Fungal Genomics

at Utrecht University

General Properties

Protein ID	AgabiH97\|053090
Gene name
Location	scaffold_3:118776..119823
Strand	+
Gene length (bp)	1047
Transcript length (bp)	876
Coding sequence length (bp)	876
Protein length (aa)	292

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF00651	BTB	BTB/POZ domain	1.0E-09	27	118

Swissprot hits

(None)

GO

GO Term	Description	Terminal node
GO:0005515	protein binding	Yes
GO:0005488	binding	No
GO:0003674	molecular_function	No

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 70	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Developmental stages of Agaricus bisporus (strain A15). Published in Pelkmans et al, Applied Microbiology and Biotechnology, 2016

Click here for more information

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>AgabiH97\|053090 MDSSPSTENPVPVRDELFYFDDDPMATFLVENRLFKIHRHFFIQGSIIFRDLFAQTGGPDDPVMRTDKESDEKTI PLPDVTAKEFRTLLRFFYAMSLPSMSANKDTVIELLSFNQEDKLALLSIAHRFVFDEIFNYISQRVEHMEIPVVE RIRLGDKYDLTPWLTSAYKEILDRTSLESNMRQEEIDVLGLDRVVKIFLAKTFMLRESLDGVQEAPRVHATSCSL CRNCSHWKRSFGSRRQAIHLVGLTPTADVVEKYFFSSCSRTMSPPRSRAVSVIGESLDASYDDDAF*
Coding	>AgabiH97\|053090 ATGGATTCTTCACCTTCAACTGAAAATCCCGTTCCTGTACGTGATGAATTATTCTACTTTGACGATGACCCTATG GCAACATTCCTCGTTGAAAATCGGCTCTTCAAAATCCATCGTCATTTTTTCATCCAAGGATCTATAATCTTTCGG GACTTGTTTGCCCAGACCGGAGGCCCAGATGACCCAGTAATGAGAACTGATAAGGAGTCCGACGAGAAAACCATT CCGCTACCGGATGTAACTGCAAAGGAATTCAGGACGCTGTTGCGTTTCTTCTACGCAATGTCGTTACCTTCTATG TCCGCCAACAAAGACACAGTCATTGAACTTCTCTCGTTTAATCAGGAAGACAAGCTCGCTCTCCTCAGCATCGCC CACCGATTTGTCTTTGACGAGATCTTCAATTATATCAGTCAACGAGTCGAGCATATGGAAATTCCAGTGGTGGAG CGGATCCGCCTTGGCGACAAATATGATCTGACCCCTTGGCTCACCTCTGCGTATAAAGAAATTCTTGATCGTACT TCACTAGAAAGTAATATGCGGCAGGAAGAGATTGATGTATTAGGTTTGGATAGGGTCGTCAAAATTTTCTTAGCC AAGACTTTCATGTTGAGAGAGAGTCTAGATGGAGTACAAGAAGCACCGAGAGTCCATGCGACCTCGTGCAGTCTG TGCAGAAACTGTTCCCACTGGAAGCGCAGTTTCGGCAGTCGTAGGCAAGCTATTCATCTTGTTGGGCTAACACCT ACGGCGGATGTGGTGGAAAAGTACTTTTTTTCTTCTTGTTCGAGGACGATGAGTCCACCGAGAAGTAGAGCAGTT TCGGTTATAGGGGAATCATTGGACGCCTCATATGATGATGATGCCTTTTAA
Transcript	>AgabiH97\|053090 ATGGATTCTTCACCTTCAACTGAAAATCCCGTTCCTGTACGTGATGAATTATTCTACTTTGACGATGACCCTATG GCAACATTCCTCGTTGAAAATCGGCTCTTCAAAATCCATCGTCATTTTTTCATCCAAGGATCTATAATCTTTCGG GACTTGTTTGCCCAGACCGGAGGCCCAGATGACCCAGTAATGAGAACTGATAAGGAGTCCGACGAGAAAACCATT CCGCTACCGGATGTAACTGCAAAGGAATTCAGGACGCTGTTGCGTTTCTTCTACGCAATGTCGTTACCTTCTATG TCCGCCAACAAAGACACAGTCATTGAACTTCTCTCGTTTAATCAGGAAGACAAGCTCGCTCTCCTCAGCATCGCC CACCGATTTGTCTTTGACGAGATCTTCAATTATATCAGTCAACGAGTCGAGCATATGGAAATTCCAGTGGTGGAG CGGATCCGCCTTGGCGACAAATATGATCTGACCCCTTGGCTCACCTCTGCGTATAAAGAAATTCTTGATCGTACT TCACTAGAAAGTAATATGCGGCAGGAAGAGATTGATGTATTAGGTTTGGATAGGGTCGTCAAAATTTTCTTAGCC AAGACTTTCATGTTGAGAGAGAGTCTAGATGGAGTACAAGAAGCACCGAGAGTCCATGCGACCTCGTGCAGTCTG TGCAGAAACTGTTCCCACTGGAAGCGCAGTTTCGGCAGTCGTAGGCAAGCTATTCATCTTGTTGGGCTAACACCT ACGGCGGATGTGGTGGAAAAGTACTTTTTTTCTTCTTGTTCGAGGACGATGAGTCCACCGAGAAGTAGAGCAGTT TCGGTTATAGGGGAATCATTGGACGCCTCATATGATGATGATGCCTTTTAA
Gene	>AgabiH97\|053090 ATGGATTCTTCACCTTCGTGAGCCAAGTTTGTGGACGAAAAAAAGAAACAAAAATCTAACATTTCTGTTTGAGAA CTGAAAATCCCGTTCCTGTACGTGATGAATTATTCTACTTTGACGATGACCCTATGGCAACATTCCTCGTGAGTT GTGGCGATCCAAATAATTTGCGAGGAAGCTAACACATGCCAATCGTCATAGGTTGAAAATCGGCTCTTCAAAATC CATCGTCATTTTTTCATCCAAGGATCTATAATCTTTCGGGACTTGTTTGCCCAGACCGGAGGCCCAGATGACCCA GTAATGAGAACTGATAAGGAGTCCGACGAGAAAACCATTCCGCTACCGGATGTAACTGCAAAGGAATTCAGGACG CTGTTGCGTTTCTTCTACGCAATGTAAATATTTTGATTTTTCCAAACATCGCAGAACACCACCTCACTTCTTTCT AATAGGTCGTTACCTTCTATGTCCGCCAACAAAGACACAGTCATTGAACTTCTCTCGTTTAATCAGGAAGACAAG CTCGCTCTCCTCAGCATCGCCCACCGATTTGTCTTTGACGAGATCTTCAATTATATCAGTCAACGAGTCGAGCAT ATGGAAATTCCAGTGGTGGAGCGGATCCGCCTTGGCGACAAATATGATCTGACCCCTTGGCTCACCTCTGCGTAT AAAGAAATTCTTGATCGTACTTCACTAGAAAGTAATATGCGGCAGGAAGAGATTGATGTATTAGGTTTGGATAGG GTCGTCAAAATTTTCTTAGCCAAGACTTTCATGTTGAGAGAGAGTCTAGATGGAGTACAAGAAGCACCGAGAGTC CATGCGACCTCGTGCAGTCTGTGCAGAAACTGTTCCCACTGGAAGCGCAGTTTCGGCAGTCGTAGGCAAGCTATT CATCTTGTTGGGCTAACACCTACGGCGGATGTGGTGGAAAAGTACTTTTTTTCTTCTTGTTCGAGGACGATGAGT CCACCGAGAAGTAGAGCAGTTTCGGTTATAGGGGAATCATTGGACGCCTCATATGATGATGATGCCTTTTAA

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