Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabiH97|052660
Gene name
Locationscaffold_3:12721..13294
Strand+
Gene length (bp)573
Transcript length (bp)408
Coding sequence length (bp)408
Protein length (aa) 136

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF13374 TPR_10 Tetratricopeptide repeat 4.0E-09 55 94
PF13374 TPR_10 Tetratricopeptide repeat 1.6E-08 95 132
PF13424 TPR_12 Tetratricopeptide repeat 1.2E-12 55 118

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|Q05090|KLC_STRPU Kinesin light chain OS=Strongylocentrotus purpuratus PE=2 SV=1 56 133 1.0E-06
sp|Q5PQM2|KLC4_RAT Kinesin light chain 4 OS=Rattus norvegicus GN=Klc4 PE=1 SV=1 56 133 1.0E-06
sp|Q9DBS5|KLC4_MOUSE Kinesin light chain 4 OS=Mus musculus GN=Klc4 PE=1 SV=1 56 133 1.0E-06
sp|Q5R581|KLC1_PONAB Kinesin light chain 1 OS=Pongo abelii GN=KLC1 PE=2 SV=3 56 133 2.0E-06
sp|P46822|KLC_CAEEL Kinesin light chain OS=Caenorhabditis elegans GN=klc-2 PE=2 SV=2 56 133 2.0E-06
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Swissprot ID Swissprot Description Start End E-value
sp|Q05090|KLC_STRPU Kinesin light chain OS=Strongylocentrotus purpuratus PE=2 SV=1 56 133 1.0E-06
sp|Q5PQM2|KLC4_RAT Kinesin light chain 4 OS=Rattus norvegicus GN=Klc4 PE=1 SV=1 56 133 1.0E-06
sp|Q9DBS5|KLC4_MOUSE Kinesin light chain 4 OS=Mus musculus GN=Klc4 PE=1 SV=1 56 133 1.0E-06
sp|Q5R581|KLC1_PONAB Kinesin light chain 1 OS=Pongo abelii GN=KLC1 PE=2 SV=3 56 133 2.0E-06
sp|P46822|KLC_CAEEL Kinesin light chain OS=Caenorhabditis elegans GN=klc-2 PE=2 SV=2 56 133 2.0E-06
sp|Q07866|KLC1_HUMAN Kinesin light chain 1 OS=Homo sapiens GN=KLC1 PE=1 SV=2 56 133 2.0E-06
sp|Q91W40|KLC3_MOUSE Kinesin light chain 3 OS=Mus musculus GN=Klc3 PE=1 SV=1 56 133 2.0E-06
sp|O88447|KLC1_MOUSE Kinesin light chain 1 OS=Mus musculus GN=Klc1 PE=1 SV=3 56 133 2.0E-06
sp|O88447|KLC1_MOUSE Kinesin light chain 1 OS=Mus musculus GN=Klc1 PE=1 SV=3 53 116 2.0E-06
sp|Q68G30|KLC3_RAT Kinesin light chain 3 OS=Rattus norvegicus GN=Klc3 PE=1 SV=1 56 133 2.0E-06
sp|P37285|KLC1_RAT Kinesin light chain 1 OS=Rattus norvegicus GN=Klc1 PE=1 SV=2 56 133 2.0E-06
sp|Q05090|KLC_STRPU Kinesin light chain OS=Strongylocentrotus purpuratus PE=2 SV=1 53 116 3.0E-06
sp|Q6P597|KLC3_HUMAN Kinesin light chain 3 OS=Homo sapiens GN=KLC3 PE=1 SV=2 56 133 3.0E-06
sp|Q9H0B6|KLC2_HUMAN Kinesin light chain 2 OS=Homo sapiens GN=KLC2 PE=1 SV=1 56 130 3.0E-06
sp|Q5R8E2|KLC3_PONAB Kinesin light chain 3 OS=Pongo abelii GN=KLC3 PE=2 SV=1 56 133 3.0E-06
sp|Q2TBQ9|KLC3_BOVIN Kinesin light chain 3 OS=Bos taurus GN=KLC3 PE=2 SV=1 56 133 3.0E-06
sp|P37285|KLC1_RAT Kinesin light chain 1 OS=Rattus norvegicus GN=Klc1 PE=1 SV=2 53 116 3.0E-06
sp|Q07866|KLC1_HUMAN Kinesin light chain 1 OS=Homo sapiens GN=KLC1 PE=1 SV=2 53 116 3.0E-06
sp|Q5R581|KLC1_PONAB Kinesin light chain 1 OS=Pongo abelii GN=KLC1 PE=2 SV=3 53 116 3.0E-06
sp|P46822|KLC_CAEEL Kinesin light chain OS=Caenorhabditis elegans GN=klc-2 PE=2 SV=2 53 117 4.0E-06
sp|P46824|KLC_DROME Kinesin light chain OS=Drosophila melanogaster GN=Klc PE=1 SV=1 33 117 4.0E-06
sp|Q9NSK0|KLC4_HUMAN Kinesin light chain 4 OS=Homo sapiens GN=KLC4 PE=1 SV=3 56 133 4.0E-06
sp|P46824|KLC_DROME Kinesin light chain OS=Drosophila melanogaster GN=Klc PE=1 SV=1 56 133 7.0E-06
sp|O88448|KLC2_MOUSE Kinesin light chain 2 OS=Mus musculus GN=Klc2 PE=1 SV=1 56 130 8.0E-06
sp|P46825|KLC_DORPE Kinesin light chain OS=Doryteuthis pealeii PE=2 SV=1 56 118 9.0E-06
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GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Cytoplasm 0.4652 0.4353 0.2451 0.1115 0.249 0.0762 0.2962 0.3868 0.2278 0.1958

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

Analysis 1: Developmental stages of Agaricus bisporus (strain A15). Published in Pelkmans et al, Applied Microbiology and Biotechnology, 2016

Click here for more information

Orthologs

Orthofinder run ID1
Orthogroup9663
Change Orthofinder run
Species Protein ID
Agaricus bisporus var bisporus H39 AgabiH39|277700
Agaricus bisporus var bisporus H39 AgabiH39|447200
Agaricus bisporus var bisporus H97 AgabiH97|052660 (this protein)
Agaricus bisporus var bisporus H97 AgabiH97|109710

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >AgabiH97|052660
MPSGTRNSRSRSTFGAFPCESLEGPPLRLLALDGGGIRGLSELLVLKEVMHQLMGVLSGLALVYSEQGQWKEAEA
LQVMVMEKRKRLLGDDQPHTLTSMGNLALTYWNLGQRKEAEELEVVMEKRQQLSGDDYDC*
Coding >AgabiH97|052660
ATGCCATCTGGCACAAGGAACTCGCGATCCCGATCAACGTTCGGGGCCTTTCCGTGTGAAAGTTTAGAAGGGCCG
CCCTTGAGGCTGCTTGCGCTAGATGGCGGTGGGATCCGTGGACTTTCAGAACTACTCGTCCTCAAAGAAGTTATG
CACCAGCTGATGGGGGTCTTGAGTGGTTTGGCACTTGTGTATTCCGAACAGGGGCAGTGGAAGGAAGCAGAGGCG
CTTCAAGTGATGGTGATGGAGAAGAGGAAGCGGCTGCTCGGTGATGATCAACCTCACACACTCACGAGCATGGGC
AATCTTGCGCTCACGTACTGGAACCTGGGGCAGCGGAAGGAAGCAGAGGAGCTTGAGGTGGTGATGGAGAAGAGG
CAGCAGCTGTCTGGTGATGATTATGATTGTTGA
Transcript >AgabiH97|052660
ATGCCATCTGGCACAAGGAACTCGCGATCCCGATCAACGTTCGGGGCCTTTCCGTGTGAAAGTTTAGAAGGGCCG
CCCTTGAGGCTGCTTGCGCTAGATGGCGGTGGGATCCGTGGACTTTCAGAACTACTCGTCCTCAAAGAAGTTATG
CACCAGCTGATGGGGGTCTTGAGTGGTTTGGCACTTGTGTATTCCGAACAGGGGCAGTGGAAGGAAGCAGAGGCG
CTTCAAGTGATGGTGATGGAGAAGAGGAAGCGGCTGCTCGGTGATGATCAACCTCACACACTCACGAGCATGGGC
AATCTTGCGCTCACGTACTGGAACCTGGGGCAGCGGAAGGAAGCAGAGGAGCTTGAGGTGGTGATGGAGAAGAGG
CAGCAGCTGTCTGGTGATGATTATGATTGTTGA
Gene >AgabiH97|052660
ATGCCATCTGGCACAAGGAACTCGCGATCCCGATCAACGTTCGGGGTCCCCTTTCGCTTTTTAATAACCAGTTGT
AGCAAACAGTACTAGGCCTTTCCGTGTGAAAGTTTAGGTGCGTGCATGCAGCATGTCATATGTCACAGCCTCATC
CTTGGTCTTAACGATGACTTCGCCTGCAGAAGGGCCGCCCTTGAGGCTGCTTGCGCTAGGTATATACGTCCTCTC
TCACCGATAGAGTCGCTGACTAGTAAACCCTGAACAGATGGCGGTGGGATCCGTGGACTTTCAGAACTACTCGTC
CTCAAAGAAGTTATGCACCAGCTGATGGGGGTCTTGAGTGGTTTGGCACTTGTGTATTCCGAACAGGGGCAGTGG
AAGGAAGCAGAGGCGCTTCAAGTGATGGTGATGGAGAAGAGGAAGCGGCTGCTCGGTGATGATCAACCTCACACA
CTCACGAGCATGGGCAATCTTGCGCTCACGTACTGGAACCTGGGGCAGCGGAAGGAAGCAGAGGAGCTTGAGGTG
GTGATGGAGAAGAGGCAGCAGCTGTCTGGTGATGATTATGATTGTTGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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