Protein ID | AgabiH97|055950 |
Gene name | |
Location | scaffold_3:807655..809251 |
Strand | - |
Gene length (bp) | 1596 |
Transcript length (bp) | 1380 |
Coding sequence length (bp) | 1380 |
Protein length (aa) | 460 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF03357 | Snf7 | Snf7 | 6.8E-18 | 271 | 431 |
Swissprot ID | Swissprot Description | Start | End | E-value |
---|---|---|---|---|
sp|O94730|YG0I_SCHPO | Uncharacterized protein C1604.18c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC1604.18c PE=3 SV=1 | 23 | 442 | 4.0E-23 |
sp|Q5ZJB7|CHMP7_CHICK | Charged multivesicular body protein 7 OS=Gallus gallus GN=CHMP7 PE=2 SV=1 | 96 | 437 | 9.0E-12 |
sp|Q8R1T1|CHMP7_MOUSE | Charged multivesicular body protein 7 OS=Mus musculus GN=Chmp7 PE=1 SV=1 | 26 | 455 | 3.0E-11 |
sp|Q5R812|CHMP7_PONAB | Charged multivesicular body protein 7 OS=Pongo abelii GN=CHMP7 PE=2 SV=1 | 26 | 429 | 2.0E-10 |
sp|Q8WUX9|CHMP7_HUMAN | Charged multivesicular body protein 7 OS=Homo sapiens GN=CHMP7 PE=1 SV=1 | 26 | 429 | 6.0E-10 |
Swissprot ID | Swissprot Description | Start | End | E-value |
---|---|---|---|---|
sp|O94730|YG0I_SCHPO | Uncharacterized protein C1604.18c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC1604.18c PE=3 SV=1 | 23 | 442 | 4.0E-23 |
sp|Q5ZJB7|CHMP7_CHICK | Charged multivesicular body protein 7 OS=Gallus gallus GN=CHMP7 PE=2 SV=1 | 96 | 437 | 9.0E-12 |
sp|Q8R1T1|CHMP7_MOUSE | Charged multivesicular body protein 7 OS=Mus musculus GN=Chmp7 PE=1 SV=1 | 26 | 455 | 3.0E-11 |
sp|Q5R812|CHMP7_PONAB | Charged multivesicular body protein 7 OS=Pongo abelii GN=CHMP7 PE=2 SV=1 | 26 | 429 | 2.0E-10 |
sp|Q8WUX9|CHMP7_HUMAN | Charged multivesicular body protein 7 OS=Homo sapiens GN=CHMP7 PE=1 SV=1 | 26 | 429 | 6.0E-10 |
sp|Q86K93|CHMP7_DICDI | Charged multivesicular body protein 7 OS=Dictyostelium discoideum GN=chmp7 PE=3 SV=1 | 113 | 424 | 5.0E-09 |
sp|P39929|SNF7_YEAST | Vacuolar-sorting protein SNF7 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SNF7 PE=1 SV=1 | 269 | 397 | 6.0E-07 |
GO Term | Description | Terminal node |
---|---|---|
GO:0007034 | vacuolar transport | Yes |
GO:0051641 | cellular localization | No |
GO:0051179 | localization | No |
GO:0046907 | intracellular transport | No |
GO:0051234 | establishment of localization | No |
GO:0051649 | establishment of localization in cell | No |
GO:0008150 | biological_process | No |
GO:0009987 | cellular process | No |
GO:0006810 | transport | No |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 44 | 0.45 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >AgabiH97|055950 MMAAAPGPSADSLSSHSIFQSTSKARLQALYSDFARQKQSNPNAFHANVEWWRKTLEGLLDSGLLRGTVGDSESR LVLQANRSLLDCVKLDKIGKPLAIGTVINELRSNNTLLLLNEFMSSKVSVYDSGWLPYRIASFVVGRPLWWALEQ VGIVGDEGILTSSSQTKETVWWGDYVSLPLVEKAADAVMSMQAMRMTGPADTLYTFEGFRRSFGPIFGESSHLLN DMDARVLVKYLERERKAVILDDQVVKFFDSSVALEDRVITAVDRGILELKSAILNLQHQIDAVQTKMDDYAKKAA DALRQKRKVLALGFLRSRKQLEDLLGKRLSSLSTLEGTMISIETAAGDVQIMKTFESSTTTLRTILAHSSLQREN INQTMDALAEASQDAKEVDDAIRIGGDVALGVEISDEEIERELEALAKDVENSPDTLQTLEQLRPPSVLVETTDA TDKVPLLSH* |
Coding | >AgabiH97|055950 ATGATGGCAGCGGCACCCGGCCCTTCCGCTGATTCTCTCTCTTCTCACAGTATTTTCCAGAGTACATCTAAGGCT CGACTCCAGGCTTTATATTCTGATTTCGCCCGCCAGAAGCAATCCAATCCAAACGCTTTTCATGCAAATGTGGAG TGGTGGCGGAAGACACTGGAAGGCTTACTTGACTCAGGCCTTTTACGTGGCACCGTTGGGGACTCAGAAAGTAGG CTTGTTCTACAGGCCAATCGCAGTCTTTTGGACTGCGTGAAATTAGACAAGATAGGCAAGCCTCTGGCTATAGGT ACCGTCATCAATGAATTGCGCTCGAATAATACTCTACTACTTTTGAATGAGTTCATGAGCTCCAAAGTTTCGGTG TATGACTCCGGCTGGCTCCCGTACCGCATTGCTTCCTTTGTTGTAGGACGTCCTTTGTGGTGGGCACTGGAGCAA GTTGGGATTGTTGGAGATGAGGGCATTTTGACCTCTAGCTCCCAAACAAAGGAGACAGTCTGGTGGGGAGATTAC GTATCTCTCCCACTCGTCGAGAAAGCGGCCGATGCAGTCATGTCCATGCAGGCAATGAGAATGACAGGCCCAGCA GACACTCTGTACACGTTTGAAGGCTTCAGAAGATCATTTGGTCCTATTTTTGGTGAATCAAGCCATCTGCTGAAC GACATGGACGCTCGAGTTCTCGTCAAGTACCTCGAGAGAGAACGCAAAGCTGTGATTCTCGATGACCAAGTTGTC AAATTCTTCGATAGCTCAGTGGCACTGGAAGATCGTGTCATCACAGCCGTTGATCGTGGTATTCTTGAATTGAAA TCTGCAATACTCAACCTTCAGCATCAAATTGATGCAGTTCAGACAAAGATGGACGACTATGCGAAGAAGGCTGCG GATGCTTTACGACAAAAGCGGAAAGTACTAGCTCTCGGCTTCCTAAGATCACGAAAACAGCTTGAGGACCTTCTA GGCAAGAGACTTTCTTCTTTGAGTACCTTGGAAGGAACCATGATTTCCATTGAGACGGCAGCTGGCGATGTCCAG ATAATGAAAACATTCGAATCCTCGACAACTACACTCCGCACTATTCTCGCACACTCCTCACTTCAGCGTGAAAAC ATCAATCAAACAATGGATGCATTGGCAGAGGCTAGTCAAGATGCCAAGGAGGTCGATGACGCAATAAGAATTGGG GGTGATGTGGCCCTTGGTGTCGAAATATCTGACGAAGAGATTGAAAGAGAGCTAGAAGCTCTGGCGAAAGATGTC GAAAATAGTCCGGATACCCTACAGACTCTGGAGCAGCTCCGGCCACCGTCCGTTCTTGTGGAGACAACTGATGCC ACAGATAAAGTTCCATTACTATCTCATTGA |
Transcript | >AgabiH97|055950 ATGATGGCAGCGGCACCCGGCCCTTCCGCTGATTCTCTCTCTTCTCACAGTATTTTCCAGAGTACATCTAAGGCT CGACTCCAGGCTTTATATTCTGATTTCGCCCGCCAGAAGCAATCCAATCCAAACGCTTTTCATGCAAATGTGGAG TGGTGGCGGAAGACACTGGAAGGCTTACTTGACTCAGGCCTTTTACGTGGCACCGTTGGGGACTCAGAAAGTAGG CTTGTTCTACAGGCCAATCGCAGTCTTTTGGACTGCGTGAAATTAGACAAGATAGGCAAGCCTCTGGCTATAGGT ACCGTCATCAATGAATTGCGCTCGAATAATACTCTACTACTTTTGAATGAGTTCATGAGCTCCAAAGTTTCGGTG TATGACTCCGGCTGGCTCCCGTACCGCATTGCTTCCTTTGTTGTAGGACGTCCTTTGTGGTGGGCACTGGAGCAA GTTGGGATTGTTGGAGATGAGGGCATTTTGACCTCTAGCTCCCAAACAAAGGAGACAGTCTGGTGGGGAGATTAC GTATCTCTCCCACTCGTCGAGAAAGCGGCCGATGCAGTCATGTCCATGCAGGCAATGAGAATGACAGGCCCAGCA GACACTCTGTACACGTTTGAAGGCTTCAGAAGATCATTTGGTCCTATTTTTGGTGAATCAAGCCATCTGCTGAAC GACATGGACGCTCGAGTTCTCGTCAAGTACCTCGAGAGAGAACGCAAAGCTGTGATTCTCGATGACCAAGTTGTC AAATTCTTCGATAGCTCAGTGGCACTGGAAGATCGTGTCATCACAGCCGTTGATCGTGGTATTCTTGAATTGAAA TCTGCAATACTCAACCTTCAGCATCAAATTGATGCAGTTCAGACAAAGATGGACGACTATGCGAAGAAGGCTGCG GATGCTTTACGACAAAAGCGGAAAGTACTAGCTCTCGGCTTCCTAAGATCACGAAAACAGCTTGAGGACCTTCTA GGCAAGAGACTTTCTTCTTTGAGTACCTTGGAAGGAACCATGATTTCCATTGAGACGGCAGCTGGCGATGTCCAG ATAATGAAAACATTCGAATCCTCGACAACTACACTCCGCACTATTCTCGCACACTCCTCACTTCAGCGTGAAAAC ATCAATCAAACAATGGATGCATTGGCAGAGGCTAGTCAAGATGCCAAGGAGGTCGATGACGCAATAAGAATTGGG GGTGATGTGGCCCTTGGTGTCGAAATATCTGACGAAGAGATTGAAAGAGAGCTAGAAGCTCTGGCGAAAGATGTC GAAAATAGTCCGGATACCCTACAGACTCTGGAGCAGCTCCGGCCACCGTCCGTTCTTGTGGAGACAACTGATGCC ACAGATAAAGTTCCATTACTATCTCATTGA |
Gene | >AgabiH97|055950 ATGATGGCAGCGGCACCCGGCCCTTCCGCTGATTCTCTCTCTTCTCACAGTATTTTCCAGAGTACATCTAAGGCT CGACTCCAGGCTTTATATTCTGATTTCGCCCGCCAGAAGCAATCCAATCCAAACGCTTTTCATGCAAATGTGGAG TGGTGGCGGAAGACACTGGAAGGCTTACTTGACTCAGGCCTTTTACGTGGCACCGTTGGGGACTCAGAAAGTAGG CTTGTTCTACAGGCCAATCGCAGTCTTTTGGACTGCGTGAAATTAGACAAGATAGGCAAGCCTCTGGCTATAGGT ACCGTCATCGTGAGTCATTCGAATTCCCCGCAGTGTACGTTGACCTCGGACAAGATTTCATCCTAGCAAGAATGA ATTGCGCTCGAATAATACTCTACTACTTTTGAATGAGTTCATGAGCTCCAAAGTTTCGGTGTATGACTCCGGCTG GCTCCCGTACCGCATTGCTTCCTTTGTTGTAGGACGTCCTTTGTGGTGGGCACTGGAGCAAGTTGGGATTGTTGG AGATGAGGGCATTTTGACCTCTAGCTCCCAAACAAAGGAGACAGTCTGGTGGGGAGATTACGTATCTCTCCCACT CGTCGAGAAAGCGGCCGATGCAGTCATGTCCATGCAGGCAATGAGAATGACAGGCCCAGCAGACACTCTGTACAC GTTTGAAGGCTTCAGAAGATCATTTGGTCCTATTTTTGGTGAATCAAGCCATCTGCTGAACGACATGGACGCTCG AGTTCTCGTCAAGTACCTCGAGAGAGAACGCAAAGCTGTGATTCTCGATGACCAAGTAATTGTGTCACCTTTTCG CCGAAATTATCCAATCTTTACCTATGGAATAGGTTGTCAAATTCTTCGATAGCTCAGTGGCACTGGAAGATCGTG TCATCACAGCCGTTGATCGTGGTATTCTTGAATTGAAATCTGCAATACTCAACCTTCAGCATCAAATTGATGCAG TTCAGACAAAGATGGACGAGTAAGGATTGATTTTTAGGCCGATGTGCGATGCTAACATTGGAGATCTCTAGCTAT GCGAAGAAGGCTGCGGATGCTTTACGACAAAAGCGGAAAGTACTAGCTCTCGGCTTCCTAAGATCACGAAAACAG CTTGAGGACCTTCTAGGCAAGAGACTTTCTTCTTTGAGTACCTTGGAAGGAACCATGATTTCCATTGAGACGGCA GCTGGCGATGTCCAGGCGAGTTCCCTAATGGCGCCCCGTAAATTTTCTAAACTTGGATACTTCCAGATAATGAAA ACATTCGAATCCTCGACAACTACACTCCGCACTATTCTCGCACACTCCTCACTTCAGCGTGAAAACATCAATCAA ACAATGGATGCATTGGCAGAGGCTAGTCAAGATGCCAAGGAGGTCGATGACGCAATAAGAATTGGGGGTGATGTG GCCCTTGGTGTCGAAATATCTGACGAAGAGATTGAAAGAGAGCTAGAAGCTCTGGCGAAAGATGTCGAAAATAGT CCGGATACCCTACAGACTCTGGAGCAGCTCCGGCCACCGTCCGTTCTTGTGGAGACAACTGATGCCACAGATAAA GTTCCATTACTATCTCATTGA |