Fungal Genomics

General Properties

Protein ID	AgabiH97|056150
Gene name
Location	scaffold_3:852260..853889
Strand	-
Gene length (bp)	1629
Transcript length (bp)	1317
Coding sequence length (bp)	1317
Protein length (aa)	439

Overview

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PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF01341	Glyco_hydro_6	Glycosyl hydrolases family 6	7.5E-112	107	402
PF00734	CBM_1	Fungal cellulose binding domain	3.4E-14	25	52

Swissprot hits

GO

GO Term	Description	Terminal node
GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	Yes
GO:0030245	cellulose catabolic process	Yes
GO:0030248	cellulose binding	Yes
GO:0005975	carbohydrate metabolic process	Yes
GO:0005576	extracellular region	Yes
GO:0044248	cellular catabolic process	No
GO:0008152	metabolic process	No
GO:0006073	cellular glucan metabolic process	No
GO:0005976	polysaccharide metabolic process	No
GO:0009056	catabolic process	No
GO:0051273	beta-glucan metabolic process	No
GO:0008150	biological_process	No
GO:0071704	organic substance metabolic process	No
GO:0000272	polysaccharide catabolic process	No
GO:0044042	glucan metabolic process	No
GO:0005575	cellular_component	No
GO:0005488	binding	No
GO:0030247	polysaccharide binding	No
GO:0016787	hydrolase activity	No
GO:0110165	cellular anatomical entity	No
GO:0044264	cellular polysaccharide metabolic process	No
GO:0044238	primary metabolic process	No
GO:0016798	hydrolase activity, acting on glycosyl bonds	No
GO:0044260	cellular macromolecule metabolic process	No
GO:0044237	cellular metabolic process	No
GO:0009057	macromolecule catabolic process	No
GO:0003824	catalytic activity	No
GO:0009987	cellular process	No
GO:0044262	cellular carbohydrate metabolic process	No
GO:0030243	cellulose metabolic process	No
GO:0009251	glucan catabolic process	No
GO:0051275	beta-glucan catabolic process	No
GO:0016052	carbohydrate catabolic process	No
GO:0003674	molecular_function	No
GO:0044247	cellular polysaccharide catabolic process	No
GO:0044275	cellular carbohydrate catabolic process	No
GO:0043170	macromolecule metabolic process	No
GO:1901575	organic substance catabolic process	No
GO:0030246	carbohydrate binding	No

Deeploc

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Localizations	Signals	Cytoplasm	Nucleus	Extracellular	Cell membrane	Mitochondrion	Plastid	Endoplasmic reticulum	Lysosome vacuole	Golgi apparatus	Peroxisome
Extracellular	Signal peptide	0.1287	0.1346	0.9225	0.1869	0.1185	0.0042	0.0852	0.161	0.1779	0.0014

SignalP

SignalP signal predicted	Location	Score
Yes	1 - 20	0.999775

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

CAZyme category	E-value	Start	End
CBM1	1.2E-16	25	52
GH6	3.4E-100	108	398

Secondary Metabolism

(None)

Expression data

Analysis 1: Developmental stages of Agaricus bisporus (strain A15). Published in Pelkmans et al, Applied Microbiology and Biotechnology, 2016

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Orthologs

Orthofinder run ID	1
Orthogroup	1955
Change Orthofinder run	1: Agaricomycetes 5: Agaricus - all strains

Species	Protein ID
Agaricus bisporus var bisporus H39	AgabiH39|056150
Agaricus bisporus var bisporus H97	AgabiH97|056150 (this protein)

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus Download genbank file of locus (reverse complement) The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>AgabiH97|056150 MFKFAALLALASLVPGFVQAQSPVWGQCGGNGWTGPTTCASGSTCVKQNDFYSQCLPNNQAPPSTTTQPGTTPPA TTTSGGTGPTSGAGNPYTGKTVWLSPFYADEVAQAAADISNPSLATKAASVAKIPTFVWFDTVAKVPDLGGYLAD ARSKNQLVQIVVYDLPDRDCAALASNGEFSLANDGLNKYKNYVDQIAAQIKQFPDVSVVAVIEPDSLANLVTNLN VQKCANAQSAYKEGVIYAVQKLNAVGVTMYIDAGHAGWLGWPANLSPAAQLFAQIYRDAGSPRNLRGIATNVANF NALRASSPDPITQGNSNYDEIHYIEALAPMLSNAGFPAHFIVDQGRSGVQNIRDQWGDWCNVKGAGFGQRPTTNT GSSLIDAIVWVKPGGECDGTSDNSSPRFDSHCSLSDAHQPAPEAGTWFQAYFETLVANANPAL*
Coding	>AgabiH97|056150 ATGTTCAAATTCGCTGCTCTACTAGCTTTGGCTTCGCTCGTCCCAGGCTTTGTCCAGGCTCAGTCACCTGTATGG GGTCAATGCGGTGGTAATGGCTGGACTGGCCCGACAACCTGCGCTTCGGGCTCAACCTGCGTGAAGCAGAATGAT TTCTATTCTCAGTGCCTTCCCAACAATCAAGCTCCTCCTTCCACAACTACACAGCCTGGCACCACACCCCCCGCC ACCACCACTTCCGGCGGCACAGGGCCTACTTCAGGTGCTGGAAACCCTTATACCGGTAAAACGGTCTGGCTGTCA CCGTTCTATGCCGACGAGGTCGCGCAAGCGGCCGCTGATATATCCAATCCTAGTTTGGCAACCAAGGCTGCTTCG GTTGCTAAAATCCCTACCTTCGTTTGGTTTGATACGGTTGCCAAGGTTCCCGACCTCGGTGGCTACCTTGCCGAT GCCCGGTCCAAGAACCAGCTCGTTCAAATTGTTGTCTACGATCTGCCCGACCGTGACTGCGCCGCCCTCGCCTCT AACGGAGAGTTCTCTCTCGCCAATGATGGCCTCAACAAGTATAAGAACTATGTTGACCAGATTGCGGCCCAGATT AAGCAGTTCCCTGACGTATCCGTCGTGGCTGTCATTGAGCCTGACTCGCTCGCTAATTTGGTCACAAATTTGAAC GTCCAAAAATGTGCTAACGCCCAAAGCGCTTACAAGGAGGGTGTCATTTACGCTGTCCAAAAACTTAACGCAGTT GGTGTTACCATGTACATCGATGCTGGCCATGCTGGATGGTTGGGCTGGCCTGCTAATCTGTCCCCTGCCGCCCAA CTCTTTGCCCAAATCTACAGAGACGCTGGCTCGCCCAGAAACCTTCGTGGTATCGCCACGAACGTTGCCAACTTC AACGCCCTTAGAGCTTCCTCTCCCGATCCTATCACTCAGGGCAACAGTAATTATGACGAAATACACTACATTGAA GCTCTTGCTCCCATGCTCAGTAATGCTGGTTTCCCTGCTCACTTCATCGTCGACCAAGGTCGCTCGGGTGTTCAG AATATCAGAGACCAGTGGGGCGACTGGTGCAACGTCAAGGGTGCTGGCTTCGGTCAACGACCGACAACAAATACT GGCTCCTCGCTCATCGATGCTATTGTCTGGGTCAAGCCAGGTGGCGAATGCGACGGTACCTCAGACAATTCATCC CCTCGGTTCGACTCGCATTGCTCTCTTAGCGACGCTCATCAACCCGCTCCTGAGGCTGGTACCTGGTTCCAAGCT TACTTTGAGACCTTGGTTGCGAATGCCAACCCTGCCCTTTAA
Transcript	>AgabiH97|056150 ATGTTCAAATTCGCTGCTCTACTAGCTTTGGCTTCGCTCGTCCCAGGCTTTGTCCAGGCTCAGTCACCTGTATGG GGTCAATGCGGTGGTAATGGCTGGACTGGCCCGACAACCTGCGCTTCGGGCTCAACCTGCGTGAAGCAGAATGAT TTCTATTCTCAGTGCCTTCCCAACAATCAAGCTCCTCCTTCCACAACTACACAGCCTGGCACCACACCCCCCGCC ACCACCACTTCCGGCGGCACAGGGCCTACTTCAGGTGCTGGAAACCCTTATACCGGTAAAACGGTCTGGCTGTCA CCGTTCTATGCCGACGAGGTCGCGCAAGCGGCCGCTGATATATCCAATCCTAGTTTGGCAACCAAGGCTGCTTCG GTTGCTAAAATCCCTACCTTCGTTTGGTTTGATACGGTTGCCAAGGTTCCCGACCTCGGTGGCTACCTTGCCGAT GCCCGGTCCAAGAACCAGCTCGTTCAAATTGTTGTCTACGATCTGCCCGACCGTGACTGCGCCGCCCTCGCCTCT AACGGAGAGTTCTCTCTCGCCAATGATGGCCTCAACAAGTATAAGAACTATGTTGACCAGATTGCGGCCCAGATT AAGCAGTTCCCTGACGTATCCGTCGTGGCTGTCATTGAGCCTGACTCGCTCGCTAATTTGGTCACAAATTTGAAC GTCCAAAAATGTGCTAACGCCCAAAGCGCTTACAAGGAGGGTGTCATTTACGCTGTCCAAAAACTTAACGCAGTT GGTGTTACCATGTACATCGATGCTGGCCATGCTGGATGGTTGGGCTGGCCTGCTAATCTGTCCCCTGCCGCCCAA CTCTTTGCCCAAATCTACAGAGACGCTGGCTCGCCCAGAAACCTTCGTGGTATCGCCACGAACGTTGCCAACTTC AACGCCCTTAGAGCTTCCTCTCCCGATCCTATCACTCAGGGCAACAGTAATTATGACGAAATACACTACATTGAA GCTCTTGCTCCCATGCTCAGTAATGCTGGTTTCCCTGCTCACTTCATCGTCGACCAAGGTCGCTCGGGTGTTCAG AATATCAGAGACCAGTGGGGCGACTGGTGCAACGTCAAGGGTGCTGGCTTCGGTCAACGACCGACAACAAATACT GGCTCCTCGCTCATCGATGCTATTGTCTGGGTCAAGCCAGGTGGCGAATGCGACGGTACCTCAGACAATTCATCC CCTCGGTTCGACTCGCATTGCTCTCTTAGCGACGCTCATCAACCCGCTCCTGAGGCTGGTACCTGGTTCCAAGCT TACTTTGAGACCTTGGTTGCGAATGCCAACCCTGCCCTTTAA
Gene	>AgabiH97|056150 ATGTTCAAATTCGCTGCTCTACTAGCTTTGGCTTCGCTCGTCCCAGGCTTTGTCCAGGCTCAGTCACCTGTATGG GGTCAATGCGGTGGTAATGGCTGGAGTAAGTGGTGACACAGGAAGGGAATTTATCTCACCTGTGTTTCATATGAT AGCTGGCCCGACAACCTGCGCTTCGGGCTCAACCTGCGTGAAGCAGAATGATTTCTATTCTCAGTGCCTGTACGT ATATACTTTATGTCGAAGCAACCACAGAGATCAAACAAAACGTAGTCCCAACAATCAAGCTCCTCCTTCCACAAC TACACAGCCTGGCACCACACCCCCCGCCACCACCACTTCCGGCGGCACAGGGCCTACTTCAGGTGCTGGAAACCC TTATACCGGTAAAACGGTACGTGATTACTTGTCACCTCTTTGCCAACATTTTCATCTTTCTAACAGGTCTGGCTG TCACCGTTCTATGCCGACGAGGTCGCGCAAGCGGCCGCTGATATATCCAATCCTAGTTTGGCAACCAAGGCTGCT TCGGTTGCTAAAATCCCTACCTTCGTTTGGTTTGATACGGTTGCCAAGGTTCCCGACCTCGGTGGCTACCTTGCC GATGCCCGGTCCAAGAACCAGCTCGTTCAAATTGTTGTCTACGATCTGCCCGACCGTGACTGCGCCGCCCTCGCC TCTAACGGAGAGTTCTCTCTCGCCAATGATGGCCTCAACAAGTATAAGAACTATGTTGACCAGATTGCGGCCCAG ATTAAGCGTACGGTTTCTGCATTCCGTCATGTTTCCGAACGCTAACTTGGAATTTTCAGAGTTCCCTGACGTATC CGTCGTGGCTGTCATTGAGCCTGACTCGCTCGCTAATTTGGTCACAAATTTGAACGTCCAAAAATGTGCTAACGC CCAAAGCGCTTACAAGGAGGGTGTCATTTACGCTGTCCAAAAACTTAACGCAGTTGGTGTTACCATGTACATCGA TGCTGGCCATGCTGGATGGTTGGGCTGGCCTGCTAATCTGTCCCCTGCCGCCCAACTCTTTGCCCAAATCTACAG AGACGCTGGCTCGCCCAGAAACCTTCGTGGTATCGCCACGAACGTTGCCAACTTCAACGCCCTTAGAGCTTCCTC TCCCGATCCTATCACTCAGGGCAACAGTAATTATGACGAAATACACTACATTGAAGTCAGTTGCGGCATTTGCTA TGATCACTGTTGTTGGGTGCTAATATCAATTACAGGCTCTTGCTCCCATGCTCAGTAATGCTGGTTTCCCTGCTC ACTTCATCGTCGACCAAGGTCGCTCGGGTGTTCAGAATATCAGAGACCAGTGGGGCGACTGGTGCAACGTCAAGG GTGCTGGCTTCGGTCAACGACCGACAACAAATACTGGCTCCTCGCTCATCGATGCTATTGTCTGGGTCAAGCCAG GTGGCGAATGCGACGGTACCTCAGACAATTCATCCCCTCGGTTCGACTCGCATTGCTCTCTTAGGTGAGTATATC ACCTTCAATTTTTTGGGTCTATTGCTAACGAAACTTCGCAGCGACGCTCATCAACCCGCTCCTGAGGCTGGTACC TGGTTCCAAGCTTACTTTGAGACCTTGGTTGCGAATGCCAACCCTGCCCTTTAA