Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabiH97|054320
Gene name
Locationscaffold_3:442542..443916
Strand-
Gene length (bp)1374
Transcript length (bp)1233
Coding sequence length (bp)1233
Protein length (aa) 411

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 35 0.45

Transmembrane Domains

Domain # Start End Length
1 12 34 22
2 249 271 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Developmental stages of Agaricus bisporus (strain A15). Published in Pelkmans et al, Applied Microbiology and Biotechnology, 2016

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >AgabiH97|054320
MSAGCVFFHKRFLSLKVLTLFLLHLSALLQPVVAVLKNITIDDQNGDGVSGTFPIYAPGVAWANQDCAGCAIGYD
TAQLFRHTATAATFMPDRGFSSNTVDFDFNGTAIYIFFTLFYNEGEVVTVNTECNFTVDNEPPIFFSHSGDPTVP
AHAKRDYQVPVFSKEGLEYKPHHMRISMSDVTYHVFLSFDYAQYTIDEATDIPTSTIDLVTSDVVPSLTSSQSLV
DSPSSSSPSPSSPSPNLSKQTVGIIVGSILGGLAVLAGLLGLLWLYCRDRYPKPSTQTENSGQIMSYRPPTWAIE
STIAPSTTGATGSPSFATLSSTQGRSTDVPGSSISGSYSQWSSVGHRIRNANRRMRNLTAEIASASSRSSNRTVS
SGVTAELLEEVKKLKREIQILKQSQKSPPKVLALR*
Coding >AgabiH97|054320
ATGTCTGCTGGTTGCGTCTTCTTCCATAAACGATTCCTCTCCTTAAAAGTCCTCACTCTATTTCTTCTTCACCTT
TCCGCGTTACTCCAACCAGTGGTAGCTGTACTGAAGAACATTACCATTGACGACCAGAATGGAGACGGGGTATCT
GGGACTTTTCCAATTTATGCTCCGGGAGTTGCTTGGGCGAACCAGGATTGTGCTGGATGCGCAATTGGGTATGAC
ACGGCTCAGCTCTTTCGACATACGGCGACGGCTGCCACTTTCATGCCCGACAGAGGCTTCAGTTCCAACACAGTC
GATTTTGACTTTAATGGAACGGCGATTTATATCTTCTTTACTCTCTTCTACAACGAGGGAGAAGTTGTTACTGTC
AATACGGAGTGTAACTTTACAGTTGACAATGAGCCTCCCATATTTTTTAGCCACTCTGGTGATCCGACAGTTCCT
GCTCATGCCAAAAGGGATTACCAAGTGCCAGTGTTCAGCAAGGAAGGGCTTGAATACAAGCCTCATCATATGCGG
ATTTCGATGTCGGATGTGACGTATCATGTCTTCCTGAGCTTTGATTATGCTCAATATACCATTGACGAAGCTACT
GATATACCCACAAGCACCATTGATCTGGTGACAAGCGACGTTGTGCCATCGCTGACATCCTCCCAGTCTCTCGTA
GACTCTCCGTCATCGTCATCGCCATCGCCATCGTCACCTTCGCCGAACTTGTCTAAGCAAACCGTTGGTATTATA
GTCGGAAGCATCTTAGGTGGTTTAGCGGTCCTGGCAGGTCTTCTAGGCCTGCTCTGGCTCTATTGTCGTGATCGG
TACCCGAAACCAAGCACACAAACGGAAAATTCTGGTCAGATTATGTCTTACCGACCACCGACGTGGGCTATAGAA
TCGACAATCGCACCATCTACAACTGGAGCAACTGGTTCTCCTTCATTTGCAACGCTAAGTTCGACGCAGGGACGA
AGCACAGATGTTCCCGGATCTTCAATTTCGGGATCATATTCTCAATGGTCTTCTGTCGGACATCGTATACGAAAC
GCAAATCGACGCATGCGAAATTTGACAGCCGAAATTGCATCCGCATCGTCACGATCCAGTAACAGAACAGTTTCT
TCTGGGGTGACAGCGGAATTGCTGGAAGAGGTGAAAAAGCTTAAGCGAGAAATTCAAATATTGAAACAATCCCAG
AAATCGCCGCCTAAGGTCCTGGCCCTCCGTTAA
Transcript >AgabiH97|054320
ATGTCTGCTGGTTGCGTCTTCTTCCATAAACGATTCCTCTCCTTAAAAGTCCTCACTCTATTTCTTCTTCACCTT
TCCGCGTTACTCCAACCAGTGGTAGCTGTACTGAAGAACATTACCATTGACGACCAGAATGGAGACGGGGTATCT
GGGACTTTTCCAATTTATGCTCCGGGAGTTGCTTGGGCGAACCAGGATTGTGCTGGATGCGCAATTGGGTATGAC
ACGGCTCAGCTCTTTCGACATACGGCGACGGCTGCCACTTTCATGCCCGACAGAGGCTTCAGTTCCAACACAGTC
GATTTTGACTTTAATGGAACGGCGATTTATATCTTCTTTACTCTCTTCTACAACGAGGGAGAAGTTGTTACTGTC
AATACGGAGTGTAACTTTACAGTTGACAATGAGCCTCCCATATTTTTTAGCCACTCTGGTGATCCGACAGTTCCT
GCTCATGCCAAAAGGGATTACCAAGTGCCAGTGTTCAGCAAGGAAGGGCTTGAATACAAGCCTCATCATATGCGG
ATTTCGATGTCGGATGTGACGTATCATGTCTTCCTGAGCTTTGATTATGCTCAATATACCATTGACGAAGCTACT
GATATACCCACAAGCACCATTGATCTGGTGACAAGCGACGTTGTGCCATCGCTGACATCCTCCCAGTCTCTCGTA
GACTCTCCGTCATCGTCATCGCCATCGCCATCGTCACCTTCGCCGAACTTGTCTAAGCAAACCGTTGGTATTATA
GTCGGAAGCATCTTAGGTGGTTTAGCGGTCCTGGCAGGTCTTCTAGGCCTGCTCTGGCTCTATTGTCGTGATCGG
TACCCGAAACCAAGCACACAAACGGAAAATTCTGGTCAGATTATGTCTTACCGACCACCGACGTGGGCTATAGAA
TCGACAATCGCACCATCTACAACTGGAGCAACTGGTTCTCCTTCATTTGCAACGCTAAGTTCGACGCAGGGACGA
AGCACAGATGTTCCCGGATCTTCAATTTCGGGATCATATTCTCAATGGTCTTCTGTCGGACATCGTATACGAAAC
GCAAATCGACGCATGCGAAATTTGACAGCCGAAATTGCATCCGCATCGTCACGATCCAGTAACAGAACAGTTTCT
TCTGGGGTGACAGCGGAATTGCTGGAAGAGGTGAAAAAGCTTAAGCGAGAAATTCAAATATTGAAACAATCCCAG
AAATCGCCGCCTAAGGTCCTGGCCCTCCGTTAA
Gene >AgabiH97|054320
ATGTCTGCTGGTTGCGTCTTCTTCCATAAACGATTCCTCTCCTTAAAAGTCCTCACTCTATTTCTTCTTCACCTT
TCCGCGTTACTCCAACCAGTGGTAGCTGTACTGAAGAACATTACCATTGACGACCAGAATGGAGACGGGGTATCT
GGGACTTTTCCAATTTATGCTCCGGGAGTTGCTTGGGCGAACCAGGATTGTGCTGGATGCGCAATTGGGTATGAC
ACGGCTCAGCTCTTTCGACATACGGCGACGGCTGCCACTTTCATGCCCGACAGAGGCTTCAGTTCCAACACAGTC
GATTTTGACTTTAATGGTATGATAGGTCGTCGATATCTTGACATATTCAGTCAATCTGACCTGTTTTGTGCCTTA
AATGGTGTCTGTCATCAAAGGAACGGCGATTTATATCTTCTTTACTCTCTTCTACAACGAGGGAGAAGTTGTTAC
TGTCAATACGGAGTGTAACTTTACAGTTGACAATGAGCCTCCCATATTTTTTAGCCACTCTGGTGATCCGACAGT
TCCTGCTCATGCCAAAAGGGATTACCAAGTGCCAGTGTTCAGCAAGGAAGGGCTTGAATACAAGCCTCATCATAT
GCGGATTTCGATGTCGGATGTGACGTATCATGTCTTCCTGAGCTTTGATTATGCTCAATATACGTAAGTTTCCTG
AAAGTAACCTCATATTTTCATGATCAACTGAATTAATCTCTTTTGTGTAGCATTGACGAAGCTACTGATATACCC
ACAAGCACCATTGATCTGGTGACAAGCGACGTTGTGCCATCGCTGACATCCTCCCAGTCTCTCGTAGACTCTCCG
TCATCGTCATCGCCATCGCCATCGTCACCTTCGCCGAACTTGTCTAAGCAAACCGTTGGTATTATAGTCGGAAGC
ATCTTAGGTGGTTTAGCGGTCCTGGCAGGTCTTCTAGGCCTGCTCTGGCTCTATTGTCGTGATCGGTACCCGAAA
CCAAGCACACAAACGGAAAATTCTGGTCAGATTATGTCTTACCGACCACCGACGTGGGCTATAGAATCGACAATC
GCACCATCTACAACTGGAGCAACTGGTTCTCCTTCATTTGCAACGCTAAGTTCGACGCAGGGACGAAGCACAGAT
GTTCCCGGATCTTCAATTTCGGGATCATATTCTCAATGGTCTTCTGTCGGACATCGTATACGAAACGCAAATCGA
CGCATGCGAAATTTGACAGCCGAAATTGCATCCGCATCGTCACGATCCAGTAACAGAACAGTTTCTTCTGGGGTG
ACAGCGGAATTGCTGGAAGAGGTGAAAAAGCTTAAGCGAGAAATTCAAATATTGAAACAATCCCAGAAATCGCCG
CCTAAGGTCCTGGCCCTCCGTTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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