Fungal Genomics

at Utrecht University

General Properties

Protein ID	AgabiH97\|055350
Gene name
Location	scaffold_3:681655..683110
Strand	-
Gene length (bp)	1455
Transcript length (bp)	1074
Coding sequence length (bp)	1074
Protein length (aa)	358

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF00561	Abhydrolase_1	alpha/beta hydrolase fold	2.7E-12	85	170
PF12146	Hydrolase_4	Serine aminopeptidase, S33	8.5E-12	86	312
PF12697	Abhydrolase_6	Alpha/beta hydrolase family	4.0E-08	103	300

Swissprot hits

Swissprot ID	Swissprot Description	Start	End	E-value
sp\|B7KWT4\|RUTD_METC4	Putative aminoacrylate hydrolase RutD OS=Methylobacterium extorquens (strain CM4 / NCIMB 13688) GN=rutD PE=3 SV=1	103	316	1.0E-09
sp\|B1ZB18\|RUTD_METPB	Putative aminoacrylate hydrolase RutD OS=Methylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001) GN=rutD PE=3 SV=1	103	316	2.0E-09
sp\|C7CM33\|RUTD_METED	Putative aminoacrylate hydrolase RutD OS=Methylobacterium extorquens (strain DSM 5838 / DM4) GN=rutD PE=3 SV=1	103	316	3.0E-09

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 47	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Developmental stages of Agaricus bisporus (strain A15). Published in Pelkmans et al, Applied Microbiology and Biotechnology, 2016

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Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>AgabiH97\|055350 MTSDKTKSRGTKGFSQFIGRWVYEPIQRYLSSGPSARHSSEAVHAEDATVKSSAAQVKYSTLMLADGAKLAYEIL GSQHLGKMTPVVVVCGMAAIRGDNDTVINVLAKTYPVLVYDHRGMGDSSLSPKGDEEISIEMMARDLLFLLAKLG WEEIILCGHSMGGTIAQQLLVLPYHPTAPAILHFKVTHLLLIATRCKVTEGGGLPIKSVPGKPRSLEERKEGAKR VIAATLDPEWIKSNTERFNQLLGKAVNNNLCNRPAEVIAKQAVATRNFDFEKLLDRIPRTIQVLIIHGQLDQVIP INHRDDIVKHIPWARLVEEGTLPGHVPTLQFGHLWYEYFDPQVWHDVVHTFVQRRET*
Coding	>AgabiH97\|055350 ATGACTTCCGACAAAACCAAATCTCGAGGCACCAAAGGCTTTTCTCAATTCATCGGCAGATGGGTGTACGAACCT ATACAGAGATATCTTTCGTCAGGGCCTTCTGCACGACATTCCTCTGAAGCTGTACATGCTGAAGATGCTACTGTA AAATCAAGTGCCGCCCAGGTTAAGTATTCAACCTTGATGCTTGCTGATGGTGCGAAACTCGCGTATGAGATATTG GGATCTCAACATTTGGGCAAGATGACACCGGTCGTGGTGGTGTGCGGTATGGCTGCCATACGAGGCGACAATGAC ACAGTGATCAACGTATTGGCGAAGACCTATCCAGTATTGGTGTATGATCATCGAGGAATGGGAGACTCGTCGCTG AGTCCAAAAGGAGATGAAGAGATTTCGATCGAGATGATGGCGAGGGACCTCCTCTTCTTGCTGGCCAAACTTGGC TGGGAAGAAATTATATTATGTGGTCATTCCATGGGTGGTACCATAGCTCAGCAATTACTAGTTCTCCCTTATCAC CCAACAGCGCCAGCAATTCTACATTTCAAGGTCACGCACCTACTCTTAATAGCCACGCGTTGTAAAGTCACTGAG GGTGGGGGACTGCCTATCAAATCTGTTCCTGGAAAACCACGCTCGCTAGAAGAAAGGAAAGAGGGCGCTAAACGA GTTATAGCTGCTACTCTTGATCCAGAGTGGATTAAATCCAATACTGAACGCTTCAACCAGCTGCTAGGAAAGGCT GTGAACAATAATTTGTGTAATCGACCGGCGGAGGTTATCGCTAAACAGGCTGTAGCGACACGGAATTTCGATTTT GAAAAATTGCTTGACCGCATACCGAGAACGATTCAAGTTCTTATAATACATGGGCAATTGGATCAAGTCATTCCC ATAAATCACAGAGATGATATTGTAAAACATATTCCTTGGGCAAGATTGGTTGAGGAAGGTACTTTACCTGGTCAT GTCCCGACACTTCAATTCGGTCACCTCTGGTATGAATATTTCGATCCTCAAGTCTGGCATGATGTTGTGCATACG TTTGTACAACGTCGAGAGACCTAG
Transcript	>AgabiH97\|055350 ATGACTTCCGACAAAACCAAATCTCGAGGCACCAAAGGCTTTTCTCAATTCATCGGCAGATGGGTGTACGAACCT ATACAGAGATATCTTTCGTCAGGGCCTTCTGCACGACATTCCTCTGAAGCTGTACATGCTGAAGATGCTACTGTA AAATCAAGTGCCGCCCAGGTTAAGTATTCAACCTTGATGCTTGCTGATGGTGCGAAACTCGCGTATGAGATATTG GGATCTCAACATTTGGGCAAGATGACACCGGTCGTGGTGGTGTGCGGTATGGCTGCCATACGAGGCGACAATGAC ACAGTGATCAACGTATTGGCGAAGACCTATCCAGTATTGGTGTATGATCATCGAGGAATGGGAGACTCGTCGCTG AGTCCAAAAGGAGATGAAGAGATTTCGATCGAGATGATGGCGAGGGACCTCCTCTTCTTGCTGGCCAAACTTGGC TGGGAAGAAATTATATTATGTGGTCATTCCATGGGTGGTACCATAGCTCAGCAATTACTAGTTCTCCCTTATCAC CCAACAGCGCCAGCAATTCTACATTTCAAGGTCACGCACCTACTCTTAATAGCCACGCGTTGTAAAGTCACTGAG GGTGGGGGACTGCCTATCAAATCTGTTCCTGGAAAACCACGCTCGCTAGAAGAAAGGAAAGAGGGCGCTAAACGA GTTATAGCTGCTACTCTTGATCCAGAGTGGATTAAATCCAATACTGAACGCTTCAACCAGCTGCTAGGAAAGGCT GTGAACAATAATTTGTGTAATCGACCGGCGGAGGTTATCGCTAAACAGGCTGTAGCGACACGGAATTTCGATTTT GAAAAATTGCTTGACCGCATACCGAGAACGATTCAAGTTCTTATAATACATGGGCAATTGGATCAAGTCATTCCC ATAAATCACAGAGATGATATTGTAAAACATATTCCTTGGGCAAGATTGGTTGAGGAAGGTACTTTACCTGGTCAT GTCCCGACACTTCAATTCGGTCACCTCTGGTATGAATATTTCGATCCTCAAGTCTGGCATGATGTTGTGCATACG TTTGTACAACGTCGAGAGACCTAG
Gene	>AgabiH97\|055350 ATGACTTCCGACAAAACCAAATCTCGAGGCACCAAAGGCTTTTCTCAATTCATCGGCAGATGGGTGTACGAACCT ATACAGAGATATCTTTCGTCAGGGCCTTCTGCACGACATTCCTCTGAAGCTGTACATGCTGAAGATGCTACTGTA AAATCAAGTGCCGCCCAGGTTAAGTATTCAACCTTGATGCTTGCTGATGGTGCGAAACTCGCGTATGAGATATTG GGATCTCAACATTTGGGCAAGATGACACCGGTCGTGGTGGTGTGCGGTATGGCTGCCATACGAGGCGACAATGAC ACAGTGATCAACGTATTGGCGAAGACCTATCCAGGTATATTCGAAATTATAATGTTAAGAATTGTGGCTAATTAC TTTTCCAGTATTGGTGTATGATCATCGGTGAGCTTGCACTCGTTGGTAGACTCGATATATCATTGATTACCGACC GGCAGAGGAATGGGAGACTCGTCGCTGAGTCCAAAAGGAGATGAAGAGATTTCGATCGAGATGATGGCGAGGGAC CTCCTCTTCTTGCTGGCCAAACTTGGCTGGGAAGAAATTATATTATGTGGTCATTCCATGGGTGGTAAGGAAATA CTCAATTGCTATTCGAACATTGAGTTAAAACTTTCACTAGGTACCATAGCTCAGCAATTACTAGTTCTCCCTTAT CACCCAACAGCGCCAGCAATTCTACATTTCAAGGTCACGCACCTACTCTTAATAGCCACGCGTTGTAAAGTCACT GAGGGTGGGGGACTGCCTATCAAATCTGTTCCTGGAAAACCACGCTCGCTAGAAGAAAGGAAAGAGGGCGCTAAA CGAGTTATAGCTGCTACTCTTGATCCAGAGTGGATTAAATCCAATACTGAACGCTTCAACCAGCTGCTAGGAAAG GCTGTGAACAATAATTTGTGGTTTGTATACATATTTCACTGATCTGATGGTTTTGCTGACTTTACCCTCTTGGAT AGTAATCGACCGGCGGAGGTTATCGGTGAGGACACTTCTTTTGTACTACTTTGGGTTCTAGCTGAAACGGTGGAT AGCTAAACAGGCTGTAGCGGTATGTTCTCCAGCATTCCTTTTCGCCTTCTATTTCCTCATTTTCTATGGAATCTA GACACGGAATTTCGATTTTGAAAAATTGCTTGACCGCATACCGAGAACGATTCAAGTTCTTATAATACATGGGCA ATTGGATCAAGTCATTCCCATAAATCACAGAGATGTAAGTTTTTATCGTTTGAGCTGTGGTGAAAATTGTTGATG ATAGTTGGCGCGGCATCTCAGGATATTGTAAAACATATTCCTTGGGCAAGATTGGTTGAGGAAGGTACTTTACCT GGTCATGTCCCGACACTTCAATTCGGTCACCTCTGGTATGAATATTTCGATCCTCAAGTCTGGCATGATGTTGTG CATACGTTTGTACAACGTCGAGAGACCTAG

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