Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabiH97|052090
Gene name
Locationscaffold_2:3377463..3378780
Strand-
Gene length (bp)1317
Transcript length (bp)750
Coding sequence length (bp)750
Protein length (aa) 250

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF13499 EF-hand_7 EF-hand domain pair 2.2E-07 81 135
PF13499 EF-hand_7 EF-hand domain pair 2.5E-09 144 243
PF13405 EF-hand_6 EF-hand domain 9.1E-07 144 170
PF13202 EF-hand_5 EF hand 2.6E-02 80 99
PF13202 EF-hand_5 EF hand 1.3E-01 121 136
PF13202 EF-hand_5 EF hand 9.4E-03 147 166
PF13202 EF-hand_5 EF hand 1.4E-01 222 232
PF13833 EF-hand_8 EF-hand domain pair 1.4E-05 105 139

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|Q5PQ53|PEF1_XENLA Peflin OS=Xenopus laevis GN=pef1 PE=1 SV=1 18 242 4.0E-53
sp|O75340|PDCD6_HUMAN Programmed cell death protein 6 OS=Homo sapiens GN=PDCD6 PE=1 SV=1 77 248 2.0E-49
sp|P12815|PDCD6_MOUSE Programmed cell death protein 6 OS=Mus musculus GN=Pdcd6 PE=1 SV=2 77 248 3.0E-49
sp|Q8BFY6|PEF1_MOUSE Peflin OS=Mus musculus GN=Pef1 PE=1 SV=1 38 247 2.0E-48
sp|Q9UBV8|PEF1_HUMAN Peflin OS=Homo sapiens GN=PEF1 PE=1 SV=1 68 247 1.0E-47
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Swissprot ID Swissprot Description Start End E-value
sp|Q5PQ53|PEF1_XENLA Peflin OS=Xenopus laevis GN=pef1 PE=1 SV=1 18 242 4.0E-53
sp|O75340|PDCD6_HUMAN Programmed cell death protein 6 OS=Homo sapiens GN=PDCD6 PE=1 SV=1 77 248 2.0E-49
sp|P12815|PDCD6_MOUSE Programmed cell death protein 6 OS=Mus musculus GN=Pdcd6 PE=1 SV=2 77 248 3.0E-49
sp|Q8BFY6|PEF1_MOUSE Peflin OS=Mus musculus GN=Pef1 PE=1 SV=1 38 247 2.0E-48
sp|Q9UBV8|PEF1_HUMAN Peflin OS=Homo sapiens GN=PEF1 PE=1 SV=1 68 247 1.0E-47
sp|Q641Z8|PEF1_RAT Peflin OS=Rattus norvegicus GN=Pef1 PE=2 SV=1 68 247 1.0E-45
sp|Q6DC93|PEF1_DANRE Peflin OS=Danio rerio GN=pef1 PE=2 SV=1 70 247 1.0E-42
sp|Q8W4L0|CML49_ARATH Probable calcium-binding protein CML49 OS=Arabidopsis thaliana GN=CML49 PE=2 SV=1 16 246 8.0E-40
sp|Q94743|SORCN_SCHJA Sorcin OS=Schistosoma japonicum PE=2 SV=1 77 248 1.0E-39
sp|Q9FYE4|CML50_ARATH Probable calcium-binding protein CML50 OS=Arabidopsis thaliana GN=CML50 PE=2 SV=1 7 246 3.0E-37
sp|Q6P069|SORCN_MOUSE Sorcin OS=Mus musculus GN=Sri PE=1 SV=1 69 248 2.0E-35
sp|P30626|SORCN_HUMAN Sorcin OS=Homo sapiens GN=SRI PE=1 SV=1 69 248 5.0E-35
sp|Q5R4U9|SORCN_PONAB Sorcin OS=Pongo abelii GN=SRI PE=2 SV=1 69 248 5.0E-35
sp|P05044|SORCN_CRIGR Sorcin OS=Cricetulus griseus GN=SRI PE=1 SV=1 69 248 1.0E-34
sp|Q8VC88|GRAN_MOUSE Grancalcin OS=Mus musculus GN=Gca PE=1 SV=1 25 248 3.0E-32
sp|P28676|GRAN_HUMAN Grancalcin OS=Homo sapiens GN=GCA PE=1 SV=2 59 248 4.0E-28
sp|Q5RAI6|GRAN_PONAB Grancalcin OS=Pongo abelii GN=GCA PE=2 SV=1 31 248 6.0E-27
sp|Q96L46|CPNS2_HUMAN Calpain small subunit 2 OS=Homo sapiens GN=CAPNS2 PE=2 SV=2 109 246 1.0E-22
sp|Q9D7J7|CPNS2_MOUSE Calpain small subunit 2 OS=Mus musculus GN=Capns2 PE=2 SV=1 109 246 3.0E-21
sp|Q9ZQH1|CML48_ARATH Probable calcium-binding protein CML48 OS=Arabidopsis thaliana GN=CML48 PE=2 SV=2 54 246 8.0E-20
sp|Q92177|CAN3_CHICK Calpain-3 OS=Gallus gallus GN=CAPN3 PE=2 SV=1 109 246 5.0E-19
sp|P04632|CPNS1_HUMAN Calpain small subunit 1 OS=Homo sapiens GN=CAPNS1 PE=1 SV=1 109 246 5.0E-19
sp|P53238|PEF1_YEAST Peflin OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=PEF1 PE=1 SV=2 80 248 6.0E-19
sp|Q9GLG7|CAN3_MACFA Calpain-3 OS=Macaca fascicularis GN=CAPN3 PE=2 SV=1 49 246 3.0E-18
sp|P20807|CAN3_HUMAN Calpain-3 OS=Homo sapiens GN=CAPN3 PE=1 SV=2 49 246 4.0E-18
sp|P43368|CAN3_PIG Calpain-3 OS=Sus scrofa GN=CAPN3 PE=2 SV=2 109 246 5.0E-18
sp|Q9TTH8|CAN3_SHEEP Calpain-3 OS=Ovis aries GN=CAPN3 PE=2 SV=1 109 246 7.0E-18
sp|P51186|CAN3_BOVIN Calpain-3 OS=Bos taurus GN=CAPN3 PE=2 SV=2 109 246 9.0E-18
sp|P16259|CAN3_RAT Calpain-3 OS=Rattus norvegicus GN=Capn3 PE=2 SV=1 109 246 1.0E-17
sp|Q64691|CAN3_MOUSE Calpain-3 OS=Mus musculus GN=Capn3 PE=2 SV=2 109 246 2.0E-17
sp|P35750|CAN1_PIG Calpain-1 catalytic subunit OS=Sus scrofa GN=CAPN1 PE=2 SV=3 109 246 3.0E-17
sp|Q5NVS7|CAN1_PONAB Calpain-1 catalytic subunit OS=Pongo abelii GN=CAPN1 PE=2 SV=1 109 246 5.0E-17
sp|Q9GLG2|CAN1_MACFA Calpain-1 catalytic subunit OS=Macaca fascicularis GN=CAPN1 PE=2 SV=1 109 246 5.0E-17
sp|P07384|CAN1_HUMAN Calpain-1 catalytic subunit OS=Homo sapiens GN=CAPN1 PE=1 SV=1 109 246 6.0E-17
sp|Q27970|CAN1_BOVIN Calpain-1 catalytic subunit OS=Bos taurus GN=CAPN1 PE=1 SV=3 107 246 7.0E-17
sp|Q92178|CAN2_CHICK Calpain-2 catalytic subunit OS=Gallus gallus GN=CAPN2 PE=2 SV=3 109 242 8.0E-17
sp|A6NHC0|CAN8_HUMAN Calpain-8 OS=Homo sapiens GN=CAPN8 PE=2 SV=3 88 246 2.0E-16
sp|O35350|CAN1_MOUSE Calpain-1 catalytic subunit OS=Mus musculus GN=Capn1 PE=1 SV=1 109 246 2.0E-16
sp|P97571|CAN1_RAT Calpain-1 catalytic subunit OS=Rattus norvegicus GN=Capn1 PE=1 SV=1 109 246 3.0E-16
sp|P06815|CAN1_RABIT Calpain-1 catalytic subunit (Fragment) OS=Oryctolagus cuniculus GN=CAPN1 PE=1 SV=1 109 246 3.0E-16
sp|Q91VA3|CAN8_MOUSE Calpain-8 OS=Mus musculus GN=Capn8 PE=1 SV=1 53 246 4.0E-16
sp|Q4V8Q1|CAN11_RAT Calpain 11 OS=Rattus norvegicus GN=Capn11 PE=2 SV=2 109 246 7.0E-16
sp|Q9VT65|CANB_DROME Calpain-B OS=Drosophila melanogaster GN=CalpB PE=1 SV=2 109 246 9.0E-16
sp|P06814|CAN2_RABIT Calpain-2 catalytic subunit (Fragment) OS=Oryctolagus cuniculus GN=CAPN2 PE=1 SV=1 111 236 1.0E-15
sp|Q95YL5|PEFA_DICDI Penta-EF hand domain-containing protein 1 OS=Dictyostelium discoideum GN=pefA PE=1 SV=1 80 245 1.0E-15
sp|O08529|CAN2_MOUSE Calpain-2 catalytic subunit OS=Mus musculus GN=Capn2 PE=1 SV=4 109 237 1.0E-15
sp|Q07009|CAN2_RAT Calpain-2 catalytic subunit OS=Rattus norvegicus GN=Capn2 PE=1 SV=3 109 236 2.0E-15
sp|Q9GLG1|CAN2_MACFA Calpain-2 catalytic subunit OS=Macaca fascicularis GN=CAPN2 PE=2 SV=3 109 236 3.0E-15
sp|Q27971|CAN2_BOVIN Calpain-2 catalytic subunit OS=Bos taurus GN=CAPN2 PE=2 SV=2 109 236 3.0E-15
sp|P17655|CAN2_HUMAN Calpain-2 catalytic subunit OS=Homo sapiens GN=CAPN2 PE=1 SV=6 109 236 3.0E-15
sp|Q78EJ9|CAN8_RAT Calpain-8 OS=Rattus norvegicus GN=Capn8 PE=2 SV=1 88 246 3.0E-15
sp|Q95YL4|PEFB_DICDI Penta-EF hand domain-containing protein 2 OS=Dictyostelium discoideum GN=pefB PE=1 SV=1 76 245 3.0E-15
sp|P13135|CPNS1_BOVIN Calpain small subunit 1 OS=Bos taurus GN=CAPNS1 PE=2 SV=1 29 246 4.0E-15
sp|O14815|CAN9_HUMAN Calpain-9 OS=Homo sapiens GN=CAPN9 PE=1 SV=1 91 248 2.0E-14
sp|P06813|CPNS1_RABIT Calpain small subunit 1 OS=Oryctolagus cuniculus GN=CAPNS1 PE=1 SV=1 37 246 2.0E-14
sp|Q6J756|CAN11_MOUSE Calpain-11 OS=Mus musculus GN=Capn11 PE=1 SV=1 109 246 5.0E-14
sp|P43367|CAN2_PIG Calpain-2 catalytic subunit (Fragment) OS=Sus scrofa GN=CAPN2 PE=2 SV=2 109 236 2.0E-13
sp|P04574|CPNS1_PIG Calpain small subunit 1 OS=Sus scrofa GN=CAPNS1 PE=1 SV=1 37 246 2.0E-13
sp|P00789|CANX_CHICK Calpain-1 catalytic subunit OS=Gallus gallus PE=1 SV=2 109 229 2.0E-13
sp|Q64537|CPNS1_RAT Calpain small subunit 1 OS=Rattus norvegicus GN=Capns1 PE=1 SV=3 33 246 6.0E-13
sp|O88456|CPNS1_MOUSE Calpain small subunit 1 OS=Mus musculus GN=Capns1 PE=1 SV=1 33 246 2.0E-12
sp|Q9D805|CAN9_MOUSE Calpain-9 OS=Mus musculus GN=Capn9 PE=2 SV=2 91 248 1.0E-11
sp|Q11002|CANA_DROME Calpain-A OS=Drosophila melanogaster GN=CalpA PE=1 SV=2 109 246 2.0E-11
sp|O35920|CAN9_RAT Calpain-9 OS=Rattus norvegicus GN=Capn9 PE=2 SV=2 91 248 3.0E-11
sp|Q9FMP5|CDPKH_ARATH Calcium-dependent protein kinase 17 OS=Arabidopsis thaliana GN=CPK17 PE=2 SV=1 77 210 2.0E-09
sp|Q9ZV15|CDPKK_ARATH Calcium-dependent protein kinase 20 OS=Arabidopsis thaliana GN=CPK20 PE=3 SV=1 77 173 6.0E-09
sp|Q3E9C0|CDPKY_ARATH Calcium-dependent protein kinase 34 OS=Arabidopsis thaliana GN=CPK34 PE=2 SV=1 77 185 7.0E-09
sp|A8MX76|CAN14_HUMAN Calpain-14 OS=Homo sapiens GN=CAPN14 PE=2 SV=2 87 229 4.0E-08
sp|P27730|CAN_SCHMA Calpain OS=Schistosoma mansoni PE=2 SV=1 74 243 4.0E-08
sp|Q6ZSI9|CAN12_HUMAN Calpain-12 OS=Homo sapiens GN=CAPN12 PE=2 SV=1 111 244 5.0E-08
sp|Q9UMQ6|CAN11_HUMAN Calpain-11 OS=Homo sapiens GN=CAPN11 PE=2 SV=2 109 246 1.0E-07
sp|Q9ZSA2|CDPKL_ARATH Calcium-dependent protein kinase 21 OS=Arabidopsis thaliana GN=CPK21 PE=1 SV=1 77 185 4.0E-07
sp|Q42438|CDPK8_ARATH Calcium-dependent protein kinase 8 OS=Arabidopsis thaliana GN=CPK8 PE=1 SV=1 67 159 7.0E-07
sp|Q9NZT1|CALL5_HUMAN Calmodulin-like protein 5 OS=Homo sapiens GN=CALML5 PE=1 SV=2 71 189 1.0E-06
sp|Q9SZM3|CDPKQ_ARATH Calcium-dependent protein kinase 26 OS=Arabidopsis thaliana GN=CPK26 PE=2 SV=1 77 188 2.0E-06
sp|Q9S9V0|CDPKV_ARATH Calcium-dependent protein kinase 31 OS=Arabidopsis thaliana GN=CPK31 PE=2 SV=2 77 173 2.0E-06
sp|Q9ZSA4|CDPKR_ARATH Calcium-dependent protein kinase 27 OS=Arabidopsis thaliana GN=CPK27 PE=1 SV=3 77 172 5.0E-06
sp|Q38870|CDPK2_ARATH Calcium-dependent protein kinase 2 OS=Arabidopsis thaliana GN=CPK2 PE=1 SV=1 77 176 7.0E-06
sp|A5A7I8|CDPK5_SOLTU Calcium-dependent protein kinase 5 OS=Solanum tuberosum GN=CPK5 PE=2 SV=1 77 167 9.0E-06
sp|P57796|CABP4_HUMAN Calcium-binding protein 4 OS=Homo sapiens GN=CABP4 PE=1 SV=2 24 210 1.0E-05
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GO

GO Term Description Terminal node
GO:0005509 calcium ion binding Yes
GO:0046872 metal ion binding No
GO:0003674 molecular_function No
GO:0043167 ion binding No
GO:0005488 binding No
GO:0043169 cation binding No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 16 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Developmental stages of Agaricus bisporus (strain A15). Published in Pelkmans et al, Applied Microbiology and Biotechnology, 2016

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >AgabiH97|052090
MSYGGNYGSGGGFPPPAGRPTQGGGYGGPPGGGFGGSPGGGYGGPPGAGYGGASGYGGGFSAPQQSHGPPPGADP
QLWNWFTAVDTDRSNHITAPELERALINGDWTPFDLDTVKLLMTIFDTDRSGTIGFNEFSGLWKYIKDWQNVFRH
FDRDRSGSIDGGELQQALHQFGFNLAPPMIELVQKKYDVKASATQMPGAPVPGISFDRFVRACVVVKQLTEAFQK
LDTDRDGWVQISYDQFMQTVLSLP*
Coding >AgabiH97|052090
ATGTCTTACGGAGGAAACTATGGTAGTGGTGGTGGATTCCCACCTCCCGCAGGACGACCTACCCAGGGCGGCGGT
TACGGTGGACCTCCCGGGGGAGGGTTTGGAGGATCGCCCGGTGGTGGATATGGAGGACCACCTGGTGCAGGATAT
GGCGGTGCTTCTGGCTACGGAGGAGGATTTTCTGCACCTCAACAAAGTCATGGACCACCGCCTGGTGCTGATCCT
CAGCTTTGGAATTGGTTCACCGCCGTAGATACGGATAGATCTAACCATATAACTGCACCCGAGCTTGAGAGAGCG
CTCATCAATGGCGATTGGACTCCTTTCGACTTGGATACCGTTAAATTGCTTATGACGATCTTCGATACCGATCGT
AGTGGGACTATCGGATTCAACGAATTTTCTGGGCTTTGGAAGTACATCAAGGACTGGCAAAATGTCTTTAGACAC
TTTGATCGCGACCGATCTGGTTCCATCGACGGTGGAGAGCTTCAACAGGCCCTCCATCAATTTGGTTTCAATTTA
GCGCCTCCAATGATTGAACTCGTACAGAAGAAATACGACGTCAAAGCTTCCGCCACACAAATGCCTGGTGCTCCA
GTTCCAGGAATCTCGTTTGATCGTTTCGTACGGGCTTGCGTCGTCGTCAAGCAACTCACCGAGGCGTTCCAAAAG
CTTGATACCGACCGAGATGGATGGGTTCAAATAAGTTATGATCAGTTTATGCAAACCGTACTCAGCTTGCCCTGA
Transcript >AgabiH97|052090
ATGTCTTACGGAGGAAACTATGGTAGTGGTGGTGGATTCCCACCTCCCGCAGGACGACCTACCCAGGGCGGCGGT
TACGGTGGACCTCCCGGGGGAGGGTTTGGAGGATCGCCCGGTGGTGGATATGGAGGACCACCTGGTGCAGGATAT
GGCGGTGCTTCTGGCTACGGAGGAGGATTTTCTGCACCTCAACAAAGTCATGGACCACCGCCTGGTGCTGATCCT
CAGCTTTGGAATTGGTTCACCGCCGTAGATACGGATAGATCTAACCATATAACTGCACCCGAGCTTGAGAGAGCG
CTCATCAATGGCGATTGGACTCCTTTCGACTTGGATACCGTTAAATTGCTTATGACGATCTTCGATACCGATCGT
AGTGGGACTATCGGATTCAACGAATTTTCTGGGCTTTGGAAGTACATCAAGGACTGGCAAAATGTCTTTAGACAC
TTTGATCGCGACCGATCTGGTTCCATCGACGGTGGAGAGCTTCAACAGGCCCTCCATCAATTTGGTTTCAATTTA
GCGCCTCCAATGATTGAACTCGTACAGAAGAAATACGACGTCAAAGCTTCCGCCACACAAATGCCTGGTGCTCCA
GTTCCAGGAATCTCGTTTGATCGTTTCGTACGGGCTTGCGTCGTCGTCAAGCAACTCACCGAGGCGTTCCAAAAG
CTTGATACCGACCGAGATGGATGGGTTCAAATAAGTTATGATCAGTTTATGCAAACCGTACTCAGCTTGCCCTGA
Gene >AgabiH97|052090
ATGTCTTACGGAGGAGTGAGTGTTCTACCCCAGCAGACTGTGTTTTTCTTGAGCGGGTTGTAGAACTATGGTAGT
GGTGGTGGATTCCCACCTCCCGCAGGACGACCTACCCAGGGCGGCGGTTACGGTGGACCTCCCGGGGGAGGGTTT
GGAGGATCGCCCGGTGGTGGATATGGAGGACCACCTGGTGCAGGATATGGCGGTGCTTCTGTCAGTGTCTCTTCT
CGTTGATTTCTTGCACGCATGAAGAAAAGATCAGCTGATAATTGTCTTGTGATTCAGGGCTACGGAGGAGGATTT
TCTGCACCTCAACAAAGTCATGGACCACCGCCTGGTGCTGATCCTCAGTTAGTGCGCTTTCTAGTCCATCTCAGA
ATATGACTAATGGACGTTGCTTTTTGTTTTTTCAAGGCTTTGGAATTGGTTCACCGCCGTAGATACGGATAGATC
TAACCATATAACTGCACCCGAGCTTGGTCTGTTCTTCTTGCTATTGGTGTGACGACTCGCGTTACTTATGATTTG
ATTCAGAGAGAGCGCTCATCAATGGCGATTGGACTCGTGAGTTTCGGATGTAGTATGGGAAGTCTCAGATTGCTT
AATGAGCTGCCGGATTAGCTTTCGACTTGGATACCGTTAAATTGCTTATGACGATCTTCGTAAGTAATCCTCCGA
TAGACATGTGAAACTGCTGATAACGGGATATAGGATACCGATCGTAGTGGGACTATCGGATTCAACGAAGTCAGT
CGATTTCATCAGTCACAAGACGCCGAGGACTCAATGTTATTATAGTTTTCTGGGCTTTGGAAGTACATCAAGGTA
TATCGGATTGTTGATTTAGCGTCAGGTGAACTCTAAAGCGGTGATTAGGACTGGCAAAATGTCTTTAGACACTTT
GATCGCGACCGATCTGGTTCCATCGACGGTGGAGAGCTTCAACAGGCCCTCCATCAATTTGGGTGCGTAGATCTT
TAAAAATATATTGCCTTCACTCACGAGTGCTGATATCATTTATTTATAGTTTCAATTTAGCGCCTCCAATGATTG
AACTCGTACAGAAGAAATACGGTGAGTCTCTCTTCATGTTGGCTGTCATATTTTGGATTAGTCGAACGCTCACAC
TTAGACGTCAAAGCTTCCGCCACACAAATGCCTGGTGCTCCAGTTCCAGGAATCTCGTTTGATCGTTTCGTACGG
GCTTGCGTCGTCGTCAAGCAACTCACCGAGGCGTTCCAAAAGCTTGATACCGACCGAGATGGATGGGTTCAAATA
AGTTATGATCAGTTTATGCAAACCGTACTCAGCTTGCCCTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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