Fungal Genomics

General Properties

Protein ID	AgabiH97|052540
Gene name
Location	scaffold_2:3478204..3478993
Strand	+
Gene length (bp)	789
Transcript length (bp)	738
Coding sequence length (bp)	738
Protein length (aa)	246

Overview

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PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF00959	Phage_lysozyme	Phage lysozyme	3.4E-15	111	225

Swissprot hits

GO

GO Term	Description	Terminal node
GO:0016998	cell wall macromolecule catabolic process	Yes
GO:0009253	peptidoglycan catabolic process	Yes
GO:0003796	lysozyme activity	Yes
GO:1901575	organic substance catabolic process	No
GO:0043170	macromolecule metabolic process	No
GO:0030203	glycosaminoglycan metabolic process	No
GO:0008152	metabolic process	No
GO:0009056	catabolic process	No
GO:0008150	biological_process	No
GO:0071704	organic substance metabolic process	No
GO:1901565	organonitrogen compound catabolic process	No
GO:1901564	organonitrogen compound metabolic process	No
GO:0044248	cellular catabolic process	No
GO:0061783	peptidoglycan muralytic activity	No
GO:0006026	aminoglycan catabolic process	No
GO:0016787	hydrolase activity	No
GO:0006022	aminoglycan metabolic process	No
GO:0016798	hydrolase activity, acting on glycosyl bonds	No
GO:0006807	nitrogen compound metabolic process	No
GO:1901135	carbohydrate derivative metabolic process	No
GO:0000270	peptidoglycan metabolic process	No
GO:0003674	molecular_function	No
GO:0044036	cell wall macromolecule metabolic process	No
GO:1901136	carbohydrate derivative catabolic process	No
GO:0009987	cellular process	No
GO:0006027	glycosaminoglycan catabolic process	No
GO:0003824	catalytic activity	No
GO:0044265	cellular macromolecule catabolic process	No
GO:0009057	macromolecule catabolic process	No
GO:0044237	cellular metabolic process	No
GO:0044260	cellular macromolecule metabolic process	No
GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	No

Deeploc

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Localizations	Signals	Cytoplasm	Nucleus	Extracellular	Cell membrane	Mitochondrion	Plastid	Endoplasmic reticulum	Lysosome vacuole	Golgi apparatus	Peroxisome
Extracellular	Signal peptide	0.0934	0.0404	0.9746	0.0909	0.0519	0.0213	0.0777	0.2012	0.1287	0.0016

SignalP

SignalP signal predicted	Location	Score
Yes	1 - 20	0.999763

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

CAZyme category	E-value	Start	End
GH24	1.2E-38	86	227

Secondary Metabolism

(None)

Expression data

Analysis 1: Developmental stages of Agaricus bisporus (strain A15). Published in Pelkmans et al, Applied Microbiology and Biotechnology, 2016

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Orthologs

Orthofinder run ID	1
Orthogroup	1278
Change Orthofinder run	1: Agaricomycetes 5: Agaricus - all strains

Species	Protein ID
Agaricus bisporus var bisporus H39	AgabiH39|052540
Agaricus bisporus var bisporus H39	AgabiH39|100120
Agaricus bisporus var bisporus H97	AgabiH97|052540 (this protein)
Agaricus bisporus var bisporus H97	AgabiH97|100120

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus Download genbank file of locus (reverse complement) The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>AgabiH97|052540 MRTSFAYLFAIAVVSTTVGAAPNNVCHVDSTPGVCISTADCSNLGGTSHSSTDLCADSAGSDCCVFVDADNDNEH VARACAPPRVNSATISLIKEFEGFVKSPSPDPIGLPTVGFGHLCKSKGCAEVPYKFPLTEANAGKLLQTDIKSFT KCVSDNIKDAVKLNANQFGALSSWAFNVGCGNVKASALVARLNRGEKPNTVAAEELPKWRLAGGKVLKGLVRRRA AEVKLFKTASKAIAHPPKCG*
Coding	>AgabiH97|052540 ATGCGCACTTCTTTCGCCTACCTTTTTGCAATTGCTGTCGTGTCCACCACTGTTGGAGCGGCTCCCAACAATGTT TGCCATGTCGACAGCACACCAGGTGTGTGTATTTCGACGGCAGATTGCTCCAATCTCGGCGGAACGTCGCACTCA TCGACAGACCTCTGCGCTGATTCTGCAGGATCAGATTGCTGTGTCTTCGTCGATGCCGACAACGACAACGAACAT GTAGCTCGTGCTTGTGCCCCGCCACGGGTGAACAGCGCGACGATCTCATTGATCAAGGAGTTTGAGGGATTCGTC AAGAGTCCATCTCCCGATCCAATAGGTCTACCGACAGTGGGATTCGGCCACCTTTGCAAGTCTAAAGGTTGTGCC GAAGTTCCCTACAAATTTCCACTCACCGAAGCGAACGCCGGAAAACTCCTCCAAACCGATATCAAGTCCTTCACG AAATGTGTCTCGGATAACATCAAAGACGCAGTCAAGTTGAATGCGAATCAGTTCGGAGCACTCTCGTCTTGGGCC TTTAATGTAGGCTGTGGAAACGTCAAGGCTTCAGCGCTGGTGGCGAGGTTGAACAGGGGCGAGAAGCCAAACACT GTCGCTGCGGAGGAATTGCCCAAGTGGCGCTTGGCTGGTGGAAAAGTGTTGAAAGGGTTGGTAAGGAGGAGGGCT GCCGAAGTCAAGTTGTTCAAAACTGCTTCGAAAGCCATAGCCCATCCTCCCAAGTGCGGCTAG
Transcript	>AgabiH97|052540 ATGCGCACTTCTTTCGCCTACCTTTTTGCAATTGCTGTCGTGTCCACCACTGTTGGAGCGGCTCCCAACAATGTT TGCCATGTCGACAGCACACCAGGTGTGTGTATTTCGACGGCAGATTGCTCCAATCTCGGCGGAACGTCGCACTCA TCGACAGACCTCTGCGCTGATTCTGCAGGATCAGATTGCTGTGTCTTCGTCGATGCCGACAACGACAACGAACAT GTAGCTCGTGCTTGTGCCCCGCCACGGGTGAACAGCGCGACGATCTCATTGATCAAGGAGTTTGAGGGATTCGTC AAGAGTCCATCTCCCGATCCAATAGGTCTACCGACAGTGGGATTCGGCCACCTTTGCAAGTCTAAAGGTTGTGCC GAAGTTCCCTACAAATTTCCACTCACCGAAGCGAACGCCGGAAAACTCCTCCAAACCGATATCAAGTCCTTCACG AAATGTGTCTCGGATAACATCAAAGACGCAGTCAAGTTGAATGCGAATCAGTTCGGAGCACTCTCGTCTTGGGCC TTTAATGTAGGCTGTGGAAACGTCAAGGCTTCAGCGCTGGTGGCGAGGTTGAACAGGGGCGAGAAGCCAAACACT GTCGCTGCGGAGGAATTGCCCAAGTGGCGCTTGGCTGGTGGAAAAGTGTTGAAAGGGTTGGTAAGGAGGAGGGCT GCCGAAGTCAAGTTGTTCAAAACTGCTTCGAAAGCCATAGCCCATCCTCCCAAGTGCGGCTAG
Gene	>AgabiH97|052540 ATGCGCACTTCTTTCGCCTACCTTTTTGCAATTGCTGTCGTGTCCACCACTGTTGGAGCGGCTCCCAACAATGTT TGCCATGTCGACAGCACACCAGGTGTGTGTATTTCGACGGCAGATTGCTCCAATCTCGGCGGAACGTCGCACTCA TCGACAGGTACGTTCTTTCGTTCTTCAAAGAGAATGCAGTGATTGATTGAGTTCTTAGACCTCTGCGCTGATTCT GCAGGATCAGATTGCTGTGTCTTCGTCGATGCCGACAACGACAACGAACATGTAGCTCGTGCTTGTGCCCCGCCA CGGGTGAACAGCGCGACGATCTCATTGATCAAGGAGTTTGAGGGATTCGTCAAGAGTCCATCTCCCGATCCAATA GGTCTACCGACAGTGGGATTCGGCCACCTTTGCAAGTCTAAAGGTTGTGCCGAAGTTCCCTACAAATTTCCACTC ACCGAAGCGAACGCCGGAAAACTCCTCCAAACCGATATCAAGTCCTTCACGAAATGTGTCTCGGATAACATCAAA GACGCAGTCAAGTTGAATGCGAATCAGTTCGGAGCACTCTCGTCTTGGGCCTTTAATGTAGGCTGTGGAAACGTC AAGGCTTCAGCGCTGGTGGCGAGGTTGAACAGGGGCGAGAAGCCAAACACTGTCGCTGCGGAGGAATTGCCCAAG TGGCGCTTGGCTGGTGGAAAAGTGTTGAAAGGGTTGGTAAGGAGGAGGGCTGCCGAAGTCAAGTTGTTCAAAACT GCTTCGAAAGCCATAGCCCATCCTCCCAAGTGCGGCTAG