Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabiH97|054500
Gene name
Locationscaffold_3:489620..491893
Strand-
Gene length (bp)2273
Transcript length (bp)2223
Coding sequence length (bp)2223
Protein length (aa) 741

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF07250 Glyoxal_oxid_N Glyoxal oxidase N-terminus 2.9E-35 252 471
PF09118 GO-like_E_set Galactose oxidase-like, Early set domain 1.1E-21 635 731

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|D4AUF1|WSCD1_ARTBC WSC domain-containing protein ARB_07867 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_07867 PE=1 SV=1 249 732 3.0E-48

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 24 0.45

Transmembrane Domains

Domain # Start End Length
1 7 24 17

Transcription Factor Class

(None)

Expression data

Analysis 1: Developmental stages of Agaricus bisporus (strain A15). Published in Pelkmans et al, Applied Microbiology and Biotechnology, 2016

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >AgabiH97|054500
MARLYTLFLSFFLLFLVVLSVYAQRDKWNRLAPFKHTQIRQGASYYPGKRYKTFSSDSPLIKYEGTWSVARSRQY
DSGVLHITHQRGAALSFNFSGTGIVWLGNCDRFHGYAQVILDDEAIGTVDLSCDVTSPLNRRKLFETSGLDNRPH
TIKFINLGSRLRHYGVGVMDIDTLVVVPGKILDFSLVDGHLASSIQRLDRLNLRQNQGPGWKLTRRGTSGVAAMQ
LAIVSPTLAIIIDKVERNPLTVDGHPAWAALYNLDTQALTPLRPASNSFCAGGAFLSNGTLVNAGGNAVVQPDFG
DVDGSQGIRLFHPCNSADGEGCEIYEDPKSNKLASPRWYTTVLKIQDGSIMILGGSRTGGFINDQKKNNPTLEYF
PRKSIHGSGGSPIHLKFLEDTLNSNLFPIAFLLPTGNIFIAANNDAMIYDWQRNTEERLPSIPNGVRVTYPMSGV
GLLLPLSYEDDYKPEILLCGGSTLDDRRDPKDYSSQEPASKQCSRMVVTEQGIARGWQVEEMPEARIMPDGILLP
TGQVLILNGAQTGVGGYGNAKDQIGQSNADNPAFTPVMYDPQAPVGRRFYRDSSMPTSSIARLYHSSAILTSKGN
ILIMGSNPNLDRSNDKYATEYRVEVLDPPYMFQERPVIRASPLIVDFNERFEILLGGKSGKEVKVAIMDFGYATH
GVHANSRLVWLRHEIVDNGTKLSIAAPPNNRIYPPGPGWLFVVVDGIPSEGAQIMIGDGKDPAAN*
Coding >AgabiH97|054500
ATGGCGCGTTTGTACACTCTCTTCCTCTCGTTCTTTCTTCTTTTTCTCGTCGTTTTAAGCGTCTACGCGCAAAGA
GACAAATGGAATAGGCTTGCGCCTTTTAAACACACCCAAATACGACAGGGCGCTTCGTATTACCCAGGAAAAAGA
TACAAAACTTTCTCCTCTGATTCTCCCTTGATCAAGTACGAAGGAACATGGTCTGTCGCACGATCGAGACAATAT
GACTCGGGCGTTCTTCATATCACTCATCAACGCGGCGCGGCTCTGTCCTTCAACTTCTCTGGCACTGGTATCGTT
TGGCTCGGCAATTGCGATAGGTTTCATGGATACGCTCAAGTAATTCTGGACGACGAGGCGATTGGGACCGTCGAC
CTATCTTGTGATGTGACTTCTCCTTTGAACCGACGGAAGCTTTTCGAGACTTCTGGCCTTGATAACCGACCGCAT
ACAATCAAATTTATCAATCTTGGTTCTCGCCTACGGCATTATGGTGTGGGCGTCATGGACATTGACACTCTTGTC
GTTGTTCCCGGAAAGATTCTGGATTTTTCTCTAGTTGACGGTCACCTCGCGTCATCTATTCAACGTTTGGATCGC
TTAAACCTTCGGCAGAACCAAGGCCCTGGTTGGAAGTTGACGCGACGCGGAACGAGTGGTGTCGCTGCCATGCAA
CTTGCAATTGTCTCTCCAACTCTCGCGATCATAATCGATAAAGTGGAACGCAATCCTTTGACTGTTGACGGGCAT
CCTGCTTGGGCGGCGTTGTACAATTTGGATACGCAGGCTCTTACACCTCTACGACCGGCTTCAAACTCTTTCTGT
GCTGGTGGTGCTTTCTTGTCTAATGGAACTTTGGTCAATGCAGGAGGGAACGCGGTCGTGCAACCGGATTTCGGC
GATGTCGATGGCTCGCAGGGTATCCGTTTATTTCATCCTTGTAACTCTGCGGATGGAGAAGGTTGTGAAATCTAT
GAGGATCCCAAATCGAATAAACTTGCTAGTCCAAGATGGTACACAACAGTGCTCAAAATTCAAGACGGAAGTATC
ATGATTTTAGGTGGCTCTCGCACAGGTGGTTTCATCAACGATCAGAAAAAGAACAATCCCACTCTGGAGTACTTT
CCTCGCAAGTCAATTCATGGTTCCGGTGGTTCACCCATCCATCTGAAATTCCTCGAAGATACTCTTAACTCGAAT
CTCTTCCCAATCGCCTTCTTGTTACCGACTGGGAACATCTTTATTGCTGCAAACAACGATGCTATGATCTACGAT
TGGCAGAGGAATACTGAAGAGAGATTGCCCTCGATTCCAAACGGCGTTCGCGTGACATATCCTATGAGTGGTGTT
GGGCTATTACTACCACTATCCTATGAGGACGACTATAAACCGGAGATTTTGCTTTGTGGTGGTTCGACTCTAGAC
GACAGAAGGGATCCTAAGGATTACTCCTCCCAAGAACCCGCTTCGAAGCAATGCTCCAGAATGGTTGTGACGGAG
CAAGGCATAGCTCGTGGGTGGCAAGTGGAGGAGATGCCGGAAGCACGAATCATGCCCGATGGTATCCTGCTCCCC
ACCGGTCAAGTTCTTATTCTGAATGGCGCTCAGACTGGCGTTGGAGGCTATGGCAATGCCAAAGATCAGATCGGA
CAATCGAATGCGGACAATCCGGCGTTTACTCCCGTAATGTACGATCCTCAGGCACCGGTGGGAAGGAGATTCTAC
AGGGACAGTAGTATGCCGACCAGCTCGATTGCCAGGTTGTATCACAGCAGTGCTATTTTGACATCGAAAGGGAAT
ATCTTGATTATGGGGAGTAATCCTAACCTTGACAGGAGCAACGACAAGTATGCGACTGAGTATAGGGTAGAGGTA
CTTGATCCACCCTATATGTTCCAGGAGAGGCCGGTCATCAGAGCATCCCCTCTTATTGTTGATTTCAACGAGAGA
TTTGAAATACTATTGGGTGGAAAGTCCGGGAAGGAAGTCAAAGTGGCGATCATGGACTTTGGATATGCGACTCAC
GGCGTTCATGCGAACTCTAGGCTGGTATGGCTTCGGCACGAGATAGTGGACAATGGAACAAAACTGAGCATCGCA
GCTCCCCCGAATAATCGAATTTACCCTCCAGGGCCTGGGTGGCTTTTCGTGGTTGTGGACGGGATCCCGAGTGAG
GGAGCACAGATCATGATTGGAGATGGAAAAGATCCAGCCGCAAATTAG
Transcript >AgabiH97|054500
ATGGCGCGTTTGTACACTCTCTTCCTCTCGTTCTTTCTTCTTTTTCTCGTCGTTTTAAGCGTCTACGCGCAAAGA
GACAAATGGAATAGGCTTGCGCCTTTTAAACACACCCAAATACGACAGGGCGCTTCGTATTACCCAGGAAAAAGA
TACAAAACTTTCTCCTCTGATTCTCCCTTGATCAAGTACGAAGGAACATGGTCTGTCGCACGATCGAGACAATAT
GACTCGGGCGTTCTTCATATCACTCATCAACGCGGCGCGGCTCTGTCCTTCAACTTCTCTGGCACTGGTATCGTT
TGGCTCGGCAATTGCGATAGGTTTCATGGATACGCTCAAGTAATTCTGGACGACGAGGCGATTGGGACCGTCGAC
CTATCTTGTGATGTGACTTCTCCTTTGAACCGACGGAAGCTTTTCGAGACTTCTGGCCTTGATAACCGACCGCAT
ACAATCAAATTTATCAATCTTGGTTCTCGCCTACGGCATTATGGTGTGGGCGTCATGGACATTGACACTCTTGTC
GTTGTTCCCGGAAAGATTCTGGATTTTTCTCTAGTTGACGGTCACCTCGCGTCATCTATTCAACGTTTGGATCGC
TTAAACCTTCGGCAGAACCAAGGCCCTGGTTGGAAGTTGACGCGACGCGGAACGAGTGGTGTCGCTGCCATGCAA
CTTGCAATTGTCTCTCCAACTCTCGCGATCATAATCGATAAAGTGGAACGCAATCCTTTGACTGTTGACGGGCAT
CCTGCTTGGGCGGCGTTGTACAATTTGGATACGCAGGCTCTTACACCTCTACGACCGGCTTCAAACTCTTTCTGT
GCTGGTGGTGCTTTCTTGTCTAATGGAACTTTGGTCAATGCAGGAGGGAACGCGGTCGTGCAACCGGATTTCGGC
GATGTCGATGGCTCGCAGGGTATCCGTTTATTTCATCCTTGTAACTCTGCGGATGGAGAAGGTTGTGAAATCTAT
GAGGATCCCAAATCGAATAAACTTGCTAGTCCAAGATGGTACACAACAGTGCTCAAAATTCAAGACGGAAGTATC
ATGATTTTAGGTGGCTCTCGCACAGGTGGTTTCATCAACGATCAGAAAAAGAACAATCCCACTCTGGAGTACTTT
CCTCGCAAGTCAATTCATGGTTCCGGTGGTTCACCCATCCATCTGAAATTCCTCGAAGATACTCTTAACTCGAAT
CTCTTCCCAATCGCCTTCTTGTTACCGACTGGGAACATCTTTATTGCTGCAAACAACGATGCTATGATCTACGAT
TGGCAGAGGAATACTGAAGAGAGATTGCCCTCGATTCCAAACGGCGTTCGCGTGACATATCCTATGAGTGGTGTT
GGGCTATTACTACCACTATCCTATGAGGACGACTATAAACCGGAGATTTTGCTTTGTGGTGGTTCGACTCTAGAC
GACAGAAGGGATCCTAAGGATTACTCCTCCCAAGAACCCGCTTCGAAGCAATGCTCCAGAATGGTTGTGACGGAG
CAAGGCATAGCTCGTGGGTGGCAAGTGGAGGAGATGCCGGAAGCACGAATCATGCCCGATGGTATCCTGCTCCCC
ACCGGTCAAGTTCTTATTCTGAATGGCGCTCAGACTGGCGTTGGAGGCTATGGCAATGCCAAAGATCAGATCGGA
CAATCGAATGCGGACAATCCGGCGTTTACTCCCGTAATGTACGATCCTCAGGCACCGGTGGGAAGGAGATTCTAC
AGGGACAGTAGTATGCCGACCAGCTCGATTGCCAGGTTGTATCACAGCAGTGCTATTTTGACATCGAAAGGGAAT
ATCTTGATTATGGGGAGTAATCCTAACCTTGACAGGAGCAACGACAAGTATGCGACTGAGTATAGGGTAGAGGTA
CTTGATCCACCCTATATGTTCCAGGAGAGGCCGGTCATCAGAGCATCCCCTCTTATTGTTGATTTCAACGAGAGA
TTTGAAATACTATTGGGTGGAAAGTCCGGGAAGGAAGTCAAAGTGGCGATCATGGACTTTGGATATGCGACTCAC
GGCGTTCATGCGAACTCTAGGCTGGTATGGCTTCGGCACGAGATAGTGGACAATGGAACAAAACTGAGCATCGCA
GCTCCCCCGAATAATCGAATTTACCCTCCAGGGCCTGGGTGGCTTTTCGTGGTTGTGGACGGGATCCCGAGTGAG
GGAGCACAGATCATGATTGGAGATGGAAAAGATCCAGCCGCAAATTAG
Gene >AgabiH97|054500
ATGGCGCGTTTGTACACTCTCTTCCTCTCGTTCTTTCTTCTTTTTCTCGTCGTTTTAAGCGTCTACGCGCAAAGA
GACAAATGGAATAGGCTTGCGCCTTTTAAACACACCCAAATACGACAGGGCGCTTCGTATTACCCAGGAAAAAGA
TACAAAACTTTCTCCTCTGATTCTCCCTTGATCAAGTACGAAGGAACATGGTCTGTCGCACGATCGAGACAATAT
GACTCGGGCGTTCTTCATATCACTCATCAACGCGGCGCGGCTCTGTCCTTCAACTTCTCTGGCACTGGTATCGTT
TGGCTCGGCAATTGCGATAGGTTTCATGGATACGCTCAAGTAATTCTGGACGACGAGGCGATTGGGACCGTCGAC
CTATCTTGTGATGTGACTTCTCCTTTGAACCGACGGAAGCTTTTCGAGACTTCTGGCCTTGATAACCGACCGCAT
ACAATCAAATTTATCAATCTTGGTTCTCGCCTACGGCATTATGGTGTGGGCGTCATGGACATTGACACTCTTGTC
GTTGTTCCCGGAAAGATTCTGGATTTTTCTCTAGTTGACGGTCACCTCGCGTCATCTATTCAACGTTTGGATCGC
TTAAACCTTCGGCAGAACCAAGGCCCTGGTTGGAAGTTGACGCGACGCGGAACGAGTGGTGTCGCTGCCATGCAA
CTTGCAATTGTCTCTCCAACTCTCGCGATCATAATCGATAAAGTGGAACGCAATCCTTTGACTGTTGACGGGCAT
CCTGCTTGGGCGGCGTTGTACAATTTGGATACGCAGGCTCTTACACCTCTACGACCGGCTTCAAACTCTTTCTGT
GCTGGTGGTGCTTTCTTGTCTAATGGAACTTTGGTCAATGCAGGAGGGAACGCGGTCGTGCAACCGGATTTCGGC
GATGTCGATGGCTCGCAGGGTATCCGTTTATTTCATCCTTGTAACTCTGCGGATGGAGAAGGTTGTGAAATCTAT
GAGGATCCCAAATCGAATAAACTTGCTAGTCCAAGATGGTACACAACAGTGCTCAAAATTCAAGACGGAAGTATC
ATGATTTTAGGTGGCTCTCGCACAGGTGGTTTCATCAACGATCAGAAAAAGAACAATCCCACTCTGGAGTACTTT
CCTCGCAAGTCAATTCATGGTTCCGGTGGTTCACCCATCCATCTGAAATTCCTCGAAGATACTCTTAACTCGAAT
CTCTTCCCAATCGCCTTCTTGTTACCGACTGGGAACATCTTTATTGCTGCAAACAACGATGCTATGATCTACGAT
TGGCAGAGGAATACTGAAGAGAGATTGCCCTCGATTCCAAACGGCGTTCGCGTGACATATCCTATGAGTGGTGTT
GGGCTATTACTACCACTATCCTATGAGGACGACTATAAACCGGAGATTTTGCTTTGTGGTGGTTCGACTCTAGAC
GACAGAAGGGATCCTAAGGATTACTCCTCCCAAGAACCCGCTTCGAAGCAATGCTCCAGAATGGTTGTGACGGAG
CAAGGCATAGCTCGTGGGTGGCAAGTGGAGGAGATGCCGGAAGCACGAATCATGCCCGATGGTATCCTGCTCCCC
ACCGGTCAAGTTCTTATTCTGAATGGCGCTCAGACTGGCGTTGGAGGCTATGGCAATGCCAAAGATCAGATCGGA
CAATCGAATGCGGACAATCCGGCGTTTACTCCCGTAATGTACGATCCTCAGGCACCGGTGGGAAGGAGATTCTAC
AGGGACAGTAGTATGCCGACCAGCTCGATTGCCAGGTTGTATCACAGCAGTGCTATTTTGACATCGAAAGGGAAT
ATCTTGATTATGGGGAGTAATCCTAACCTTGACAGGAGCAACGACAAGTATGCGACTGAGTATAGGGTAGAGGTA
CTTGATCCACCCTATATGTTCCAGGAGAGGCCGGTCATCAGAGCATCCCCTCTTATTGTTGATTTCAACGAGAGA
TTTGAAATACTATTGGGTGGAAAGTCCGGGAAGGAAGTCAAAGGTAAGCCATCCGCATTTACTGTGTACATCTGA
GAACTGACAATGCCGTAGTGGCGATCATGGACTTTGGATATGCGACTCACGGCGTTCATGCGAACTCTAGGCTGG
TATGGCTTCGGCACGAGATAGTGGACAATGGAACAAAACTGAGCATCGCAGCTCCCCCGAATAATCGAATTTACC
CTCCAGGGCCTGGGTGGCTTTTCGTGGTTGTGGACGGGATCCCGAGTGAGGGAGCACAGATCATGATTGGAGATG
GAAAAGATCCAGCCGCAAATTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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