Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabiH97|051480
Gene name
Locationscaffold_2:3238122..3238943
Strand+
Gene length (bp)821
Transcript length (bp)681
Coding sequence length (bp)681
Protein length (aa) 227

Your browser does not support drawing a protein figure.

PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF01965 DJ-1_PfpI DJ-1/PfpI family 1.0E-09 63 196

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|Q8G9F9|INHA_PSEPU Isonitrile hydratase OS=Pseudomonas putida GN=inhA PE=1 SV=1 12 213 1.0E-13

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 28 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Developmental stages of Agaricus bisporus (strain A15). Published in Pelkmans et al, Applied Microbiology and Biotechnology, 2016

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >AgabiH97|051480
MSNHESLAGKTIHIALVLLPSYQYLDAAAPVDYINCHSKAMLTAFGTPENLIAKATEMHWYYIAESAGEPVHASS
GPAQIPTHSYKNPPPHLDYIIVPGADPKVPLSSDCAHFFKTYVPKLRALLTVCTGSLCIAPTGVLDGYSVCSNKF
ILRQLALAKELPKGINWVGDRRWIVDGKMWTGGGITAGLDLAAEFARRHFDPDIVELVKELLEEIHCMPPVLAAS
L*
Coding >AgabiH97|051480
ATGTCCAACCACGAGTCCTTGGCTGGGAAGACGATCCACATTGCACTTGTCCTACTACCCTCATATCAGTACCTC
GATGCCGCAGCACCCGTTGACTACATCAATTGTCACTCCAAAGCCATGCTTACTGCGTTTGGTACCCCTGAAAAC
CTTATAGCTAAAGCGACGGAGATGCACTGGTACTACATCGCCGAATCAGCCGGCGAACCCGTTCACGCATCATCC
GGGCCCGCCCAAATCCCGACTCACTCTTACAAAAACCCTCCACCTCATCTTGACTACATCATCGTTCCCGGAGCA
GACCCCAAGGTTCCTCTCTCTTCTGACTGCGCCCATTTCTTCAAAACCTACGTCCCAAAACTTCGAGCTTTATTG
ACGGTCTGCACCGGCTCTCTTTGCATTGCGCCAACCGGAGTCCTGGACGGTTATAGCGTATGCTCGAACAAATTC
ATCCTACGACAGCTCGCTTTAGCCAAGGAACTACCCAAGGGCATCAATTGGGTCGGAGACAGGAGGTGGATTGTA
GATGGAAAAATGTGGACTGGAGGAGGAATTACGGCAGGTCTGGATTTAGCAGCGGAGTTTGCTAGGAGACACTTC
GATCCCGATATTGTGGAACTAGTCAAAGAGCTACTTGAAGAGATACATTGCATGCCACCTGTGCTTGCTGCTAGT
CTGTAG
Transcript >AgabiH97|051480
ATGTCCAACCACGAGTCCTTGGCTGGGAAGACGATCCACATTGCACTTGTCCTACTACCCTCATATCAGTACCTC
GATGCCGCAGCACCCGTTGACTACATCAATTGTCACTCCAAAGCCATGCTTACTGCGTTTGGTACCCCTGAAAAC
CTTATAGCTAAAGCGACGGAGATGCACTGGTACTACATCGCCGAATCAGCCGGCGAACCCGTTCACGCATCATCC
GGGCCCGCCCAAATCCCGACTCACTCTTACAAAAACCCTCCACCTCATCTTGACTACATCATCGTTCCCGGAGCA
GACCCCAAGGTTCCTCTCTCTTCTGACTGCGCCCATTTCTTCAAAACCTACGTCCCAAAACTTCGAGCTTTATTG
ACGGTCTGCACCGGCTCTCTTTGCATTGCGCCAACCGGAGTCCTGGACGGTTATAGCGTATGCTCGAACAAATTC
ATCCTACGACAGCTCGCTTTAGCCAAGGAACTACCCAAGGGCATCAATTGGGTCGGAGACAGGAGGTGGATTGTA
GATGGAAAAATGTGGACTGGAGGAGGAATTACGGCAGGTCTGGATTTAGCAGCGGAGTTTGCTAGGAGACACTTC
GATCCCGATATTGTGGAACTAGTCAAAGAGCTACTTGAAGAGATACATTGCATGCCACCTGTGCTTGCTGCTAGT
CTGTAG
Gene >AgabiH97|051480
ATGTCCAACCACGAGTCCTTGGCTGGGAAGACGATCCACATTGCACTTGTCCTACTACCCTCATATCAGTACCTC
GATGCCGCAGCACCCGTTGACTACATCAATTGTCACTCCAAAGCCATGCTTACTGCGTTTGGTACCCCTGAAAAC
CTTATAGCTAAAGCGACGGAGATGCACTGGTACTACATCGCCGAATCAGCCGGCGAACCCGTTCACGCATCATCC
GGGCCCGCCCAAATCCCGACTCACTCTTACAAAAACCCTCCACCTCATCTTGACTACATCATCGTTCCCGGAGCA
GACCCCAAGGTTCCTCTCTCTTCTGACTGCGCCCATTTCTTCAAAACCTACGTCCCAAAACTTCGAGCTTTATTG
ACGGTCTGCACCGGCTCTCTTTGCATTGCGCCAACCGGAGTCCTGGACGGTTATAGCGTATGCTCGAACAAATTC
ATCCTACGACAGCTCGCTTTAGCCAAGGAACTACCCAAGGGCATCAATTGGGTCGGAGACAGGAGGTGGATTGTA
GATGGAAAAATGTGGACTGGAGGAGGAATTACGGCAGGTCTGGATTTAGCAGCGGAGTTTGCTAGGAGACACTTC
GATCCCGATATTGTGGAACTAGTCAAAGAGGTTAGCGAAGAGACGCCGAGACCTGATGTACCAGACGATTGGGCT
AAGATCACGGAGGGGCTCGGGTTGACCAGCACAAAAGCTACTTGAAGAGATACATTGCATGTACGCCTCAATTGT
ACTTTTTACTTGCACCTGCGCGACATAGTGATTCGTATTTTAGGCCACCTGTGCTTGCTGCTAGTCTGTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail