Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabiH97|054540
Gene name
Locationscaffold_3:499944..500714
Strand+
Gene length (bp)770
Transcript length (bp)654
Coding sequence length (bp)654
Protein length (aa) 218

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PFAM Domains

(None)

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|P0DN32|CUPR1_ARTBC Probable GPI-anchored cupredoxin ARB_05732-1 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_05732-1 PE=1 SV=1 5 132 5.0E-08

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 18 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Developmental stages of Agaricus bisporus (strain A15). Published in Pelkmans et al, Applied Microbiology and Biotechnology, 2016

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >AgabiH97|054540
MIFVIEFVLALAVFASAANINVIVGADDSSVFEPPSVRAQKGDVLQFEFFSSNLSVSQSTFESPCTIAPGGVDSG
LLVPLDPNTHPIWSFTIVDDSVPLFFFCAQIAPEHHCQTGMVFVINDNPQQSFNAFQDAAKKSSIDIVADNQAAA
PVPGATMARLQGEPGSPVSVGPVSAIAIAAPTATSKEPNCAVAFWDLNTAGAVSIVTLVLAVAGSVL*
Coding >AgabiH97|054540
ATGATCTTCGTGATTGAATTCGTTCTCGCCCTGGCGGTTTTTGCCTCTGCAGCCAATATCAACGTCATAGTGGGT
GCTGACGATTCATCGGTGTTCGAGCCACCTTCTGTCAGAGCTCAGAAGGGTGACGTTCTTCAATTCGAATTTTTC
TCGAGTAACCTCTCTGTCTCTCAATCAACGTTCGAGAGCCCATGCACCATAGCGCCCGGGGGCGTTGACTCCGGT
CTTCTTGTTCCTCTTGATCCAAACACCCACCCGATATGGAGCTTCACCATAGTTGATGATAGCGTCCCATTGTTC
TTCTTTTGCGCGCAAATTGCTCCTGAACATCATTGCCAAACAGGCATGGTCTTTGTCATAAATGATAACCCACAA
CAATCTTTCAATGCCTTCCAGGATGCCGCTAAGAAAAGTTCGATTGATATTGTTGCCGATAATCAAGCTGCTGCT
CCCGTCCCTGGTGCCACTATGGCGAGATTGCAGGGAGAACCAGGCTCTCCTGTTTCCGTTGGACCTGTTAGTGCT
ATAGCAATAGCTGCACCAACTGCTACCAGCAAAGAGCCTAACTGTGCTGTTGCTTTTTGGGATTTGAATACAGCT
GGTGCTGTGAGCATTGTCACCTTGGTTTTGGCTGTCGCTGGGTCCGTGCTTTAG
Transcript >AgabiH97|054540
ATGATCTTCGTGATTGAATTCGTTCTCGCCCTGGCGGTTTTTGCCTCTGCAGCCAATATCAACGTCATAGTGGGT
GCTGACGATTCATCGGTGTTCGAGCCACCTTCTGTCAGAGCTCAGAAGGGTGACGTTCTTCAATTCGAATTTTTC
TCGAGTAACCTCTCTGTCTCTCAATCAACGTTCGAGAGCCCATGCACCATAGCGCCCGGGGGCGTTGACTCCGGT
CTTCTTGTTCCTCTTGATCCAAACACCCACCCGATATGGAGCTTCACCATAGTTGATGATAGCGTCCCATTGTTC
TTCTTTTGCGCGCAAATTGCTCCTGAACATCATTGCCAAACAGGCATGGTCTTTGTCATAAATGATAACCCACAA
CAATCTTTCAATGCCTTCCAGGATGCCGCTAAGAAAAGTTCGATTGATATTGTTGCCGATAATCAAGCTGCTGCT
CCCGTCCCTGGTGCCACTATGGCGAGATTGCAGGGAGAACCAGGCTCTCCTGTTTCCGTTGGACCTGTTAGTGCT
ATAGCAATAGCTGCACCAACTGCTACCAGCAAAGAGCCTAACTGTGCTGTTGCTTTTTGGGATTTGAATACAGCT
GGTGCTGTGAGCATTGTCACCTTGGTTTTGGCTGTCGCTGGGTCCGTGCTTTAG
Gene >AgabiH97|054540
ATGATCTTCGTGATTGAATTCGTTCTCGCCCTGGCGGTTTTTGCCTCTGCAGCCAATATCAACGTCATAGTGGGT
GCTGACGATTCATCGGTGTTCGAGCCACCTTCTGTCAGAGCTCAGAAGGGTGACGTTCTTCAATTCGAATTGTAA
TGTATCTTCCTCTTGAGGTTAATCGCTTCATGCACTAAAATATCATGCGTGTAGTTTCTCGAGTAACCTCTCTGT
CTCTCAATCAACGTTCGAGAGCCCATGCACCATAGCGCCCGGGGGCGTTGACTCCGGTCTTCTTGTTCCTCTTGA
TCCAAACACCCACCCGATATGGAGCTTCACCATAGTTGATGATAGCGTCCCATTGTTCTTCTTTTGCGCGCAAAT
TGCTCCTGAACATCATTGCCAAACAGGCATGGTCTTTGTCATAAATGATAACCCACAACAATCTTTCAATGCCTT
CCAGGTAATCTGATTTTCTAAACTCAAATGAAATGTCCGTTGATGATTTTTTTCTCTTAAAGGATGCCGCTAAGA
AAAGTTCGATTGATATTGTTGCCGATAATCAAGCTGCTGCTCCCGTCCCTGGTGCCACTATGGCGAGATTGCAGG
GAGAACCAGGCTCTCCTGTTTCCGTTGGACCTGTTAGTGCTATAGCAATAGCTGCACCAACTGCTACCAGCAAAG
AGCCTAACTGTGCTGTTGCTTTTTGGGATTTGAATACAGCTGGTGCTGTGAGCATTGTCACCTTGGTTTTGGCTG
TCGCTGGGTCCGTGCTTTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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