGTTCGCGATCTCTTAAAATTCGAGCTTCAA GGACTTGATCCTGCCGCTATTCTCAAAGTCAAGTCGTTGATCAAAGCTGGCCTGAATGATAAAAACGACTTTGAC GCTATCAATCTTCGGGAAAGTTATGCTCAGGCAGAAAGGTTCTCGAGTGGCGCCCCTTTCAAGCGGTTCTCGATG ATTGCCAACAAGGAAATCCGGCATAAATTGTAA |
| Transcript | >AgabiH97|057830 ATGTCCACACCTTTTACATTCCTTGCTATCGTCGCCGAGGGCGGCGCCAGTGCCAGTTTTGTTAACAGGATGGGT GTTGCAAAGGCGAACGAGATGTTAATATGGGGAAAGAAAAAAGAAGCTCAAGAACTTTTGGAATGTGGATTTATT AACAAAATCTTCCCACAGCAATCTGTAGAATCTTTCCATCGAGAAGTTCGCGATCTCTTAAAATTCGAGCTTCAA GGACTTGATCCTGCCGCTATTCTCAAAGTCAAGTCGTTGATCAAAGCTGGCCTGAATGATAAAAACGACTTTGAC GCTATCAATCTTCGGGAAAGTTATGCTCAGGCAGAAAGGTTCTCGAGTGGCGCCCCTTTCAAGCGGTTCTCGATG ATTGCCAACAAGGAAATCCGGCATAAATTGTAA |
| Gene | >AgabiH97|057830 ATGTCCACACCTTTTACATTCCTTGGTCAGTTTCCTTTTCGTTAGGCCATTAACGCAAACTATACGCTTGGTGAT TATAGCTATCGTCGCCGAGGGCGGCGCCAGTGCCAGTTTTGTTAACAGGAGTGAGTGAATTTGGAAGAGCCACTT AACGCTCTCAATTTACCCGTGCACAGTGGGTGTTGCAAAGGCGAACGAGATGTTAATATGGGGAAAGAAAAAAGA AGCTCAAGAACTTTTGGAATGTGGATTTATTAAGTAGGTTCACCACTTTTATAACCCAAGTACTCGTCCAAACAA AACCTGGCCCCAGCAAAATCTTCCCACAGCAATCTGTAGAATCTTTCCATCGAGAAGTTCGCGATCTCTTAAAAT TCGAGCTTCAAGGACTTGATCCTGCCGCTATTCTCAAAGTCAAGTCGTTGATCAAAGCTGGCCTGAATGATAAAA ACGACTTTGACGCTATCAATCTTCGGGAAAGTTATGGTAAGATTTAATACATATCTTGTTTATCAAAGTTAGGTA ACTTGGGCCCTCCCGATGTTGCAGCTCAGGCAGAAAGGTTCTCGAGTGGCGCCCCTTTCAAGCGGTTCTCGATGA TTGCCAACAAGGAAATCCGGCATAAATTGTAA |