Fungal Genomics

General Properties

Protein ID	AgabiH97|055140
Gene name
Location	scaffold_3:626330..629242
Strand	-
Gene length (bp)	2912
Transcript length (bp)	2262
Coding sequence length (bp)	2262
Protein length (aa)	754

Overview

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PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF12891	Glyco_hydro_44	Glycoside hydrolase family 44	4.6E-67	319	534

Swissprot hits

Swissprot ID	Swissprot Description	Start	End	E-value
sp|P22533|MANB_CALSA	Beta-mannanase/endoglucanase A OS=Caldicellulosiruptor saccharolyticus GN=manA PE=1 SV=2	275	714	4.0E-38
sp|P29719|GUNA_PAELA	Endoglucanase A OS=Paenibacillus lautus GN=celA PE=3 SV=1	272	707	7.0E-38

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]

Localizations	Signals	Cytoplasm	Nucleus	Extracellular	Cell membrane	Mitochondrion	Plastid	Endoplasmic reticulum	Lysosome vacuole	Golgi apparatus	Peroxisome
Extracellular	Signal peptide	0.2137	0.1854	0.8858	0.1994	0.0529	0.0228	0.1629	0.2257	0.1674	0.0041

SignalP

SignalP signal predicted	Location	Score
Yes	1 - 24	0.99979

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

CAZyme category	E-value	Start	End
GH44	6.3E-102	275	710

Secondary Metabolism

(None)

Expression data

Analysis 1: Developmental stages of Agaricus bisporus (strain A15). Published in Pelkmans et al, Applied Microbiology and Biotechnology, 2016

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Orthologs

Orthofinder run ID	1
Orthogroup	8434
Change Orthofinder run	1: Agaricomycetes 5: Agaricus - all strains

Species	Protein ID
Agaricus bisporus var bisporus H39	AgabiH39|055140
Agaricus bisporus var bisporus H97	AgabiH97|055140 (this protein)

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus Download genbank file of locus (reverse complement) The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>AgabiH97|055140 MHIGSCFVKLLAFVLAAAISKVAADDLSIYTDNNVNNGWENWSWSSTIDFAATDLIAGSSGSSISVTSEQFAALS LHYNAAPIKGFEGLQFDIAGDQPDISISIESVADGVISPSMALSSISKSITSDSFTTVLINFNDLPGNGGTLADQ NWDRISFQAGNNGATYHVDNMLFVESIVIAPEFLSAEPLGSNVVAVTTKGDVDFSTVRVKLNGNTVRITGKTSYS PVDTPAQSITYLTLASSLRPGKLVITADGGKSFDYTLSNALSGSINKSIKSPINPHIYGVNFPVSADYIQHLGIT ISRWGGNAVTAYNPFDGFTNAGADWYFENRGSTDGTAEDWLAWVQGAGSDALLTVPALDWVSKDSTSYSYPVSIY GDQADTDPFNSDAGNGLFPNGTAVAPPDPTTVYTGWNTSLAQTWLKGLANKPLMVAIDNEIEIASSTHRDMHPDP MSYDEELDRVVRFATTAKEAIPDILVVAPSTCCWWFYWTTTVGWDDTTAHNNTDFLPWFLGQMKAVEATTGKRLL DYLDIHYYFAADTSANDDAAKAKRLRMTRSWWDESYVDESWVGQDPIQNHQPEADRVELIPRFKSLIDSIYPGTK LSISEWNSQADNDITGGLVTAESLGIFGRYGIDAATYWATPGEKAPAGLAYWLYRGYGTYFGDQTAQVKLYNPDP DTWSIFAGSDNNKLTLVIINKKPDQALSFNLSNVPTGSYFMRHFGGAAGVAKWQTTITLTTNKFIVVPSYTAVFL KQQ*
Coding	>AgabiH97|055140 ATGCATATCGGAAGCTGCTTCGTCAAGCTACTTGCCTTCGTCTTGGCCGCGGCCATCTCAAAAGTAGCTGCTGAC GACTTGAGCATTTACACAGACAACAACGTCAATAATGGATGGGAAAATTGGAGTTGGAGCAGTACAATTGACTTT GCAGCAACCGATCTCATTGCTGGATCTTCTGGAAGTAGTATTTCAGTCACCTCCGAACAGTTTGCTGCTCTCTCG CTTCACTACAATGCCGCACCCATCAAAGGGTTTGAGGGTCTACAATTCGACATTGCCGGAGACCAACCTGATATT TCCATCTCGATCGAATCTGTTGCAGATGGTGTCATTTCTCCTTCTATGGCGTTGTCAAGTATCAGCAAGTCTATC ACCTCCGACAGCTTTACCACCGTTCTGATTAATTTCAATGACTTGCCTGGTAATGGAGGCACCCTTGCCGACCAA AATTGGGACCGTATCAGTTTCCAAGCTGGTAACAATGGTGCAACATATCATGTGGACAATATGCTTTTTGTTGAA AGCATTGTTATCGCACCCGAATTTCTGAGTGCCGAACCTCTCGGAAGTAATGTGGTCGCAGTTACCACCAAAGGC GATGTCGACTTTTCCACTGTGCGGGTGAAATTGAATGGCAACACTGTCAGAATCACTGGAAAGACGTCATATTCA CCAGTCGACACCCCTGCCCAATCCATTACCTACTTGACCCTCGCATCTAGCCTTAGGCCTGGTAAACTCGTTATC ACTGCCGACGGTGGCAAATCTTTCGACTACACTCTGTCCAACGCCCTATCTGGCAGCATTAACAAGAGCATCAAG TCGCCCATCAATCCTCATATTTATGGTGTCAACTTCCCCGTTAGTGCTGATTATATTCAGCATCTTGGTATCACA ATTTCGCGTTGGGGTGGTAACGCTGTTACTGCTTATAACCCTTTTGACGGTTTCACCAACGCTGGGGCCGATTGG TACTTTGAGAATAGAGGCTCTACCGATGGTACGGCAGAAGACTGGTTGGCTTGGGTCCAGGGTGCCGGTTCAGAT GCGCTCTTGACAGTACCTGCTCTAGATTGGGTCTCTAAAGACAGTACATCGTACTCATATCCAGTATCTATCTAT GGAGACCAGGCGGACACCGACCCATTCAATTCGGACGCAGGGAACGGTCTTTTCCCCAACGGTACCGCAGTAGCT CCACCCGATCCTACCACTGTTTATACAGGCTGGAACACTAGCCTTGCCCAAACGTGGCTCAAAGGCCTTGCCAAT AAACCCCTTATGGTCGCAATCGATAACGAAATCGAAATCGCAAGTAGCACTCACCGGGATATGCATCCCGATCCA ATGAGCTACGACGAAGAATTAGACCGCGTTGTGCGATTTGCTACTACGGCAAAGGAAGCCATTCCGGATATTTTG GTTGTCGCGCCTTCTACCTGCTGTTGGTGGTTCTACTGGACCACCACTGTCGGTTGGGATGATACGACGGCACAT AATAACACTGATTTCTTACCTTGGTTCTTGGGTCAAATGAAGGCGGTCGAGGCGACCACTGGAAAGCGACTTCTT GATTATCTCGACATTCATTATTACTTCGCGGCTGATACCAGTGCAAATGACGATGCTGCTAAAGCTAAGAGGTTG AGAATGACCCGTAGCTGGTGGGACGAATCCTACGTCGATGAGTCCTGGGTCGGCCAAGACCCTATCCAGAACCAT CAACCCGAAGCTGACCGTGTTGAACTCATCCCTCGTTTCAAGTCATTAATAGATTCTATCTATCCTGGAACCAAA CTTTCCATCTCTGAATGGAATTCTCAAGCAGACAATGACATCACTGGCGGCCTTGTAACAGCGGAGTCTCTCGGT ATCTTTGGTCGATATGGCATTGATGCCGCTACATACTGGGCAACTCCTGGAGAAAAAGCTCCTGCTGGTTTGGCT TACTGGCTTTATCGAGGATATGGTACCTACTTCGGAGACCAGACCGCTCAGGTCAAACTTTATAATCCTGACCCT GATACTTGGAGTATCTTTGCTGGAAGCGACAACAACAAGCTTACTCTTGTCATCATTAACAAGAAACCTGATCAG GCTCTTTCCTTTAATCTTTCCAATGTCCCGACCGGTTCTTACTTTATGAGACACTTTGGTGGTGCTGCCGGCGTT GCTAAGTGGCAGACTACGATTACTTTGACCACAAACAAGTTTATTGTTGTCCCTAGCTATACTGCTGTCTTCTTG AAGCAACAGTAG
Transcript	>AgabiH97|055140 ATGCATATCGGAAGCTGCTTCGTCAAGCTACTTGCCTTCGTCTTGGCCGCGGCCATCTCAAAAGTAGCTGCTGAC GACTTGAGCATTTACACAGACAACAACGTCAATAATGGATGGGAAAATTGGAGTTGGAGCAGTACAATTGACTTT GCAGCAACCGATCTCATTGCTGGATCTTCTGGAAGTAGTATTTCAGTCACCTCCGAACAGTTTGCTGCTCTCTCG CTTCACTACAATGCCGCACCCATCAAAGGGTTTGAGGGTCTACAATTCGACATTGCCGGAGACCAACCTGATATT TCCATCTCGATCGAATCTGTTGCAGATGGTGTCATTTCTCCTTCTATGGCGTTGTCAAGTATCAGCAAGTCTATC ACCTCCGACAGCTTTACCACCGTTCTGATTAATTTCAATGACTTGCCTGGTAATGGAGGCACCCTTGCCGACCAA AATTGGGACCGTATCAGTTTCCAAGCTGGTAACAATGGTGCAACATATCATGTGGACAATATGCTTTTTGTTGAA AGCATTGTTATCGCACCCGAATTTCTGAGTGCCGAACCTCTCGGAAGTAATGTGGTCGCAGTTACCACCAAAGGC GATGTCGACTTTTCCACTGTGCGGGTGAAATTGAATGGCAACACTGTCAGAATCACTGGAAAGACGTCATATTCA CCAGTCGACACCCCTGCCCAATCCATTACCTACTTGACCCTCGCATCTAGCCTTAGGCCTGGTAAACTCGTTATC ACTGCCGACGGTGGCAAATCTTTCGACTACACTCTGTCCAACGCCCTATCTGGCAGCATTAACAAGAGCATCAAG TCGCCCATCAATCCTCATATTTATGGTGTCAACTTCCCCGTTAGTGCTGATTATATTCAGCATCTTGGTATCACA ATTTCGCGTTGGGGTGGTAACGCTGTTACTGCTTATAACCCTTTTGACGGTTTCACCAACGCTGGGGCCGATTGG TACTTTGAGAATAGAGGCTCTACCGATGGTACGGCAGAAGACTGGTTGGCTTGGGTCCAGGGTGCCGGTTCAGAT GCGCTCTTGACAGTACCTGCTCTAGATTGGGTCTCTAAAGACAGTACATCGTACTCATATCCAGTATCTATCTAT GGAGACCAGGCGGACACCGACCCATTCAATTCGGACGCAGGGAACGGTCTTTTCCCCAACGGTACCGCAGTAGCT CCACCCGATCCTACCACTGTTTATACAGGCTGGAACACTAGCCTTGCCCAAACGTGGCTCAAAGGCCTTGCCAAT AAACCCCTTATGGTCGCAATCGATAACGAAATCGAAATCGCAAGTAGCACTCACCGGGATATGCATCCCGATCCA ATGAGCTACGACGAAGAATTAGACCGCGTTGTGCGATTTGCTACTACGGCAAAGGAAGCCATTCCGGATATTTTG GTTGTCGCGCCTTCTACCTGCTGTTGGTGGTTCTACTGGACCACCACTGTCGGTTGGGATGATACGACGGCACAT AATAACACTGATTTCTTACCTTGGTTCTTGGGTCAAATGAAGGCGGTCGAGGCGACCACTGGAAAGCGACTTCTT GATTATCTCGACATTCATTATTACTTCGCGGCTGATACCAGTGCAAATGACGATGCTGCTAAAGCTAAGAGGTTG AGAATGACCCGTAGCTGGTGGGACGAATCCTACGTCGATGAGTCCTGGGTCGGCCAAGACCCTATCCAGAACCAT CAACCCGAAGCTGACCGTGTTGAACTCATCCCTCGTTTCAAGTCATTAATAGATTCTATCTATCCTGGAACCAAA CTTTCCATCTCTGAATGGAATTCTCAAGCAGACAATGACATCACTGGCGGCCTTGTAACAGCGGAGTCTCTCGGT ATCTTTGGTCGATATGGCATTGATGCCGCTACATACTGGGCAACTCCTGGAGAAAAAGCTCCTGCTGGTTTGGCT TACTGGCTTTATCGAGGATATGGTACCTACTTCGGAGACCAGACCGCTCAGGTCAAACTTTATAATCCTGACCCT GATACTTGGAGTATCTTTGCTGGAAGCGACAACAACAAGCTTACTCTTGTCATCATTAACAAGAAACCTGATCAG GCTCTTTCCTTTAATCTTTCCAATGTCCCGACCGGTTCTTACTTTATGAGACACTTTGGTGGTGCTGCCGGCGTT GCTAAGTGGCAGACTACGATTACTTTGACCACAAACAAGTTTATTGTTGTCCCTAGCTATACTGCTGTCTTCTTG AAGCAACAGTAG
Gene	>AgabiH97|055140 ATGCATATCGGAAGCTGCTTCGTCAAGCTACTTGCCTTCGTCTTGGCCGCGGCCATCTCAAAAGTAGCTGCTGAC GACTTGAGCATTTACACAGACAACAACGTCAATAATGGATGGGAAAATTGGAGTTGGAGCAGTACAATTGACTTT GCAGCAACCGATCTCATTGCTGGATCTTCTGGAAGTAGTATTTCAGTCACCTCCGAACAGTTTGCTGCTCTCTCG CTTCACTACAATGCCGCACCCATCAAAGGGTTTGAGGGTCTACAATTCGACATTGCCGTAAGTTTTGAAGTGTGT TTTGAAGTACGATTATTGCTGAACTTTTGTGTTACTCAGGGAGACCAACCTGATATTTCCATCTCGATCGAATCT GTTGCAGATGGTGTCATTTCTCCTTCTATGGCGTTGTCAAGTATCAGCAAGTCTATCACCTCCGACAGCTTTACC ACCGTTCTGATTAATTTCAATGACTTGCCTGGTAATGGAGGCACCCTTGTGAGCCAAGATGCCTTTAGCTTGGAG AACACTAGCTAATTTCATATGGAAATAAGGCCGACCAAAATTGGGACCGTATCAGTTTCCAAGCTGGTAACAATG GTGCAACAGTTAGTTTCTGCAACAATACTACTGGAATAAAAGTACTAACCAGTCAATTCGCCAGTATCATGTGGA CAATATGCTTTTTGTTGAAAGCATTGTTATCGCACCCGAATTTCTGAGTGCCGAACCTCTCGGAAGTAATGTGGT CGCAGTTACCACCAAAGGCGATGTCGACTTTTCCACTGTGCGGGTGAAATTGAATGGCAACGTAAGCTATTCAGT TGGCATTTTAATGCTTGCTTTACCCATTTGCAATGCAAGACTGTCAGAATCACTGGAAAGACGTCATATTCACCA GTCGACACCCCTGCCCAATCCATTACCTACTTGACCCTCGCATCTAGCCTTAGGCCTGGTAAACTCGTTATCACT GCCGACGGTGGCAAATCTTTCGACTACACTCTGTCCAACGCCCTATCTGGCAGGTGTGTTCCCGTCCACCTGCTT ACGAGCAACACTGATGGGGAACATTTAGCATTAACAAGAGCATCAAGTCGCCCATCAATCCTCATATTTATGGTG TCAACTTCCCCGTTAGTGCTGATTATATTCAGCATCTTGGTATCACAATTTCGCGTTGGGGTGGTAACGCTGTTA CTGCTTATAACCCTTTTGACGGTTTCACCAACGCTGGGGCCGATTGGTACTTTGAGAATAGAGGCTCTACCGATG GTACGGCAGAAGACTGGTTGGCTTGGGTCCAGGGTGCCGGTTCAGATGCGCTCTTGACAGTACCTGCGTATGTAT TGATTTCGGACCCGCCGATTTCAGTTTTCGATTAATTCTTCTTAAAGTCTAGATTGGGTCTCTAAAGACAGTACA TCGTACTCATATCCAGTATCTATCTATGGAGGTAACCCATATACGCCTTGTCTCTCTTGCACTCAAACTAATGTC CCATAGACCAGGCGGACACCGACCCATTCAATTCGGACGCAGGGAACGGTCTTTTCCCCAACGGTACCGCAGTAG CTCCACCCGATCCTACCACTGTTTATACAGGCTGGAACACTAGCCTTGCCCAAACGTGGCTCAAAGGCCTTGCCA ATAAACCCCTTATGGTCGCAATCGATAACGAAATCGAAATCGCAAGTAGCACTCACCGGGATATGCATCCCGAGT ACGTTATTCCAATTTCGTTGATATTTTTCGGTTTGTTCTTATGATCCATTAGTCCAATGAGCTACGACGAAGAAT TAGACCGCGTTGTGCGATTTGCTACTACGGCAAAGGAAGCCATTCCGGATATTTTGGTTGTCGCGCCTTCTACCT GCTGTTGGTGGTTCTGTGAGTAGGGCATCTATTCCTATATCAGATTGATTGAATTGTCCTGCGCAGACTGGACCA CCACTGTCGGTTGGGATGATACGACGGCACATAATAACACTGATTTCTTACCTTGGTTCTTGGGTCAAATGAAGG CGGTCGAGGCGACCACTGGAAAGCGACTTCTTGATTATCTCGACATTCATTATTACTTCGCGGCTGATACCAGTG CAAATGACGATGCTGCTAAAGCTAAGAGGTTGAGAATGACCCGTAGCTGGTGGGTAAGTCGAACGTAACTCCCCG TGTGGTCGAAAGATGTAATATTCATAAATTATTTAGGACGAATCCTACGTCGATGAGTCCTGGGTCGGCCAAGAC CCTATCCAGAACCATCAACCCGAAGCTGACCGTGTTGAACTCATCCCTCGTTTCAAGTCATTAATAGATTCTATC TATCCTGGAACCAAACTTTCCATCTCTGAATGGAATTCTCAAGCAGACAATGACATCACTGGCGGCCTTGTAACA GCGGAGTCTCTCGGTATCTTTGGTCGATATGGCATTGATGCCGCTACATACTGGGCAACTCCTGGAGAAAAAGCT CCTGCTGGTTTGGCTTACTGGCTTTATCGAGGGTATGATATTCGATCTTTTGGTTCAATGCTATTCTAAGCGATT TCCGGCCGTCAGATATGGTACCTACTTCGGAGACCAGACCGCTCAGGTCAAACTTTATAATCCTGACCCTGATAC TTGGAGTATCTTTGCTGGAAGCGACAACAACAAGCTTACTCTTGTCATCATTAACAAGAAACCTGATCAGGCTCT TTCCTTTAATCTTTCCAATGTCCCGACCGGTTCTTACTTTATGAGACACTTTGGTGGTGCTGCCGGCGTTGCTAA GTGGCAGGTATGTGATGTGTGGCTCGTATATTTTGTATCCTCTGCTGACCTTTGATTTGTAGACTACGATTACTT TGACCACAAACAAGTTTATTGTTGTCCCTAGCTATACTGCTGTCTTCTTGAAGCAACAGTAG