© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | AgabiH97|053010 |
| Gene name | |
| Location | scaffold_3:96467..99025 |
| Strand | + |
| Gene length (bp) | 2558 |
| Transcript length (bp) | 1485 |
| Coding sequence length (bp) | 1485 |
| Protein length (aa) | 495 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF07690 | MFS_1 | Major Facilitator Superfamily | 1.2E-31 | 67 | 432 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q10097|YAOI_SCHPO | Uncharacterized transporter C11D3.18C OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC11D3.18c PE=3 SV=1 | 1 | 494 | 9.0E-84 |
| sp|Q9US44|YIZG_SCHPO | Uncharacterized transporter C1002.16c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1002.16c PE=3 SV=1 | 46 | 455 | 5.0E-77 |
| sp|P53322|TNA1_YEAST | High-affinity nicotinic acid transporter OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TNA1 PE=1 SV=1 | 11 | 492 | 4.0E-72 |
| sp|Q9P6J0|YHDC_SCHPO | Uncharacterized transporter C1683.12 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC1683.12 PE=3 SV=1 | 49 | 494 | 6.0E-70 |
| sp|Q9US37|YFZ4_SCHPO | Uncharacterized transporter C1039.04 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1039.04 PE=3 SV=1 | 32 | 494 | 4.0E-67 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q10097|YAOI_SCHPO | Uncharacterized transporter C11D3.18C OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC11D3.18c PE=3 SV=1 | 1 | 494 | 9.0E-84 |
| sp|Q9US44|YIZG_SCHPO | Uncharacterized transporter C1002.16c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1002.16c PE=3 SV=1 | 46 | 455 | 5.0E-77 |
| sp|P53322|TNA1_YEAST | High-affinity nicotinic acid transporter OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TNA1 PE=1 SV=1 | 11 | 492 | 4.0E-72 |
| sp|Q9P6J0|YHDC_SCHPO | Uncharacterized transporter C1683.12 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC1683.12 PE=3 SV=1 | 49 | 494 | 6.0E-70 |
| sp|Q9US37|YFZ4_SCHPO | Uncharacterized transporter C1039.04 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1039.04 PE=3 SV=1 | 32 | 494 | 4.0E-67 |
| sp|Q44470|TUB4_AGRVI | Putative tartrate transporter OS=Agrobacterium vitis GN=ttuB PE=2 SV=1 | 46 | 371 | 5.0E-49 |
| sp|P70786|TUB3_AGRVI | Putative tartrate transporter OS=Agrobacterium vitis GN=ttuB PE=2 SV=1 | 46 | 356 | 3.0E-47 |
| sp|P76470|RHMT_ECOLI | Inner membrane transport protein RhmT OS=Escherichia coli (strain K12) GN=rhmT PE=1 SV=2 | 53 | 375 | 8.0E-43 |
| sp|P40445|YIQ6_YEAST | Uncharacterized transporter YIL166C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YIL166C PE=1 SV=1 | 34 | 452 | 3.0E-41 |
| sp|O94491|YC7A_SCHPO | Uncharacterized transporter C417.10 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC417.10 PE=3 SV=1 | 45 | 494 | 3.0E-40 |
| sp|O94572|YGDF_SCHPO | Uncharacterized transporter C1773.15 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC1773.15 PE=3 SV=1 | 12 | 494 | 4.0E-39 |
| sp|P15365|DAL5_YEAST | Allantoate permease OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=DAL5 PE=1 SV=1 | 45 | 494 | 5.0E-37 |
| sp|Q88FY6|NICT_PSEPK | Putative metabolite transport protein NicT OS=Pseudomonas putida (strain KT2440) GN=nicT PE=2 SV=1 | 51 | 355 | 2.0E-36 |
| sp|O74923|YJ7D_SCHPO | Uncharacterized transporter C757.13 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC757.13 PE=3 SV=1 | 47 | 492 | 3.0E-31 |
| sp|Q07904|THI73_YEAST | Thiamine pathway transporter THI73 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=THI73 PE=1 SV=1 | 16 | 492 | 2.0E-29 |
| sp|O43000|LIZ1_SCHPO | Pantothenate transporter liz1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=liz1 PE=2 SV=2 | 51 | 447 | 5.0E-28 |
| sp|O13880|VHT1_SCHPO | Vitamin H transporter 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=vht1 PE=2 SV=1 | 30 | 433 | 9.0E-25 |
| sp|Q05181|PHT1_PSEPU | Phthalate transporter OS=Pseudomonas putida GN=pht1 PE=3 SV=1 | 35 | 390 | 1.0E-23 |
| sp|Q9C0V8|YHJ1_SCHPO | Uncharacterized transporter PB10D8.01 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBPB10D8.01 PE=3 SV=1 | 46 | 475 | 5.0E-23 |
| sp|B5BP49|YP55_SCHPO | Uncharacterized transporter C460.05 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC460.05 PE=3 SV=1 | 2 | 474 | 9.0E-22 |
| sp|P39709|SEO1_YEAST | Probable transporter SEO1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SEO1 PE=1 SV=1 | 47 | 447 | 1.0E-21 |
| sp|O13879|YE1F_SCHPO | Uncharacterized transporter C1B3.15C OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1B3.15c PE=3 SV=1 | 39 | 474 | 4.0E-21 |
| sp|P25621|FEN2_YEAST | Pantothenate transporter FEN2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=FEN2 PE=1 SV=1 | 48 | 282 | 3.0E-20 |
| sp|Q9C0U9|YQD3_SCHPO | Uncharacterized transporter PB1C11.03 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCPB1C11.03 PE=1 SV=1 | 46 | 294 | 3.0E-20 |
| sp|Q12235|YCT1_YEAST | High affinity cysteine transporter OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YCT1 PE=1 SV=1 | 44 | 453 | 5.0E-16 |
| sp|P53241|VHT1_YEAST | Vitamin H transporter OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=VHT1 PE=1 SV=1 | 40 | 453 | 1.0E-15 |
| sp|Q0K843|SAUU_CUPNH | Probable sulfoacetate transporter SauU OS=Cupriavidus necator (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=sauU PE=2 SV=1 | 56 | 356 | 5.0E-14 |
| sp|P0CF20|YO163_YEAST | Putative uncharacterized transporter YOL163W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YOL163W PE=5 SV=1 | 137 | 292 | 2.0E-12 |
| sp|P39398|LGOT_ECOLI | Probable L-galactonate transporter OS=Escherichia coli (strain K12) GN=lgoT PE=1 SV=2 | 37 | 237 | 3.0E-08 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0055085 | transmembrane transport | Yes |
| GO:0022857 | transmembrane transporter activity | Yes |
| GO:0051179 | localization | No |
| GO:0003674 | molecular_function | No |
| GO:0051234 | establishment of localization | No |
| GO:0008150 | biological_process | No |
| GO:0009987 | cellular process | No |
| GO:0005215 | transporter activity | No |
| GO:0006810 | transport | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 53 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 100 | 122 | 22 |
| 2 | 129 | 146 | 17 |
| 3 | 156 | 178 | 22 |
| 4 | 190 | 212 | 22 |
| 5 | 222 | 244 | 22 |
| 6 | 295 | 317 | 22 |
| 7 | 327 | 349 | 22 |
| 8 | 356 | 378 | 22 |
| 9 | 383 | 405 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >AgabiH97|053010 MSGDPPTSPVNEKRKPESHLETASSGEKSDVIDFGGESSLPPPPKLTAEEERALWRRVDLRLMPILSCMYLASFI DRGNIGNAKLQGLITELGLTGNQYNIALTMYFIPYCIFECPANLVLKRFRPSKWLPGITCVWGIVMTLMGLVKNY PQLVGVRILLGVAEAGLFPGVVYYLSIWYPRHMLQYRIGLFFGAASLAGAFSGLLAYAISFMSGVGGKLGWSWIF ILEGLATIVIGLIAFFILVDFPLTASFLTPEERSFVIWRKKYDNSSVGEEEHFAVRHFVQAVSDWQVWLHILIYI SVIGPLYGITLFLPTIINSFGYSPAISQLLTVPPYVAATIVLYIWAVYSDKIKMRSPFVYAGLVLCMIGFAINIS TAPNGVKYFGTFFVVIGSYAAFPGVVAWLGNNLAGQYKRGIGMALHIGIGNFSGVFASNIYRSQDSPRFIIGHAV ELMRINKKRDEFQRLALENGEKEKYTPQQLREMGDRAPDFRYTL* |
| Coding | >AgabiH97|053010 ATGTCTGGCGACCCACCGACTTCCCCCGTGAATGAAAAACGGAAACCTGAGTCGCACCTTGAGACCGCAAGTTCC GGTGAGAAATCCGATGTTATCGATTTCGGAGGAGAGTCCTCTCTTCCCCCACCCCCTAAACTCACGGCCGAGGAG GAGAGAGCACTATGGAGGCGAGTAGATTTAAGATTGATGCCAATCCTCTCCTGCATGTATCTCGCATCCTTTATC GACAGAGGGAATATTGGAAATGCTAAGCTGCAGGGTTTGATAACGGAGTTGGGCTTGACGGGCAACCAATACAAT ATCGCCTTAACGATGTACTTTATTCCGTACTGTATTTTTGAGTGCCCCGCAAATCTTGTATTGAAGCGATTTAGA CCATCGAAATGGTTACCAGGGATTACATGTGTGTGGGGCATCGTAATGACGTTGATGGGTTTAGTTAAAAACTAT CCACAACTTGTGGGGGTTCGCATTTTACTTGGGGTCGCCGAAGCTGGTTTATTCCCTGGCGTTGTATATTACTTG TCAATATGGTATCCTCGCCACATGCTCCAGTACCGGATTGGTCTATTCTTTGGTGCTGCATCTTTGGCGGGTGCA TTTTCGGGATTATTGGCCTATGCTATCAGTTTCATGTCCGGAGTGGGTGGAAAACTGGGATGGTCTTGGATATTC ATTCTTGAAGGACTCGCAACTATTGTCATTGGCTTGATTGCTTTCTTTATACTAGTAGATTTTCCACTTACAGCA AGTTTCCTGACACCTGAAGAACGCTCTTTCGTGATCTGGCGTAAAAAGTACGACAATTCTTCCGTTGGTGAGGAA GAACACTTCGCGGTACGGCATTTTGTGCAAGCCGTGTCAGATTGGCAAGTATGGCTGCATATTTTAATATACATC TCAGTCATTGGACCCCTCTATGGCATTACTTTGTTCCTTCCAACTATCATCAATTCTTTTGGATATTCTCCTGCT ATTAGTCAGTTGCTCACCGTTCCTCCATATGTTGCTGCGACCATTGTACTGTATATATGGGCCGTTTATTCCGAC AAAATCAAAATGCGCTCGCCTTTCGTTTATGCAGGACTGGTCCTCTGCATGATCGGGTTTGCGATCAACATATCG ACCGCTCCTAATGGCGTCAAGTACTTCGGGACATTTTTTGTTGTAATCGGCAGTTATGCAGCTTTTCCGGGAGTA GTCGCATGGCTTGGAAATAACCTAGCTGGGCAATACAAACGCGGAATTGGCATGGCATTACACATCGGGATCGGA AACTTCAGCGGTGTATTCGCATCTAACATTTATCGTTCCCAAGACAGCCCTAGGTTCATAATCGGTCATGCGGTT GAACTGATGCGAATCAACAAAAAGCGTGACGAGTTCCAGCGACTTGCGTTGGAAAACGGCGAAAAAGAGAAATAT ACGCCTCAGCAACTTCGTGAAATGGGAGATCGCGCCCCAGACTTCAGATACACCTTATAG |
| Transcript | >AgabiH97|053010 ATGTCTGGCGACCCACCGACTTCCCCCGTGAATGAAAAACGGAAACCTGAGTCGCACCTTGAGACCGCAAGTTCC GGTGAGAAATCCGATGTTATCGATTTCGGAGGAGAGTCCTCTCTTCCCCCACCCCCTAAACTCACGGCCGAGGAG GAGAGAGCACTATGGAGGCGAGTAGATTTAAGATTGATGCCAATCCTCTCCTGCATGTATCTCGCATCCTTTATC GACAGAGGGAATATTGGAAATGCTAAGCTGCAGGGTTTGATAACGGAGTTGGGCTTGACGGGCAACCAATACAAT ATCGCCTTAACGATGTACTTTATTCCGTACTGTATTTTTGAGTGCCCCGCAAATCTTGTATTGAAGCGATTTAGA CCATCGAAATGGTTACCAGGGATTACATGTGTGTGGGGCATCGTAATGACGTTGATGGGTTTAGTTAAAAACTAT CCACAACTTGTGGGGGTTCGCATTTTACTTGGGGTCGCCGAAGCTGGTTTATTCCCTGGCGTTGTATATTACTTG TCAATATGGTATCCTCGCCACATGCTCCAGTACCGGATTGGTCTATTCTTTGGTGCTGCATCTTTGGCGGGTGCA TTTTCGGGATTATTGGCCTATGCTATCAGTTTCATGTCCGGAGTGGGTGGAAAACTGGGATGGTCTTGGATATTC ATTCTTGAAGGACTCGCAACTATTGTCATTGGCTTGATTGCTTTCTTTATACTAGTAGATTTTCCACTTACAGCA AGTTTCCTGACACCTGAAGAACGCTCTTTCGTGATCTGGCGTAAAAAGTACGACAATTCTTCCGTTGGTGAGGAA GAACACTTCGCGGTACGGCATTTTGTGCAAGCCGTGTCAGATTGGCAAGTATGGCTGCATATTTTAATATACATC TCAGTCATTGGACCCCTCTATGGCATTACTTTGTTCCTTCCAACTATCATCAATTCTTTTGGATATTCTCCTGCT ATTAGTCAGTTGCTCACCGTTCCTCCATATGTTGCTGCGACCATTGTACTGTATATATGGGCCGTTTATTCCGAC AAAATCAAAATGCGCTCGCCTTTCGTTTATGCAGGACTGGTCCTCTGCATGATCGGGTTTGCGATCAACATATCG ACCGCTCCTAATGGCGTCAAGTACTTCGGGACATTTTTTGTTGTAATCGGCAGTTATGCAGCTTTTCCGGGAGTA GTCGCATGGCTTGGAAATAACCTAGCTGGGCAATACAAACGCGGAATTGGCATGGCATTACACATCGGGATCGGA AACTTCAGCGGTGTATTCGCATCTAACATTTATCGTTCCCAAGACAGCCCTAGGTTCATAATCGGTCATGCGGTT GAACTGATGCGAATCAACAAAAAGCGTGACGAGTTCCAGCGACTTGCGTTGGAAAACGGCGAAAAAGAGAAATAT ACGCCTCAGCAACTTCGTGAAATGGGAGATCGCGCCCCAGACTTCAGATACACCTTATAG |
| Gene | >AgabiH97|053010 ATGTCTGGCGACCCACCGACTTCCCCCGTGAATGAAAAACGGAAACCTGAGTCGCACCTTGAGACCGCAAGTTCC GGTGAGAAATCCGATGTTATCGATTTCGGAGGAGAGTCCTCTCTTCCCCCACCCCCTAAACTCACGGCCGAGGAG GAGAGAGCACTATGGAGGCGAGTAGATTTAAGATTGATGCCAATCCTCTCCTGCATGTATCTCGCATCCTTTATC GACAGAGGTAAGCTATTGTTTGAACAACCACTAGGATTTTTGACTTACAGTCTTGTCCCCAGGGAATATTGGTAC GTTTGATCCTGATTTTTGAGACGGGAGGAATAATTGGCGTTCAGGAAATGCTAAGCTGCAGGGTTTGATAACGGA GTTGGGCTTGACGGGCAACCAATACAATATCGCCTTAGTACGTCCCCATGATACTTGAAGCACGAGCGCAAAGTG ATTGATATGGTATAGACGATGTACTTTATTGTAAGTGCGTCGCTCAATCTAGACTTTCGATATTAGTCTTAGATT TTATGAGCCGTACTGTATTTTTGAGTGCCCCGCAAAGTGAGTATCCAGATTTGGATGTTTAGATTCGTTCTTCTT ATGCTTCTATGCACACAGTCTTGTATTGAAGCGATTTAGACCATCGAAGTGAGTGGTAATGAGTGCTTCATGTTG CAGATGATGATAACGGCCTTAAAAGATGGTTACCAGGGATTACAGTGAGTAAGCTCAAATTTGCAGATCCGTTTT TCTTGCTGACTGGACCAGTGTGTGTGGGGCATCGTAATGTGCGTTAGGAGCTCTCGTCCGTCTTTGCGCTACCAA GAAACTGAAATTAATGTCCAGGACGTTGATGGGTTTAGTTAAAAAGTGATTTTCCGTGTTAAGCTCTTTTCGATT TCTGGACTGCAACTAATCTTCTTTTAGCTATCCACAACTTGTGGGGGTTCGCATTTTACTTGGGGTCGCCGAAGC TGGTTTATTCCCTGGCGTTGTATATTAGTTAGTGAAGCAACTTTGGTCCCGGATCCTATCTATTAACATGGTGCC CCTTAGCTTGTCAATATGGTATCCTCGCCACATGCTCCAGTACCGGATTGGTCTATTCTTTGGTGCTGCATCTTT GGCGGGTGCATTTTCGGGATTATTGGCCTATGCTATCAGTTTCATGTCCGGAGTGGGTGGAAAACTGGGATGGTC TTGGATATTCGTGCGTGTTATCGCATAAACTCTGAGGATTGAATGATAATCGAAGCCTCAGATTCTTGAAGGACT CGCAACTATTGTCATTGGCTTGATTGCTTTCTTTAGTAAGCTACCCACCCAATGGCTATAAATGATTAACCTGGT GCTGATCATGGGTTCGCTATCCAGTACTAGTAGATTTTCCACTTACAGCAAGTTTCCTGACACCTGAAGAACGCT CTTTCGTGATCTGGCGTAAAAGTGAGTCCAGAAATTCTACCTTGATGCCCACTAAGGCTGACCTGGTTATTCGAG AGTACGACAATTCTTCCGTTGGTGAGGAAGAACACTTCGCGGTACGGCATTTTGTGCAAGCCGTGTCAGATTGGC AAGTATGGCTGCATATTTTAATATACATCTCAGTCATTGGACCCCGTACGTATCTCATGCTCCGATACGCACTCC ATATGCTCACTTATCCAGTCTATGGCATTACTTTGTTCCTTCCGTGAGTCCCAGCATCAAACAATTATAAACTTG GGGGCTGAATCGCGTTCTTCCTTAGAACTATCATCAATTCGTAAGTAACGCCGTACCTATCCCAAGCTTCTTCAT TGCTAAGGGCATTATAGTTTTGGATATTCTCCTGCTATTAGTCAGTTGCTCACCGTTCCTCCATATGTTGCTGCG AGTAAGTACGAAACAAATTTCATCAGTGAGAAGTGCGCTCATAACCCAAGCCATTGTACTGTATATATGGGCCGT TTATTCCGACAAAATCAAAATGCGCTCGCCTTTCGTTTATGCAGGACTGGTCCTCTGCATGATCGGGTTTGCGAT CAACATATCGACCGCTCCTAATGGCGTCAAGTACTTCGGGACATTTTTTGTTGTAATCGGCAGTTATGCAGCTTT TCCGGGAGTAGTCGCATGGTGAGCCCTTTCGCTTCACTTCTCGAGGAGTATTTGATTTAATGAATATACTCGAGG CTTGGAAATAACCTAGCTGGGCAATACAAACGCGGAATTGGCATGGCATTACACATCGGGATCGGAAACTTCAGC GGTGTATTCGCATCTAACATTTATCGTTCCCAAGACAGCCCTAGGTTCATAATCGGTCGTAAGTAACACACGATC CATCCCTCAATCTTCATTAGATTCATGATGGAATAACAGATGCGGTTGAACTGATGTTCGTCGGGATCGGGTTTA TCTGTGTGCCAATTGCGGTTATCACATACAGGCGAATCAACAAAAAGCGTGACGAGTTCCAGCGACTTGCGTTGG AAAACGGCGAAAAAGAGAAATATACGCCTCAGCAACTTCGTGAAATGGGAGATCGCGCCCCAGACTTCAGATACA CCTTATAG |