Fungal Genomics

Agaricus bisporus var bisporus H39 Agaricus bisporus var bisporus H97 Agaricus bisporus var burnettii H119p4 Aspergillus niger CBS 112.32 Aspergillus niger CBS 113.50 Aspergillus niger CBS 115988 Aspergillus niger CBS 115989 Aspergillus niger CBS 118.52 Aspergillus niger CBS 124.48 Aspergillus niger CBS 131.52 Aspergillus niger CBS 133816 Aspergillus niger CBS 147320 Aspergillus niger CBS 147321 Aspergillus niger CBS 147322 Aspergillus niger CBS 147323 Aspergillus niger CBS 147324 Aspergillus niger CBS 147343 Aspergillus niger CBS 147344 Aspergillus niger CBS 147345 Aspergillus niger CBS 147346 Aspergillus niger CBS 147347 Aspergillus niger CBS 147352 Aspergillus niger CBS 147353 Aspergillus niger CBS 147371 Aspergillus niger CBS 147482 Aspergillus niger CBS 630.78 Aspergillus niger CBS 769.97 Niveomyces coronatus CBS 149186 Ophiocordyceps australis 1348a (Ghana) Ophiocordyceps australis map64 (Brazil) Ophiocordyceps camponoti-floridani Ophiocordyceps camponoti-rufipedis Ophiocordyceps kimflemingae Ophiocordyceps subramaniannii Penicillium roqueforti DTO002I6 Penicillium roqueforti DTO003C3 Penicillium roqueforti DTO003H1 (CBS 147308) Penicillium roqueforti DTO006G1 Penicillium roqueforti DTO006G7 Penicillium roqueforti DTO012A1 Penicillium roqueforti DTO012A2 (CBS 147309) Penicillium roqueforti DTO012A6 (CBS 147310) Penicillium roqueforti DTO012A7 Penicillium roqueforti DTO012A8 Penicillium roqueforti DTO012A9 Penicillium roqueforti DTO013E5 Penicillium roqueforti DTO013F2 Penicillium roqueforti DTO013F5 (CBS 147311) Penicillium roqueforti DTO027I6 Penicillium roqueforti DTO032C6 Penicillium roqueforti DTO039G3 Penicillium roqueforti DTO046C5 Penicillium roqueforti DTO070G2 (CBS 147317) Penicillium roqueforti DTO081F9 (CBS 147318) Penicillium roqueforti DTO101D6 (CBS 147325) Penicillium roqueforti DTO102I9 (CBS 147326) Penicillium roqueforti DTO126G2 (CBS 147330) Penicillium roqueforti DTO127F7 (CBS 147331) Penicillium roqueforti DTO127F9 (CBS 147332) Penicillium roqueforti DTO130C1 (CBS 147333) Penicillium roqueforti DTO163C3 (CBS 147337) Penicillium roqueforti DTO163F5 (CBS 147338) Penicillium roqueforti DTO163G4 (CBS 147339) Penicillium roqueforti DTO265D5 (CBS 147372) Penicillium roqueforti DTO369A1 (CBS 147354) Penicillium roqueforti DTO375B1 (CBS 147355) Penicillium roqueforti DTO377G2 (LCP 96.3914a) Penicillium roqueforti LCP96 04111 Rhodonia placenta FPRL280 Torrubiellomyces zombiae CBS 149187

General Properties

Protein ID	AgabiH97|053420
Gene name
Location	scaffold_3:200842..203415
Strand	-
Gene length (bp)	2573
Transcript length (bp)	2262
Coding sequence length (bp)	2262
Protein length (aa)	754

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PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF00443	UCH	Ubiquitin carboxyl-terminal hydrolase	1.8E-43	289	748

Swissprot hits

GO

GO Term	Description	Terminal node
GO:0016579	protein deubiquitination	Yes
GO:0004843	cysteine-type deubiquitinase activity	Yes
GO:0043412	macromolecule modification	No
GO:0101005	deubiquitinase activity	No
GO:0016787	hydrolase activity	No
GO:1901564	organonitrogen compound metabolic process	No
GO:0071704	organic substance metabolic process	No
GO:0008150	biological_process	No
GO:0070647	protein modification by small protein conjugation or removal	No
GO:0019538	protein metabolic process	No
GO:0008233	peptidase activity	No
GO:0008152	metabolic process	No
GO:0006508	proteolysis	No
GO:0140096	catalytic activity, acting on a protein	No
GO:0043170	macromolecule metabolic process	No
GO:0006807	nitrogen compound metabolic process	No
GO:0008234	cysteine-type peptidase activity	No
GO:0036211	protein modification process	No
GO:0003674	molecular_function	No
GO:0044238	primary metabolic process	No
GO:0003824	catalytic activity	No
GO:0019783	ubiquitin-like protein peptidase activity	No
GO:0070646	protein modification by small protein removal	No

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 59	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Developmental stages of Agaricus bisporus (strain A15). Published in Pelkmans et al, Applied Microbiology and Biotechnology, 2016

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Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>AgabiH97|053420 MGSISGGAGDHAPLSPAQSISSVKSRSHATSLSAYTSIAIWSRRPGDPSKAPGIIISPRAQPPEDIMSKALDLPT PPASPPNPVPVALPSDDFAQEEKKYKTDSTMAMLANSTISSSAVTEVTDVPTLPGSPMSTNTSVSGAGGSLTKEH IASIPAVPAVVATKGETGFGDTTTPEAASSVIAEPASTAAAESQATDIGTPSAKPPTQKSWASLFSSASTSATGI SGTSLSQRTGLPTSSVIGFSIPASATNPSILPIVPVIPAKKSELLNLLTNGPGGGGMDKIRTRGLINSGNMCFAN AVLQVLVYCAPFRRLFIELGKTLVSEEEQQASTPSASAIPPVTSSSSSGVTVIPNGSARSQVNGATMPKAGKSQT PFIDATVEFLKEFVVEEEGEGSNTGKKAKKNKDGFSNQISGRSGGAKGKGKEIFLDDGVEGNGDGTDGDDWPDSF LPSYVYEAMKEKKRFESMRGGQQEDAEEFLGFYLDTLEEELLSIQHSLAPSPQKTSKQQQHQPHSVEEKEELEPP VGDGWLEVGKKNRMIITRTIKAAESPITRMFGGKFKSTLKAPGQKDSVLVEDWRSLRLDVQPDSIHTIQEALTQI THPQSIQMTHPSQPGITIDANQKVLVEALPPVLVLHVKRFWYDVTVGGVVKVMKQVRFEPELEIGSDMMVPGKRS TKYRLFGAIYHHGHSASGGHYTLDILHQNRYPGAKLREGWIRIDDELVSDVRSEDVFNAWDKDEMRNAYLLFYRR IRS*
Coding	>AgabiH97|053420 ATGGGATCAATATCTGGTGGAGCTGGGGACCATGCTCCTTTGTCTCCCGCTCAATCGATATCAAGTGTTAAATCT CGCTCTCATGCAACTTCTCTTTCTGCATATACCTCTATCGCTATCTGGTCTCGTCGACCTGGTGACCCATCAAAA GCGCCTGGAATAATCATCTCTCCGCGTGCACAACCTCCAGAGGATATCATGTCAAAAGCATTAGATCTGCCCACA CCACCTGCATCACCACCAAACCCCGTGCCAGTGGCACTCCCGTCGGACGACTTCGCGCAAGAAGAAAAAAAATAC AAAACCGATTCTACTATGGCTATGTTAGCCAATTCTACCATCTCCTCGTCGGCCGTGACAGAGGTCACGGATGTG CCCACCCTACCTGGGTCACCGATGTCAACTAACACGTCTGTGTCGGGCGCCGGTGGTTCACTTACAAAGGAACAT ATTGCTTCCATCCCTGCGGTACCTGCAGTCGTAGCTACCAAAGGTGAAACTGGGTTTGGTGATACAACGACACCG GAGGCGGCCTCGTCCGTTATCGCAGAACCCGCCTCTACAGCTGCTGCGGAATCACAAGCGACCGACATCGGAACG CCATCCGCCAAACCACCAACACAAAAATCATGGGCATCTCTTTTCTCATCAGCATCTACATCTGCTACTGGAATT TCTGGAACTTCATTATCTCAACGAACTGGACTTCCCACTTCATCAGTAATCGGTTTTTCCATTCCCGCCTCAGCA ACAAACCCTTCTATATTACCTATTGTTCCAGTTATACCTGCGAAAAAAAGTGAATTACTGAATTTACTCACTAAT GGACCTGGTGGCGGTGGAATGGATAAAATTCGAACTAGGGGATTGATAAATTCTGGAAATATGTGCTTCGCAAAT GCGGTTTTGCAGGTTTTGGTATATTGTGCTCCGTTTCGAAGGTTGTTTATCGAGTTGGGGAAGACGTTGGTTTCT GAGGAAGAACAACAAGCTTCGACGCCGTCAGCTTCGGCTATTCCTCCTGTTACTAGCTCTTCATCTTCAGGTGTT ACTGTCATCCCCAATGGCTCAGCTCGTTCTCAAGTAAACGGAGCGACGATGCCGAAAGCAGGAAAGAGTCAAACA CCTTTTATAGATGCTACTGTTGAATTTCTGAAGGAATTTGTTGTGGAGGAGGAGGGAGAGGGATCTAATACTGGG AAGAAAGCGAAGAAAAATAAGGATGGTTTTAGTAATCAAATTAGCGGGAGAAGTGGAGGAGCCAAAGGGAAGGGA AAAGAAATCTTTTTGGATGACGGCGTGGAAGGTAATGGAGACGGGACAGACGGTGACGATTGGCCAGATTCGTTC TTACCTTCGTATGTTTATGAAGCTATGAAAGAGAAAAAGAGGTTTGAGAGTATGCGGGGTGGACAACAAGAAGAC GCGGAAGAGTTCCTTGGATTTTATCTTGATACGTTGGAAGAAGAATTGTTGTCAATACAACATTCCCTTGCTCCT TCCCCCCAAAAAACCTCAAAACAGCAACAACATCAACCACATTCTGTCGAGGAGAAAGAGGAATTGGAACCTCCG GTGGGGGATGGTTGGTTAGAGGTCGGTAAGAAAAATAGGATGATTATTACTCGCACCATCAAAGCCGCCGAGAGT CCAATAACGAGGATGTTTGGCGGTAAATTCAAATCGACGCTTAAGGCTCCTGGACAAAAAGATTCAGTGCTCGTG GAAGATTGGAGATCGCTTCGATTAGATGTTCAGCCCGATTCGATACATACAATTCAAGAAGCACTAACGCAAATA ACACATCCTCAATCAATACAAATGACCCATCCATCTCAACCAGGAATCACAATTGACGCTAATCAGAAAGTGTTG GTTGAAGCTTTACCTCCTGTCCTGGTTTTACATGTTAAGAGGTTTTGGTACGATGTTACCGTGGGTGGTGTTGTG AAGGTTATGAAGCAAGTGAGGTTTGAGCCGGAGTTGGAAATCGGCTCTGATATGATGGTGCCAGGAAAGAGATCG ACTAAGTATCGATTATTTGGAGCCATCTACCATCACGGACATTCCGCATCAGGCGGGCACTACACTCTCGACATC CTTCATCAAAACAGATACCCAGGAGCTAAATTACGTGAAGGATGGATAAGGATAGATGACGAATTGGTTAGTGAT GTGAGGAGTGAAGATGTTTTTAATGCTTGGGACAAGGATGAGATGAGGAATGCCTATCTGTTGTTTTATAGACGG ATACGAAGTTGA
Transcript	>AgabiH97|053420 ATGGGATCAATATCTGGTGGAGCTGGGGACCATGCTCCTTTGTCTCCCGCTCAATCGATATCAAGTGTTAAATCT CGCTCTCATGCAACTTCTCTTTCTGCATATACCTCTATCGCTATCTGGTCTCGTCGACCTGGTGACCCATCAAAA GCGCCTGGAATAATCATCTCTCCGCGTGCACAACCTCCAGAGGATATCATGTCAAAAGCATTAGATCTGCCCACA CCACCTGCATCACCACCAAACCCCGTGCCAGTGGCACTCCCGTCGGACGACTTCGCGCAAGAAGAAAAAAAATAC AAAACCGATTCTACTATGGCTATGTTAGCCAATTCTACCATCTCCTCGTCGGCCGTGACAGAGGTCACGGATGTG CCCACCCTACCTGGGTCACCGATGTCAACTAACACGTCTGTGTCGGGCGCCGGTGGTTCACTTACAAAGGAACAT ATTGCTTCCATCCCTGCGGTACCTGCAGTCGTAGCTACCAAAGGTGAAACTGGGTTTGGTGATACAACGACACCG GAGGCGGCCTCGTCCGTTATCGCAGAACCCGCCTCTACAGCTGCTGCGGAATCACAAGCGACCGACATCGGAACG CCATCCGCCAAACCACCAACACAAAAATCATGGGCATCTCTTTTCTCATCAGCATCTACATCTGCTACTGGAATT TCTGGAACTTCATTATCTCAACGAACTGGACTTCCCACTTCATCAGTAATCGGTTTTTCCATTCCCGCCTCAGCA ACAAACCCTTCTATATTACCTATTGTTCCAGTTATACCTGCGAAAAAAAGTGAATTACTGAATTTACTCACTAAT GGACCTGGTGGCGGTGGAATGGATAAAATTCGAACTAGGGGATTGATAAATTCTGGAAATATGTGCTTCGCAAAT GCGGTTTTGCAGGTTTTGGTATATTGTGCTCCGTTTCGAAGGTTGTTTATCGAGTTGGGGAAGACGTTGGTTTCT GAGGAAGAACAACAAGCTTCGACGCCGTCAGCTTCGGCTATTCCTCCTGTTACTAGCTCTTCATCTTCAGGTGTT ACTGTCATCCCCAATGGCTCAGCTCGTTCTCAAGTAAACGGAGCGACGATGCCGAAAGCAGGAAAGAGTCAAACA CCTTTTATAGATGCTACTGTTGAATTTCTGAAGGAATTTGTTGTGGAGGAGGAGGGAGAGGGATCTAATACTGGG AAGAAAGCGAAGAAAAATAAGGATGGTTTTAGTAATCAAATTAGCGGGAGAAGTGGAGGAGCCAAAGGGAAGGGA AAAGAAATCTTTTTGGATGACGGCGTGGAAGGTAATGGAGACGGGACAGACGGTGACGATTGGCCAGATTCGTTC TTACCTTCGTATGTTTATGAAGCTATGAAAGAGAAAAAGAGGTTTGAGAGTATGCGGGGTGGACAACAAGAAGAC GCGGAAGAGTTCCTTGGATTTTATCTTGATACGTTGGAAGAAGAATTGTTGTCAATACAACATTCCCTTGCTCCT TCCCCCCAAAAAACCTCAAAACAGCAACAACATCAACCACATTCTGTCGAGGAGAAAGAGGAATTGGAACCTCCG GTGGGGGATGGTTGGTTAGAGGTCGGTAAGAAAAATAGGATGATTATTACTCGCACCATCAAAGCCGCCGAGAGT CCAATAACGAGGATGTTTGGCGGTAAATTCAAATCGACGCTTAAGGCTCCTGGACAAAAAGATTCAGTGCTCGTG GAAGATTGGAGATCGCTTCGATTAGATGTTCAGCCCGATTCGATACATACAATTCAAGAAGCACTAACGCAAATA ACACATCCTCAATCAATACAAATGACCCATCCATCTCAACCAGGAATCACAATTGACGCTAATCAGAAAGTGTTG GTTGAAGCTTTACCTCCTGTCCTGGTTTTACATGTTAAGAGGTTTTGGTACGATGTTACCGTGGGTGGTGTTGTG AAGGTTATGAAGCAAGTGAGGTTTGAGCCGGAGTTGGAAATCGGCTCTGATATGATGGTGCCAGGAAAGAGATCG ACTAAGTATCGATTATTTGGAGCCATCTACCATCACGGACATTCCGCATCAGGCGGGCACTACACTCTCGACATC CTTCATCAAAACAGATACCCAGGAGCTAAATTACGTGAAGGATGGATAAGGATAGATGACGAATTGGTTAGTGAT GTGAGGAGTGAAGATGTTTTTAATGCTTGGGACAAGGATGAGATGAGGAATGCCTATCTGTTGTTTTATAGACGG ATACGAAGTTGA
Gene	>AgabiH97|053420 ATGGGATCAATATCTGGTGGAGCTGGGGACCATGCTCCTTTGTCTCCCGCTCAATCGATATCAAGTGTTAAATCT CGCTCTCATGCAACTTCTCTTTCTGCATATACCTCTATCGCTATCTGGTCTCGTCGACCTGGTGACCCATCAAAA GCGCCTGGAATAATCATCTCTCCGCGTGCACAACCTCCAGAGGATATCATGTCAAAAGCATTAGATCTGCCCACA CCACCTGCATCACCACCAAACCCCGTGCCAGTGGCACTCCCGTCGGACGACTTCGCGCAAGAAGAAAAAAAATAC AAAACCGATTCTACTATGGCTATGTTAGCCAATTCTACCATCTCCTCGTCGGCCGTGACAGAGGTCACGGATGTG CCCACCCTACCTGGGTCACCGATGTCAACTAACACGTCTGTGTCGGGCGCCGGTGGTTCACTTACAAAGGAACAT ATTGCTTCCATCCCTGCGGTACCTGCAGTCGTAGCTACCAAAGGTGAAACTGGGTTTGGTGATACAACGACACCG GAGGCGGCCTCGTCCGTTATCGCAGAACCCGCCTCTACAGCTGCTGCGGAATCACAAGCGACCGACATCGGAACG CCATCCGCCAAACCACCAACACAAAAATCATGGGCATCTCTTTTCTCATCAGCATCTACATCTGCTACTGGAATT TCTGGAACTTCATTATCTCAACGAACTGGACTTCCCACTTCATCAGTAATCGGTTTTTCCATTCCCGCCTCAGCA ACAAACCCTTCTATATTACCTATTGTTCCAGTTATACCTGCGAAAAAAAGTGAATTACTGAATTTACTCACTAAT GGACCTGGTGGCGGTGGAATGGATAAAATTCGAACTAGGGGATTGATAAATTCTGGAAATATGTGCTTCGCAAAT GCGGTTTTGCAGGTTTTGGTATATTGTGCTCCGTTTCGAAGGTTGTTTATCGAGTTGGGGAAGACGTTGGTTTCT GAGGAAGAACAACAAGCTTCGACGCCGTCAGCTTCGGCTATTCCTCCTGTTACTAGCTCTTCATCTTCAGGTGTT ACTGTCATCCCCAATGGCTCAGCTCGTTCTCAAGTAAACGGAGCGACGATGCCGAAAGCAGGAAAGAGTCAAACA CCTTTTATAGATGCTACTGTTGAATTTCTGAAGGAATTTGTTGTGGAGGAGGAGGGAGAGGGATCTAATACTGGG AAGAAAGCGAAGAAAAATAAGGATGGTTTTAGTAATCAAATTAGCGGGAGAAGTGGAGGAGCCAAAGGGAAGGGA AAAGAAATCTTTTTGGATGACGGCGTGGAAGGTAATGGAGACGGGACAGACGGTGACGATTGGCCAGATTCGTTC TTACCTTCGTATGTTTATGAAGCTATGAAAGAGAAAAAGAGGTTTGAGAGTATGCGGGTGAGTACCAACAGCCAT TGTCTCGACCACCGTCTCTTGCTTGTGCTGATCTAACAATATACACAGGGTGGACAACAAGAAGACGCGGAAGAG TTCCTTGGATTTTATCTTGATACGTTGGAAGAAGAATTGTTGTCAATACAACATTCCCTTGCTCCTTCCCCCCAA AAAACCTCAAAACAGCAACAACATCAACCACATTCTGTCGAGGAGAAAGAGGAATTGGAACCTCCGGTGGGGGAT GGTTGGTTAGAGGTCGGTAAGAAAAATAGGATGATTATTACTCGCACCGTGGGTCTCTTTTGTCTGGTTCTATTT TCAAGCATTCGGGCGTTAATGGCTGTCGTATAGATCAAAGCCGCCGAGAGTCCAATAACGAGGATGTTTGGCGGT AAATTCAAATCGACGCTTAAGGCTCCTGGACAAAAAGATTCAGTGCTCGTGGAAGATTGGAGATCGCTTCGATTA GATGTTCAGGTACGCTTACCATCACACTTCACCATCACTCACAAAAACTCTAAAACTTCATTCCAGCCCGATTCG ATACATACAATTCAAGAAGCACTAACGCAAATAACACATCCTCAATCAATACAAATGACCCATCCATCTCAACCA GGAATCACAATTGACGCTAATCAGAAAGTGTTGGTTGAAGCTTTACCTCCTGTCCTGGTTTTACATGTTAAGAGG TTTTGGTACGATGTTACCGTGGGTGGTGTTGTGAAGGTTATGAAGCAAGTGAGGTTTGAGCCGGAGTTGGAAATC GGCTCTGGTGAGTGGGCTGAATAGTTATGCGATAATCGTTTTTTGAACTCATTTCTTATTTTTTGAAGATATGAT GGTGCCAGGAAAGAGATCGACTAAGTATCGATTATTTGGAGGTACGGGCCCCGTCTTTAGAAACTCATCTCTCCC TCACATCATCGTTTTCTTTTCTCGCTTACATAGCCATCTACCATCACGGACATTCCGCATCAGGCGGGCACTACA CTCTCGACATCCTTCATCAAAACAGATACCCAGGAGCTAAATTACGTGAAGGATGGATAAGGATAGATGACGAAT TGGTTAGTGATGTGAGGAGTGAAGATGTTTTTAATGCTTGGGACAAGGATGAGATGAGGAATGCCTATCTGTTGT TTTATAGACGGATACGAAGTTGA