Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabiH97|054330
Gene name
Locationscaffold_3:445163..446581
Strand-
Gene length (bp)1418
Transcript length (bp)1281
Coding sequence length (bp)1281
Protein length (aa) 427

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 35 0.5

Transmembrane Domains

Domain # Start End Length
1 15 36 21
2 242 264 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Developmental stages of Agaricus bisporus (strain A15). Published in Pelkmans et al, Applied Microbiology and Biotechnology, 2016

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >AgabiH97|054330
MPAGSVFFHERYPSLTVFTLFLLYFFILLQPVAAVLKNVTIDDQKGDVRTGKAPIFAPDLAWANQACVGCKVGYD
PDQLFDNTATAATFMPDKGVINNTAEFDFNGTAIYIFFTLFYNEGEQVTVNTECNFTLDNESPVFFNHFGDPTVP
AQKKRDYHTLVFSKTGLEYKPHRMLISMSDVTYHVFLSFDYAQYTIDEAVDLPTSTTDVVPSPTSTQSLVDSPSS
SPSSSPSPKTPKTIIGIVVGGVLGGLAVLAGFLGLLLFYRRGTNRSPKRRKPGPATPRPFVYSQRTNPSQSTSSP
PLTRAMNPTSVPSPPEAARPLSIATPNLTQAWNVDAPRSSFQPPPSYPGSNRPGSLVEHRIRDANRRMQNLTIEI
ATTSSQSSKARTSSSRATAELVEEVKRLRREIQILKQSQRLPLDPPPQYDE*
Coding >AgabiH97|054330
ATGCCTGCTGGCAGCGTCTTCTTCCATGAACGATATCCTTCCTTGACAGTCTTCACGCTATTTCTCCTCTACTTT
TTCATATTACTCCAACCGGTGGCAGCTGTGTTGAAGAACGTTACAATCGACGACCAGAAAGGGGACGTGCGCACT
GGAAAAGCTCCCATATTCGCTCCGGATCTTGCTTGGGCGAACCAGGCTTGTGTTGGATGCAAAGTTGGTTATGAC
CCGGACCAGCTCTTTGATAATACCGCGACGGCTGCCACTTTTATGCCCGACAAAGGCGTCATTAACAACACCGCG
GAATTCGACTTTAATGGCACGGCCATTTATATCTTCTTTACTCTCTTCTACAATGAAGGAGAACAAGTTACGGTC
AATACGGAGTGTAACTTTACGCTTGACAACGAATCTCCTGTATTCTTTAACCACTTTGGTGATCCGACAGTACCC
GCACAAAAGAAAAGGGATTACCATACGCTAGTATTTAGCAAGACGGGGCTTGAATATAAACCTCATCGTATGCTG
ATTTCGATGTCGGATGTGACGTATCATGTCTTCCTGAGCTTTGATTATGCTCAATATACCATTGACGAAGCAGTT
GATTTACCTACAAGTACCACCGATGTTGTGCCATCACCAACATCCACCCAGTCTCTCGTAGACTCTCCGTCATCG
TCACCGTCATCGTCACCTTCGCCGAAGACACCGAAGACAATAATTGGTATCGTAGTTGGAGGCGTCTTAGGTGGT
TTAGCGGTTCTGGCAGGTTTTCTTGGCCTGCTCTTGTTCTATCGTCGTGGCACCAATCGTTCCCCAAAACGACGC
AAACCTGGCCCAGCAACTCCTCGACCATTTGTATACTCACAAAGGACAAATCCTAGTCAGAGCACGTCTTCACCG
CCACTGACTCGGGCAATGAATCCAACATCCGTACCATCACCGCCTGAAGCAGCTCGTCCTCTTTCAATTGCAACC
CCAAACTTGACACAAGCATGGAATGTAGATGCTCCCAGATCTTCATTTCAACCGCCTCCATCATATCCGGGATCA
AATCGTCCAGGATCTCTCGTCGAACATCGTATACGAGACGCCAATCGACGTATGCAGAATTTGACAATTGAAATT
GCAACTACCTCGTCGCAATCGAGTAAAGCCAGAACATCTTCATCGAGGGCGACGGCTGAGTTGGTGGAAGAAGTG
AAGAGGCTTAGGCGTGAAATTCAAATATTAAAACAATCACAGAGGTTACCACTTGACCCTCCCCCGCAATACGAT
GAATGA
Transcript >AgabiH97|054330
ATGCCTGCTGGCAGCGTCTTCTTCCATGAACGATATCCTTCCTTGACAGTCTTCACGCTATTTCTCCTCTACTTT
TTCATATTACTCCAACCGGTGGCAGCTGTGTTGAAGAACGTTACAATCGACGACCAGAAAGGGGACGTGCGCACT
GGAAAAGCTCCCATATTCGCTCCGGATCTTGCTTGGGCGAACCAGGCTTGTGTTGGATGCAAAGTTGGTTATGAC
CCGGACCAGCTCTTTGATAATACCGCGACGGCTGCCACTTTTATGCCCGACAAAGGCGTCATTAACAACACCGCG
GAATTCGACTTTAATGGCACGGCCATTTATATCTTCTTTACTCTCTTCTACAATGAAGGAGAACAAGTTACGGTC
AATACGGAGTGTAACTTTACGCTTGACAACGAATCTCCTGTATTCTTTAACCACTTTGGTGATCCGACAGTACCC
GCACAAAAGAAAAGGGATTACCATACGCTAGTATTTAGCAAGACGGGGCTTGAATATAAACCTCATCGTATGCTG
ATTTCGATGTCGGATGTGACGTATCATGTCTTCCTGAGCTTTGATTATGCTCAATATACCATTGACGAAGCAGTT
GATTTACCTACAAGTACCACCGATGTTGTGCCATCACCAACATCCACCCAGTCTCTCGTAGACTCTCCGTCATCG
TCACCGTCATCGTCACCTTCGCCGAAGACACCGAAGACAATAATTGGTATCGTAGTTGGAGGCGTCTTAGGTGGT
TTAGCGGTTCTGGCAGGTTTTCTTGGCCTGCTCTTGTTCTATCGTCGTGGCACCAATCGTTCCCCAAAACGACGC
AAACCTGGCCCAGCAACTCCTCGACCATTTGTATACTCACAAAGGACAAATCCTAGTCAGAGCACGTCTTCACCG
CCACTGACTCGGGCAATGAATCCAACATCCGTACCATCACCGCCTGAAGCAGCTCGTCCTCTTTCAATTGCAACC
CCAAACTTGACACAAGCATGGAATGTAGATGCTCCCAGATCTTCATTTCAACCGCCTCCATCATATCCGGGATCA
AATCGTCCAGGATCTCTCGTCGAACATCGTATACGAGACGCCAATCGACGTATGCAGAATTTGACAATTGAAATT
GCAACTACCTCGTCGCAATCGAGTAAAGCCAGAACATCTTCATCGAGGGCGACGGCTGAGTTGGTGGAAGAAGTG
AAGAGGCTTAGGCGTGAAATTCAAATATTAAAACAATCACAGAGGTTACCACTTGACCCTCCCCCGCAATACGAT
GAATGA
Gene >AgabiH97|054330
ATGCCTGCTGGCAGCGTCTTCTTCCATGAACGATATCCTTCCTTGACAGTCTTCACGCTATTTCTCCTCTACTTT
TTCATATTACTCCAACCGGTGGCAGCTGTGTTGAAGAACGTTACAATCGACGACCAGAAAGGGGACGTGCGCACT
GGAAAAGCTCCCATATTCGCTCCGGATCTTGCTTGGGCGAACCAGGCTTGTGTTGGATGCAAAGTTGGTTATGAC
CCGGACCAGCTCTTTGATAATACCGCGACGGCTGCCACTTTTATGCCCGACAAAGGCGTCATTAACAACACCGCG
GAATTCGACTTTAATGGTATGATAAACCATTGATACTTGACATGTTCAGTCAGTCTGACTTGTTCCGTGCTACTT
GATGTCCGTTTAAGGCACGGCCATTTATATCTTCTTTACTCTCTTCTACAATGAAGGAGAACAAGTTACGGTCAA
TACGGAGTGTAACTTTACGCTTGACAACGAATCTCCTGTATTCTTTAACCACTTTGGTGATCCGACAGTACCCGC
ACAAAAGAAAAGGGATTACCATACGCTAGTATTTAGCAAGACGGGGCTTGAATATAAACCTCATCGTATGCTGAT
TTCGATGTCGGATGTGACGTATCATGTCTTCCTGAGCTTTGATTATGCTCAATATACGTAAGTTTCACGAAAACA
ACCATGTCTTTTTCGTCATGAGCTGAATCAAATGTTTTTTCTGTAGCATTGACGAAGCAGTTGATTTACCTACAA
GTACCACCGATGTTGTGCCATCACCAACATCCACCCAGTCTCTCGTAGACTCTCCGTCATCGTCACCGTCATCGT
CACCTTCGCCGAAGACACCGAAGACAATAATTGGTATCGTAGTTGGAGGCGTCTTAGGTGGTTTAGCGGTTCTGG
CAGGTTTTCTTGGCCTGCTCTTGTTCTATCGTCGTGGCACCAATCGTTCCCCAAAACGACGCAAACCTGGCCCAG
CAACTCCTCGACCATTTGTATACTCACAAAGGACAAATCCTAGTCAGAGCACGTCTTCACCGCCACTGACTCGGG
CAATGAATCCAACATCCGTACCATCACCGCCTGAAGCAGCTCGTCCTCTTTCAATTGCAACCCCAAACTTGACAC
AAGCATGGAATGTAGATGCTCCCAGATCTTCATTTCAACCGCCTCCATCATATCCGGGATCAAATCGTCCAGGAT
CTCTCGTCGAACATCGTATACGAGACGCCAATCGACGTATGCAGAATTTGACAATTGAAATTGCAACTACCTCGT
CGCAATCGAGTAAAGCCAGAACATCTTCATCGAGGGCGACGGCTGAGTTGGTGGAAGAAGTGAAGAGGCTTAGGC
GTGAAATTCAAATATTAAAACAATCACAGAGGTTACCACTTGACCCTCCCCCGCAATACGATGAATGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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