Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabiH97|055970
Gene name
Locationscaffold_3:811320..812613
Strand-
Gene length (bp)1293
Transcript length (bp)960
Coding sequence length (bp)960
Protein length (aa) 320

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 21 0.45

Transmembrane Domains

Domain # Start End Length
1 199 221 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Developmental stages of Agaricus bisporus (strain A15). Published in Pelkmans et al, Applied Microbiology and Biotechnology, 2016

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >AgabiH97|055970
MTERFYLSLVVLKIAASVFAQTSDVTQCIPEFQWSINALGQNPCLVGAYLETLCSSQPFSVNALPQGNHYIGPST
DNADPCFCNSVTYSMISACAGCQDRRFSNFTMWTLNCRQSDVAIGQYPRTIPFTTQVPSWATLNISLTNDTFNPF
AAQREAAREAALPSTTRSSSSTSATSTTATRATQSTSDSEDSSGLSSGAIAGITVGALIAVITILLALLWMKLRS
KKRNSKKQDDLNSVYQPPKASHSQHIHSRSMSDPASIISPYTYSASEGGRHPPSEISTTYTTVPPMRSLEDSVSP
APPLSTITSPRGYTGAAEV*
Coding >AgabiH97|055970
ATGACAGAGAGGTTTTATCTTTCCCTAGTGGTGTTAAAGATCGCCGCTAGTGTTTTCGCGCAGACCTCAGACGTT
ACTCAATGCATTCCGGAATTTCAGTGGTCTATCAACGCCCTTGGTCAAAATCCTTGCCTTGTAGGGGCATATCTA
GAGACACTTTGTTCGAGCCAACCTTTCTCTGTAAACGCATTGCCGCAGGGAAACCATTATATTGGGCCCAGTACT
GATAATGCGGATCCATGTTTCTGCAATTCTGTGACGTATTCGATGATCAGTGCTTGTGCTGGATGCCAGGATAGA
CGTTTCTCAAACTTTACGATGTGGACATTGAATTGTCGTCAGTCCGATGTGGCGATTGGCCAATATCCAAGGACA
ATCCCCTTCACTACTCAAGTTCCTTCGTGGGCCACTCTCAATATATCATTGACGAATGATACGTTTAATCCGTTT
GCAGCTCAAAGAGAAGCGGCCAGGGAGGCTGCCTTACCCAGTACTACAAGGTCTAGTTCTTCTACAAGTGCGACC
AGTACAACAGCCACTAGAGCGACGCAATCAACCTCAGATAGCGAAGATTCTAGCGGTCTGAGCTCAGGCGCTATT
GCTGGCATCACAGTCGGTGCTTTGATTGCTGTTATTACCATCCTGCTGGCTTTACTTTGGATGAAGCTTCGATCG
AAGAAGCGGAATAGTAAAAAACAAGATGATCTCAACTCCGTGTATCAACCTCCTAAAGCAAGTCATTCTCAGCAT
ATACACTCGAGGTCTATGTCAGATCCCGCATCCATTATCTCGCCATATACGTATAGCGCGTCCGAAGGAGGCCGC
CATCCCCCCTCGGAAATTTCCACCACATATACAACGGTTCCCCCGATGCGATCCTTGGAGGACTCGGTCTCTCCC
GCTCCACCACTCAGTACTATAACAAGCCCTCGCGGCTACACGGGAGCCGCGGAAGTTTGA
Transcript >AgabiH97|055970
ATGACAGAGAGGTTTTATCTTTCCCTAGTGGTGTTAAAGATCGCCGCTAGTGTTTTCGCGCAGACCTCAGACGTT
ACTCAATGCATTCCGGAATTTCAGTGGTCTATCAACGCCCTTGGTCAAAATCCTTGCCTTGTAGGGGCATATCTA
GAGACACTTTGTTCGAGCCAACCTTTCTCTGTAAACGCATTGCCGCAGGGAAACCATTATATTGGGCCCAGTACT
GATAATGCGGATCCATGTTTCTGCAATTCTGTGACGTATTCGATGATCAGTGCTTGTGCTGGATGCCAGGATAGA
CGTTTCTCAAACTTTACGATGTGGACATTGAATTGTCGTCAGTCCGATGTGGCGATTGGCCAATATCCAAGGACA
ATCCCCTTCACTACTCAAGTTCCTTCGTGGGCCACTCTCAATATATCATTGACGAATGATACGTTTAATCCGTTT
GCAGCTCAAAGAGAAGCGGCCAGGGAGGCTGCCTTACCCAGTACTACAAGGTCTAGTTCTTCTACAAGTGCGACC
AGTACAACAGCCACTAGAGCGACGCAATCAACCTCAGATAGCGAAGATTCTAGCGGTCTGAGCTCAGGCGCTATT
GCTGGCATCACAGTCGGTGCTTTGATTGCTGTTATTACCATCCTGCTGGCTTTACTTTGGATGAAGCTTCGATCG
AAGAAGCGGAATAGTAAAAAACAAGATGATCTCAACTCCGTGTATCAACCTCCTAAAGCAAGTCATTCTCAGCAT
ATACACTCGAGGTCTATGTCAGATCCCGCATCCATTATCTCGCCATATACGTATAGCGCGTCCGAAGGAGGCCGC
CATCCCCCCTCGGAAATTTCCACCACATATACAACGGTTCCCCCGATGCGATCCTTGGAGGACTCGGTCTCTCCC
GCTCCACCACTCAGTACTATAACAAGCCCTCGCGGCTACACGGGAGCCGCGGAAGTTTGA
Gene >AgabiH97|055970
ATGACAGAGAGGTTTTATCTTTCCCTAGTGGTGTTAAAGATCGCCGCTAGTGTTTTCGCGCAGACCTCAGACGTT
ACTCAATGCATTCCGGAATTTCAGTGGGTAAGAGCGATTTGGAACGAACAGCGAGTCAATTGATATAGCGTGCTT
CGGTCTAGTCTATCAACGCCCTTGGTCAAAATCCTTGCCTTGTAGGGGCATATCTAGAGACACTTTGTTCGAGCC
AACGTATGTTTCCTCGATCACGGTGTATATTGATGGCGACTAACGTATCACGCAGCTTTCTCTGTAAACGCATTG
CCGCAGGGAAACCATTATATTGGGCCCAGTACTGATAATGCGGATCCATGTTTCTGCAATTCTGTGACGTATTCG
ATGATCAGTGCTTGTGCTGGATGCCAGGATAGACGTTTCTCAAACTTTACGATGTGGACATTGAATTGTCGTCAG
TCCGATGTGGCGATTGGCCAGTAAGTTGAACAAATAAATTATACAGGTCGTGCCTAATATTATACCCATCACAAG
ATATCCAAGGACAATCCCCTTCACTACTCAAGTTCCTTCGTGGGCCACTCTCAATATATCATTGGTGAGTGTGCT
GAACCTGACATACCTATAGTAGCCTCTTCTGACTTCCATTCGTTTCTTCAGACGAATGATACGTTTAATCCGTTT
GCAGCTCAAAGAGGTGCGATGCACTTCCAAGCTTATGAAGACATGCATAACTCACCCTCCAAGCAGAAGCGGCCA
GGGAGGCTGCCTTACCCAGTACTACAAGGTCTAGTTCTTCTACAAGTGCGACCAGTACAACAGCCACTAGAGCGA
CGCAATCAACCTCAGATAGCGAAGATTCTAGCGGTCTGAGCTCAGGCGCTATTGCTGGCATCACAGTCGGTGCTT
TGATTGCTGTTATTACCATCCTGCTGGCTTTACTTTGGATGAAGCTTCGATCGAAGAAGCGGAATAGTAAAAAAC
AAGATGATCTCAACTCCGTGTATCAACCTCCTAAAGCAAGTCATTCTCAGCATATACACTCGAGGTCTATGTCAG
ATCCCGCATCCATTATCTCGCCATATACGTATGTAAGTAATCGCTGTATTTCTATCTTAACGTAAACCCCAGACT
GATTTTGAGCAGAGCGCGTCCGAAGGAGGCCGCCATCCCCCCTCGGAAATTTCCACCACATATACAACGGTTCCC
CCGATGCGATCCTTGGAGGACTCGGTCTCTCCCGCTCCACCACTCAGTACTATAACAAGCCCTCGCGGCTACACG
GGAGCCGCGGAAGTTTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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