Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabiH97|052530
Gene name
Locationscaffold_2:3476751..3477657
Strand-
Gene length (bp)906
Transcript length (bp)906
Coding sequence length (bp)906
Protein length (aa) 302

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF03372 Exo_endo_phos Endonuclease/Exonuclease/phosphatase family 1.3E-09 56 287

Swissprot hits

(None)

GO

GO Term Description Terminal node
GO:0003824 catalytic activity Yes
GO:0003674 molecular_function No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 19 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Developmental stages of Agaricus bisporus (strain A15). Published in Pelkmans et al, Applied Microbiology and Biotechnology, 2016

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >AgabiH97|052530
MWSTISQLFVPNPTPVPQLPHPRPVFQTLYSFDDGWRPMKPNGDSSVCLDARFGILTWNIDFSGPLPILRFQTVL
SFLQELLSPDDKPTIILLQEFHKSCFSTLHSNPFIRATYTLSDTSGSTWDPNSSFGLLTLVPKSLSGHVTSIFRT
PFPTSKMGRDALYIDLNWAKKVRIANTHLESLPGHGDRVRPAQMQSISEFLSSPGISGGLVGGDMNAISPSDATI
HEAAGLTDAWLGDEGDTWGYQPPTVFPPGRLDKVLFKGCLKVERIERVGIGLKCGDSWVSDHYGLFASVVVESEL
P*
Coding >AgabiH97|052530
ATGTGGTCAACCATCTCCCAGCTCTTCGTCCCCAACCCGACGCCTGTGCCTCAGCTTCCACATCCTCGTCCTGTG
TTCCAGACGCTGTACAGCTTTGATGACGGATGGCGTCCAATGAAACCCAATGGCGATAGCTCAGTTTGCCTTGAT
GCGAGATTTGGGATTCTAACGTGGAACATTGATTTCTCTGGCCCTCTGCCTATCCTTCGATTTCAAACCGTCTTG
TCTTTTCTGCAAGAACTACTTTCGCCGGATGACAAACCGACTATAATCCTTCTTCAAGAATTCCACAAAAGCTGC
TTTTCCACCCTTCACTCCAACCCTTTCATTCGTGCAACATATACCCTCAGTGACACGAGTGGGTCGACATGGGAC
CCCAATTCCTCTTTTGGACTCCTCACACTCGTCCCGAAATCGCTCAGTGGACACGTTACATCGATATTCCGTACC
CCGTTCCCCACCAGTAAAATGGGACGGGACGCGTTGTACATCGATCTTAATTGGGCGAAAAAGGTCAGGATTGCC
AACACGCATCTAGAATCTCTTCCTGGACACGGAGATAGAGTGCGCCCCGCGCAAATGCAGTCTATATCCGAGTTC
TTGTCTTCCCCGGGAATATCGGGTGGACTTGTCGGTGGGGATATGAATGCTATATCACCATCAGACGCCACTATC
CACGAAGCGGCAGGGTTGACGGATGCTTGGCTCGGGGATGAGGGCGACACGTGGGGGTATCAACCTCCGACGGTG
TTCCCTCCAGGTCGACTAGACAAGGTGCTGTTCAAGGGATGCTTGAAAGTGGAAAGGATAGAGAGAGTCGGAATA
GGATTGAAATGCGGTGACTCGTGGGTCAGTGACCACTATGGCTTGTTCGCCTCCGTTGTCGTAGAATCAGAGCTG
CCTTGA
Transcript >AgabiH97|052530
ATGTGGTCAACCATCTCCCAGCTCTTCGTCCCCAACCCGACGCCTGTGCCTCAGCTTCCACATCCTCGTCCTGTG
TTCCAGACGCTGTACAGCTTTGATGACGGATGGCGTCCAATGAAACCCAATGGCGATAGCTCAGTTTGCCTTGAT
GCGAGATTTGGGATTCTAACGTGGAACATTGATTTCTCTGGCCCTCTGCCTATCCTTCGATTTCAAACCGTCTTG
TCTTTTCTGCAAGAACTACTTTCGCCGGATGACAAACCGACTATAATCCTTCTTCAAGAATTCCACAAAAGCTGC
TTTTCCACCCTTCACTCCAACCCTTTCATTCGTGCAACATATACCCTCAGTGACACGAGTGGGTCGACATGGGAC
CCCAATTCCTCTTTTGGACTCCTCACACTCGTCCCGAAATCGCTCAGTGGACACGTTACATCGATATTCCGTACC
CCGTTCCCCACCAGTAAAATGGGACGGGACGCGTTGTACATCGATCTTAATTGGGCGAAAAAGGTCAGGATTGCC
AACACGCATCTAGAATCTCTTCCTGGACACGGAGATAGAGTGCGCCCCGCGCAAATGCAGTCTATATCCGAGTTC
TTGTCTTCCCCGGGAATATCGGGTGGACTTGTCGGTGGGGATATGAATGCTATATCACCATCAGACGCCACTATC
CACGAAGCGGCAGGGTTGACGGATGCTTGGCTCGGGGATGAGGGCGACACGTGGGGGTATCAACCTCCGACGGTG
TTCCCTCCAGGTCGACTAGACAAGGTGCTGTTCAAGGGATGCTTGAAAGTGGAAAGGATAGAGAGAGTCGGAATA
GGATTGAAATGCGGTGACTCGTGGGTCAGTGACCACTATGGCTTGTTCGCCTCCGTTGTCGTAGAATCAGAGCTG
CCTTGA
Gene >AgabiH97|052530
ATGTGGTCAACCATCTCCCAGCTCTTCGTCCCCAACCCGACGCCTGTGCCTCAGCTTCCACATCCTCGTCCTGTG
TTCCAGACGCTGTACAGCTTTGATGACGGATGGCGTCCAATGAAACCCAATGGCGATAGCTCAGTTTGCCTTGAT
GCGAGATTTGGGATTCTAACGTGGAACATTGATTTCTCTGGCCCTCTGCCTATCCTTCGATTTCAAACCGTCTTG
TCTTTTCTGCAAGAACTACTTTCGCCGGATGACAAACCGACTATAATCCTTCTTCAAGAATTCCACAAAAGCTGC
TTTTCCACCCTTCACTCCAACCCTTTCATTCGTGCAACATATACCCTCAGTGACACGAGTGGGTCGACATGGGAC
CCCAATTCCTCTTTTGGACTCCTCACACTCGTCCCGAAATCGCTCAGTGGACACGTTACATCGATATTCCGTACC
CCGTTCCCCACCAGTAAAATGGGACGGGACGCGTTGTACATCGATCTTAATTGGGCGAAAAAGGTCAGGATTGCC
AACACGCATCTAGAATCTCTTCCTGGACACGGAGATAGAGTGCGCCCCGCGCAAATGCAGTCTATATCCGAGTTC
TTGTCTTCCCCGGGAATATCGGGTGGACTTGTCGGTGGGGATATGAATGCTATATCACCATCAGACGCCACTATC
CACGAAGCGGCAGGGTTGACGGATGCTTGGCTCGGGGATGAGGGCGACACGTGGGGGTATCAACCTCCGACGGTG
TTCCCTCCAGGTCGACTAGACAAGGTGCTGTTCAAGGGATGCTTGAAAGTGGAAAGGATAGAGAGAGTCGGAATA
GGATTGAAATGCGGTGACTCGTGGGTCAGTGACCACTATGGCTTGTTCGCCTCCGTTGTCGTAGAATCAGAGCTG
CCTTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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