Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabiH97|054380
Gene name
Locationscaffold_3:456942..459643
Strand+
Gene length (bp)2701
Transcript length (bp)1572
Coding sequence length (bp)1572
Protein length (aa) 524

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF07690 MFS_1 Major Facilitator Superfamily 1.3E-27 67 431

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|Q9C0V8|YHJ1_SCHPO Uncharacterized transporter PB10D8.01 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBPB10D8.01 PE=3 SV=1 44 523 4.0E-82
sp|B5BP49|YP55_SCHPO Uncharacterized transporter C460.05 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC460.05 PE=3 SV=1 4 522 7.0E-81
sp|Q9C0U9|YQD3_SCHPO Uncharacterized transporter PB1C11.03 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCPB1C11.03 PE=1 SV=1 44 523 2.0E-80
sp|O74923|YJ7D_SCHPO Uncharacterized transporter C757.13 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC757.13 PE=3 SV=1 17 521 3.0E-78
sp|Q07904|THI73_YEAST Thiamine pathway transporter THI73 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=THI73 PE=1 SV=1 26 522 2.0E-75
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Swissprot ID Swissprot Description Start End E-value
sp|Q9C0V8|YHJ1_SCHPO Uncharacterized transporter PB10D8.01 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBPB10D8.01 PE=3 SV=1 44 523 4.0E-82
sp|B5BP49|YP55_SCHPO Uncharacterized transporter C460.05 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC460.05 PE=3 SV=1 4 522 7.0E-81
sp|Q9C0U9|YQD3_SCHPO Uncharacterized transporter PB1C11.03 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCPB1C11.03 PE=1 SV=1 44 523 2.0E-80
sp|O74923|YJ7D_SCHPO Uncharacterized transporter C757.13 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC757.13 PE=3 SV=1 17 521 3.0E-78
sp|Q07904|THI73_YEAST Thiamine pathway transporter THI73 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=THI73 PE=1 SV=1 26 522 2.0E-75
sp|P15365|DAL5_YEAST Allantoate permease OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=DAL5 PE=1 SV=1 3 523 3.0E-75
sp|O94491|YC7A_SCHPO Uncharacterized transporter C417.10 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC417.10 PE=3 SV=1 4 523 5.0E-70
sp|O94572|YGDF_SCHPO Uncharacterized transporter C1773.15 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC1773.15 PE=3 SV=1 10 521 3.0E-62
sp|Q12235|YCT1_YEAST High affinity cysteine transporter OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YCT1 PE=1 SV=1 15 523 6.0E-62
sp|Q10097|YAOI_SCHPO Uncharacterized transporter C11D3.18C OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC11D3.18c PE=3 SV=1 17 487 3.0E-46
sp|Q9US37|YFZ4_SCHPO Uncharacterized transporter C1039.04 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1039.04 PE=3 SV=1 6 486 5.0E-46
sp|Q9P6J0|YHDC_SCHPO Uncharacterized transporter C1683.12 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC1683.12 PE=3 SV=1 20 483 5.0E-41
sp|Q9US44|YIZG_SCHPO Uncharacterized transporter C1002.16c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1002.16c PE=3 SV=1 56 482 5.0E-38
sp|P53322|TNA1_YEAST High-affinity nicotinic acid transporter OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TNA1 PE=1 SV=1 3 522 6.0E-26
sp|P70786|TUB3_AGRVI Putative tartrate transporter OS=Agrobacterium vitis GN=ttuB PE=2 SV=1 42 337 8.0E-19
sp|O43000|LIZ1_SCHPO Pantothenate transporter liz1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=liz1 PE=2 SV=2 48 263 3.0E-18
sp|Q44470|TUB4_AGRVI Putative tartrate transporter OS=Agrobacterium vitis GN=ttuB PE=2 SV=1 45 337 4.0E-17
sp|P40445|YIQ6_YEAST Uncharacterized transporter YIL166C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YIL166C PE=1 SV=1 46 509 1.0E-14
sp|P25621|FEN2_YEAST Pantothenate transporter FEN2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=FEN2 PE=1 SV=1 51 245 1.0E-14
sp|P39709|SEO1_YEAST Probable transporter SEO1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SEO1 PE=1 SV=1 51 294 2.0E-14
sp|Q88FY6|NICT_PSEPK Putative metabolite transport protein NicT OS=Pseudomonas putida (strain KT2440) GN=nicT PE=2 SV=1 38 293 9.0E-14
sp|O13879|YE1F_SCHPO Uncharacterized transporter C1B3.15C OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1B3.15c PE=3 SV=1 17 360 2.0E-12
sp|P76470|RHMT_ECOLI Inner membrane transport protein RhmT OS=Escherichia coli (strain K12) GN=rhmT PE=1 SV=2 55 340 6.0E-12
sp|O13880|VHT1_SCHPO Vitamin H transporter 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=vht1 PE=2 SV=1 51 338 7.0E-12
sp|P53241|VHT1_YEAST Vitamin H transporter OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=VHT1 PE=1 SV=1 48 295 2.0E-08
sp|Q05181|PHT1_PSEPU Phthalate transporter OS=Pseudomonas putida GN=pht1 PE=3 SV=1 48 307 1.0E-07
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GO

GO Term Description Terminal node
GO:0055085 transmembrane transport Yes
GO:0022857 transmembrane transporter activity Yes
GO:0051179 localization No
GO:0003674 molecular_function No
GO:0051234 establishment of localization No
GO:0008150 biological_process No
GO:0009987 cellular process No
GO:0005215 transporter activity No
GO:0006810 transport No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 58 0.45

Transmembrane Domains

Domain # Start End Length
1 98 120 22
2 152 174 22
3 187 209 22
4 219 241 22
5 316 338 22
6 353 375 22
7 382 404 22
8 414 433 19
9 446 468 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Developmental stages of Agaricus bisporus (strain A15). Published in Pelkmans et al, Applied Microbiology and Biotechnology, 2016

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >AgabiH97|054380
MGSDTNNSGKTEELQLDIKESPAHIAEQDDVDVAAKLAATADGPLDPETARRLRRKIDLHLMPLMCILYLMTFAD
KISLGQSAVLGLLQGVRLTQNQFNWLGTIFYLSYLAFQYPQNLALQKFPVGKWMSINIFIWSIALLSHAACKSFG
GLFAVRFILGLCEGAITPGFLIVTSMFYTREEQTRRVGYWFLMNGIAVIFLGFVAFGTLHTKTSKFMPWQWLMII
TGLLTLVTSILFWIFFPDSPANARFLTPTERAQAVQRIKQNQTGVENKKWKRDQFIEAFTDPKTWMLAFFAALAN
VFNSITNQRQIIVSMFGFTPIQTTLIGCVDGVAEILWIWLAVTAATRLKFGRAYAGVFMFGIALIGAILLNTISL
HKKVGLLFCYWLTIAAISPFTLALGWLASITAGHTKRTTVNAIVFVAYGIGNAAGPFMWKKVYQPRNRVPWIINA
VVFGVCALVLLLIRAYLVWENKKRDEDFGEKSDYYDDVYLTHFDEKGNPVQKKVDRAFLDLTDIQNREFRYIL*
Coding >AgabiH97|054380
ATGGGTTCCGATACAAATAATTCCGGAAAGACGGAGGAGTTGCAGCTCGACATCAAGGAGTCCCCTGCCCATATC
GCAGAGCAGGACGACGTCGATGTTGCTGCAAAGCTCGCAGCCACTGCTGATGGGCCCTTGGATCCAGAGACAGCC
CGACGCCTTCGACGAAAGATCGATTTGCACCTCATGCCTTTAATGTGTATATTGTATCTAATGACTTTTGCGGAC
AAAATTTCCCTTGGACAATCTGCAGTTTTGGGACTTTTGCAAGGAGTTCGCCTTACTCAGAATCAATTTAACTGG
CTTGGAACTATATTCTACCTTAGCTATTTGGCTTTTCAGTACCCTCAGAACCTGGCTTTGCAAAAGTTTCCTGTG
GGGAAATGGATGAGCATCAATATTTTCATATGGTCTATAGCTTTGCTGTCACACGCGGCATGTAAATCCTTCGGG
GGTTTATTTGCCGTACGATTCATCCTCGGTCTCTGTGAGGGTGCTATCACTCCCGGCTTCTTGATCGTCACATCG
ATGTTCTATACGCGTGAAGAGCAAACTAGGAGGGTTGGTTATTGGTTCCTTATGAATGGCATAGCAGTCATTTTC
CTCGGCTTTGTTGCCTTTGGAACACTGCATACTAAGACATCTAAATTCATGCCTTGGCAATGGCTTATGATAATT
ACCGGTCTTCTTACGCTCGTCACTTCGATTCTATTCTGGATCTTCTTCCCTGATAGCCCGGCAAATGCCCGTTTC
CTGACTCCAACAGAGCGCGCACAAGCCGTCCAACGCATCAAACAAAACCAGACAGGAGTGGAAAATAAGAAGTGG
AAGCGTGATCAGTTCATCGAAGCATTCACAGACCCGAAAACATGGATGCTTGCTTTTTTTGCCGCTCTTGCGAAC
GTCTTCAACTCCATCACGAATCAACGTCAAATTATCGTCTCCATGTTTGGATTTACTCCCATTCAAACAACCTTG
ATTGGTTGTGTTGACGGTGTGGCTGAGATTCTCTGGATTTGGCTCGCTGTCACTGCCGCCACAAGATTGAAATTC
GGTAGAGCTTATGCTGGAGTTTTTATGTTTGGTATCGCGCTCATCGGAGCCATACTCCTCAACACGATTTCCTTG
CACAAAAAAGTTGGATTATTATTTTGCTATTGGCTTACGATCGCTGCTATTTCACCTTTCACTCTGGCCTTGGGA
TGGCTTGCTTCTATCACCGCCGGCCACACAAAGAGAACAACTGTCAATGCGATAGTTTTTGTTGCATATGGTATT
GGTAATGCTGCCGGTCCCTTCATGTGGAAGAAAGTATACCAACCCAGAAATCGCGTTCCATGGATTATCAATGCC
GTCGTTTTCGGAGTTTGCGCCCTCGTCCTTCTTCTGATTCGAGCATACCTCGTCTGGGAGAATAAAAAGAGGGAT
GAAGACTTTGGGGAGAAGAGTGATTATTACGATGATGTATATCTTACTCATTTCGATGAGAAAGGCAACCCTGTT
CAAAAGAAAGTTGACAGAGCATTCCTCGATCTCACAGATATCCAGAACCGTGAATTCCGTTACATACTTTAA
Transcript >AgabiH97|054380
ATGGGTTCCGATACAAATAATTCCGGAAAGACGGAGGAGTTGCAGCTCGACATCAAGGAGTCCCCTGCCCATATC
GCAGAGCAGGACGACGTCGATGTTGCTGCAAAGCTCGCAGCCACTGCTGATGGGCCCTTGGATCCAGAGACAGCC
CGACGCCTTCGACGAAAGATCGATTTGCACCTCATGCCTTTAATGTGTATATTGTATCTAATGACTTTTGCGGAC
AAAATTTCCCTTGGACAATCTGCAGTTTTGGGACTTTTGCAAGGAGTTCGCCTTACTCAGAATCAATTTAACTGG
CTTGGAACTATATTCTACCTTAGCTATTTGGCTTTTCAGTACCCTCAGAACCTGGCTTTGCAAAAGTTTCCTGTG
GGGAAATGGATGAGCATCAATATTTTCATATGGTCTATAGCTTTGCTGTCACACGCGGCATGTAAATCCTTCGGG
GGTTTATTTGCCGTACGATTCATCCTCGGTCTCTGTGAGGGTGCTATCACTCCCGGCTTCTTGATCGTCACATCG
ATGTTCTATACGCGTGAAGAGCAAACTAGGAGGGTTGGTTATTGGTTCCTTATGAATGGCATAGCAGTCATTTTC
CTCGGCTTTGTTGCCTTTGGAACACTGCATACTAAGACATCTAAATTCATGCCTTGGCAATGGCTTATGATAATT
ACCGGTCTTCTTACGCTCGTCACTTCGATTCTATTCTGGATCTTCTTCCCTGATAGCCCGGCAAATGCCCGTTTC
CTGACTCCAACAGAGCGCGCACAAGCCGTCCAACGCATCAAACAAAACCAGACAGGAGTGGAAAATAAGAAGTGG
AAGCGTGATCAGTTCATCGAAGCATTCACAGACCCGAAAACATGGATGCTTGCTTTTTTTGCCGCTCTTGCGAAC
GTCTTCAACTCCATCACGAATCAACGTCAAATTATCGTCTCCATGTTTGGATTTACTCCCATTCAAACAACCTTG
ATTGGTTGTGTTGACGGTGTGGCTGAGATTCTCTGGATTTGGCTCGCTGTCACTGCCGCCACAAGATTGAAATTC
GGTAGAGCTTATGCTGGAGTTTTTATGTTTGGTATCGCGCTCATCGGAGCCATACTCCTCAACACGATTTCCTTG
CACAAAAAAGTTGGATTATTATTTTGCTATTGGCTTACGATCGCTGCTATTTCACCTTTCACTCTGGCCTTGGGA
TGGCTTGCTTCTATCACCGCCGGCCACACAAAGAGAACAACTGTCAATGCGATAGTTTTTGTTGCATATGGTATT
GGTAATGCTGCCGGTCCCTTCATGTGGAAGAAAGTATACCAACCCAGAAATCGCGTTCCATGGATTATCAATGCC
GTCGTTTTCGGAGTTTGCGCCCTCGTCCTTCTTCTGATTCGAGCATACCTCGTCTGGGAGAATAAAAAGAGGGAT
GAAGACTTTGGGGAGAAGAGTGATTATTACGATGATGTATATCTTACTCATTTCGATGAGAAAGGCAACCCTGTT
CAAAAGAAAGTTGACAGAGCATTCCTCGATCTCACAGATATCCAGAACCGTGAATTCCGTTACATACTTTAA
Gene >AgabiH97|054380
ATGGGTTCCGATACAAATAATTCCGGAAAGACGGAGGAGTTGCAGCTCGACATCAAGGAGTCCCCTGCCCATATC
GCAGAGCAGGACGACGTCGATGTTGCTGCAAAGCTCGCAGCCACTGCTGATGGGCCCTTGGATCCAGAGACAGCC
CGACGCCTTCGGTGAGCGGATTCTACCCCATTTTTATATTGAAAATTGACGGTACTGATCACTCTTCCACAGACG
AAAGATCGATTTGCACCTCATGCCTTTAATGTGTAGTTCGTATAACTTTTCTACCCTTGGTATGCCGAGAATTGA
CCAGGCCTTGGTTTATCGACAGTATTGTATCTGTGAGTTAGACCCTTTGACTTCAGGAGACTTCTCTGATGGTCG
TCAGAATGACTTTTGCGGACAAAATTTCCCTTGGACAATCTGCAGTTTTGGGACTTTTGTTAGTCTATCAACCCT
ATAACCGTCTTTCTCGAATTTCATTCTTTATCTGACAGGCAAGGAGTTCGCCTTACTCAGAATCAATTTAACTGG
CTTGGAACTATATTCTACCTTAGCTATTTGGCTTTTCAGGTGCATTTCCTTTTCCTATCTCCCCCTTATTTCTCG
GCTGACTTCATTCAATAGTACCCTCAGAACCTGGCTTTGCAAAAGTTTCCTGTGGGGAAATGGATGAGGTATGGA
ACTTGTCCGCTGTATGTTCAACTGCATTGACCAGTTGGGATTACCTTGCAGCATCAATATTTTCATATGGTCTAT
AGCTTTGCTGTCACACGCGGCATGTAAATCCTTCGGGGGTTTATTTGCCGTACGATTCATCCTCGGTCTCTGTGA
GGGTATGGAAATGCAATATCCGAATTAAGTCGTGTTTTCACGTCGGCCACAGGTGCTATCACTCCCGGCTTCTTG
ATCGTCACATCGATGTTCTATACGCGTGAAGAGCAAACTAGGAGGGTTGGTTATTGGTGTACGTGTTTGAAATTC
TGTTGGAATTATCTCATTCACACAAGAAAAACGCAGTCCTTATGAATGGCATAGCAGTCATTTTCCTCGGCTTTG
TTGCCTTTGGAACACTGCATACTAAGGTTTGGCCATATTACCCCCTTCCGAGCTCTAACACTCACCTTGATTCTT
GTAGACATCTAAATTCATGCCTTGGCAATGGCAAGTCTTCCTTGGCATACTGGTTGTGTACTTCAATATAGAATA
CGGTTCACAGGCTTATGATAATTACCGGTCTTCTTACGCTCGTCACTTCGATTCTATTCTGGTGGGCGTTCACTA
TGGCTTCTTCGCATTTTTTTTTTCTGATGAAATACAGGATCTTCTTCCCTGATAGCCCGGCAAATGCCCGTTTCC
TGACTCCAACAGAGCGCGCACAAGCCGTCCAACGCATCAAACAAAACCAGACAGGAGTGGAAAATAAGAAGTGGA
AGCGTGATCAGTTGAGTGTTGTGCCTGAGGAGCATCATAGGAAGTTGTTTGACTGATATCATTCTGACTTAGGTT
CATCGAAGCATTCACAGACCCGAAAACATGGATGCTTGCTTTTTTTGCCGCTCTTGCGTACGTCCCGGCTTCGGA
AAGACTGGTGGCTCGAGTTTATCTAATCACACCCCTGTTTTAGGAACGTCTTCAACTCCGTATGTCAACATCATC
CCACCTTCTCATCTCTCAAGTCTTTAATGGATGTACCATCAGATCACGAATCAACGTCAAATTATCGTCTCCATG
TTTGGATTTACTCCCATTCAAACAACCTTGATTGGTTGTGTTGACGGTGTGGCTGAGAGTGCGTGTCATGATCAC
AAGCTTACTTCACGGGAATAAAAATCTCTAATCACCGATTGTATCGCATTTATGATTTAGTTCTCTGGATTTGGC
TCGCTGTCACTGCCGCCACAAGATTGAAATTCGGTAGAGCTTATGCTGGAGTTTTTATGTTTGGTATCGCGCTCA
TCGGAGCCATACTCCTCAACACGATTTCCTTGCACAAAAAAGTTGGATTATTATTTTGCTATTGGCTTACGAGTG
CGTTTTTCGCTTGGAGTTATATATCATCAATAACTGATATCTATGTTCACAGTCGCTGCTATTTCACCTTTCACT
CTGGCCTTGGGATGGCTTGCTTCTATCACCGCCGGCCACACAAAGAGTGAGTTTATTATGTTTATGCGCCAGTAT
TTTCTTACATAGATACGTGGTTATAGGAACAACTGTCAATGCGATAGTTTTTGTTGCATATGGTATTGGTAATGC
TGCCGGTCCCTTCATGTGGAAGAAAGTATACCAACCCAGGTTCGACTATTATTACTACATATTCCCGATGATGAT
CATAAACTGATCTTTCAACACTTCTCATGCACATTTAGAAATCGCGTTCCATGGATTATCAATGCCGTCGTTTTC
GGAGTTTGCGCCCTCGTCCTTCTTCTGATTCGAGCATACCTCGTCTGGGAGAATAAAAAGAGGGATGAAGACTTT
GGGGAGAAGAGTGATTATTACGATGATGTATATCTTACTCATTTCGATGAGAAAGGCAACCCTGTTCAAAAGAAA
GTTGACAGAGTACGTTTAAATTTTTCTTTTTATTATTAATCTCGGTCTTCAGAAACAATTTTTTTTACTGATTCA
TTCGTCTATTTGTGTTTTACAGGCATTCCTCGATCTCACAGATATCCAGAACCGTGAATTCCGTTACATACTTTA
A

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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