Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabiH97|051440
Gene name
Locationscaffold_2:3225889..3227321
Strand+
Gene length (bp)1432
Transcript length (bp)1167
Coding sequence length (bp)1167
Protein length (aa) 389

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF07859 Abhydrolase_3 alpha/beta hydrolase fold 6.0E-62 84 292
PF20434 BD-FAE BD-FAE 1.7E-20 72 180
PF00135 COesterase Carboxylesterase family 7.9E-10 68 179
PF10340 Say1_Mug180 Steryl acetyl hydrolase 6.2E-08 72 234
PF00326 Peptidase_S9 Prolyl oligopeptidase family 5.0E-05 131 292

Swissprot hits

[Show all]
Swissprot ID Swissprot Description Start End E-value
sp|Q9US38|YFZ3_SCHPO AB hydrolase superfamily protein C1039.03 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1039.03 PE=3 SV=1 6 297 8.0E-76
sp|Q9HDX3|YKN2_SCHPO AB hydrolase superfamily protein B1A11.02 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAPB1A11.02 PE=3 SV=1 61 301 1.0E-31
sp|P9WK87|NLHH_MYCTU Carboxylesterase NlhH OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) GN=nlhH PE=1 SV=1 60 281 3.0E-31
sp|P9WK86|NLHH_MYCTO Carboxylesterase NlhH OS=Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh) GN=nlhH PE=3 SV=1 60 281 3.0E-31
sp|Q5UQ83|YR526_MIMIV Putative alpha/beta hydrolase R526 OS=Acanthamoeba polyphaga mimivirus GN=MIMI_R526 PE=1 SV=1 69 296 1.0E-29
[Show all]
[Show less]
Swissprot ID Swissprot Description Start End E-value
sp|Q9US38|YFZ3_SCHPO AB hydrolase superfamily protein C1039.03 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1039.03 PE=3 SV=1 6 297 8.0E-76
sp|Q9HDX3|YKN2_SCHPO AB hydrolase superfamily protein B1A11.02 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAPB1A11.02 PE=3 SV=1 61 301 1.0E-31
sp|P9WK87|NLHH_MYCTU Carboxylesterase NlhH OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) GN=nlhH PE=1 SV=1 60 281 3.0E-31
sp|P9WK86|NLHH_MYCTO Carboxylesterase NlhH OS=Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh) GN=nlhH PE=3 SV=1 60 281 3.0E-31
sp|Q5UQ83|YR526_MIMIV Putative alpha/beta hydrolase R526 OS=Acanthamoeba polyphaga mimivirus GN=MIMI_R526 PE=1 SV=1 69 296 1.0E-29
sp|P24484|LIP2_MORS1 Lipase 2 OS=Moraxella sp. (strain TA144) GN=lip2 PE=1 SV=1 56 309 1.0E-22
sp|Q8BLF1|NCEH1_MOUSE Neutral cholesterol ester hydrolase 1 OS=Mus musculus GN=Nceh1 PE=1 SV=1 57 293 1.0E-22
sp|B2GV54|NCEH1_RAT Neutral cholesterol ester hydrolase 1 OS=Rattus norvegicus GN=Nceh1 PE=2 SV=1 57 293 1.0E-21
sp|Q9MAA7|GID1A_ARATH Gibberellin receptor GID1A OS=Arabidopsis thaliana GN=GID1A PE=1 SV=1 75 300 4.0E-21
sp|Q1JQE6|NCEH1_BOVIN Neutral cholesterol ester hydrolase 1 OS=Bos taurus GN=NCEH1 PE=2 SV=2 57 293 6.0E-21
sp|Q9LYC1|GID1B_ARATH Gibberellin receptor GID1B OS=Arabidopsis thaliana GN=GID1B PE=1 SV=1 82 304 1.0E-20
sp|Q7M370|AAAD_RABIT Arylacetamide deacetylase OS=Oryctolagus cuniculus GN=AADAC PE=1 SV=1 45 280 2.0E-20
sp|Q6PIU2|NCEH1_HUMAN Neutral cholesterol ester hydrolase 1 OS=Homo sapiens GN=NCEH1 PE=1 SV=3 57 293 3.0E-20
sp|Q6L545|GID1_ORYSJ Gibberellin receptor GID1 OS=Oryza sativa subsp. japonica GN=GID1 PE=1 SV=1 45 283 6.0E-20
sp|Q5R8Y5|NCEH1_PONAB Neutral cholesterol ester hydrolase 1 OS=Pongo abelii GN=NCEH1 PE=2 SV=1 57 293 1.0E-19
sp|Q6P093|ADCL2_HUMAN Arylacetamide deacetylase-like 2 OS=Homo sapiens GN=AADACL2 PE=2 SV=3 49 280 4.0E-19
sp|Q0P5B7|AAAD_BOVIN Arylacetamide deacetylase OS=Bos taurus GN=AADAC PE=2 SV=1 45 295 4.0E-19
sp|Q8LED9|CXE16_ARATH Probable carboxylesterase 16 OS=Arabidopsis thaliana GN=CXE16 PE=2 SV=1 70 296 6.0E-19
sp|Q9QZH8|AAAD_RAT Arylacetamide deacetylase OS=Rattus norvegicus GN=Aadac PE=2 SV=3 45 280 6.0E-19
sp|Q940G6|GID1C_ARATH Gibberellin receptor GID1C OS=Arabidopsis thaliana GN=GID1C PE=1 SV=1 82 283 9.0E-19
sp|O64640|CXE8_ARATH Probable carboxylesterase 8 OS=Arabidopsis thaliana GN=CXE8 PE=2 SV=1 40 323 4.0E-18
sp|Q99PG0|AAAD_MOUSE Arylacetamide deacetylase OS=Mus musculus GN=Aadac PE=1 SV=3 45 274 1.0E-17
sp|Q9LFR7|CXE17_ARATH Probable carboxylesterase 17 OS=Arabidopsis thaliana GN=CXE17 PE=2 SV=1 43 301 2.0E-17
sp|Q6UEG5|AFLJ_ASPPA Versiconal hemiacetal acetate esterase OS=Aspergillus parasiticus GN=estA PE=1 SV=1 47 290 5.0E-17
sp|P14326|VSH5_DICDI Vegetative-specific protein H5 OS=Dictyostelium discoideum GN=cinB PE=2 SV=2 11 296 6.0E-17
sp|Q8FK82|AES_ECOL6 Acetyl esterase OS=Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) GN=aes PE=3 SV=1 64 293 1.0E-16
sp|B7UKF6|AES_ECO27 Acetyl esterase OS=Escherichia coli O127:H6 (strain E2348/69 / EPEC) GN=aes PE=3 SV=1 64 293 1.0E-15
sp|B7MQJ1|AES_ECO81 Acetyl esterase OS=Escherichia coli O81 (strain ED1a) GN=aes PE=3 SV=1 64 293 1.0E-15
sp|Q9LK21|CXE11_ARATH Probable carboxylesterase 11 OS=Arabidopsis thaliana GN=CXE11 PE=2 SV=1 82 296 1.0E-15
sp|Q9FX94|CXE5_ARATH Probable carboxylesterase 5 OS=Arabidopsis thaliana GN=CXE5 PE=2 SV=1 28 274 1.0E-15
sp|P22760|AAAD_HUMAN Arylacetamide deacetylase OS=Homo sapiens GN=AADAC PE=1 SV=5 45 244 1.0E-15
sp|Q0TKG5|AES_ECOL5 Acetyl esterase OS=Escherichia coli O6:K15:H31 (strain 536 / UPEC) GN=aes PE=3 SV=1 64 293 2.0E-15
sp|Q9FX92|CXE3_ARATH Probable carboxylesterase 3 OS=Arabidopsis thaliana GN=CXE3 PE=2 SV=1 53 190 2.0E-15
sp|Q5VUY2|ADCL4_HUMAN Arylacetamide deacetylase-like 4 OS=Homo sapiens GN=AADACL4 PE=3 SV=1 57 301 2.0E-15
sp|Q325C0|AES_SHIBS Acetyl esterase OS=Shigella boydii serotype 4 (strain Sb227) GN=aes PE=3 SV=1 64 293 2.0E-15
sp|B7N929|AES_ECOLU Acetyl esterase OS=Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC) GN=aes PE=3 SV=1 64 293 3.0E-15
sp|P18773|EST_ACILW Esterase OS=Acinetobacter lwoffii GN=est PE=3 SV=2 67 287 3.0E-15
sp|B1LJN4|AES_ECOSM Acetyl esterase OS=Escherichia coli (strain SMS-3-5 / SECEC) GN=aes PE=3 SV=1 64 293 3.0E-15
sp|P23872|AES_ECOLI Acetyl esterase OS=Escherichia coli (strain K12) GN=aes PE=1 SV=3 64 293 3.0E-15
sp|B1XFR3|AES_ECODH Acetyl esterase OS=Escherichia coli (strain K12 / DH10B) GN=aes PE=3 SV=1 64 293 3.0E-15
sp|C4ZUT0|AES_ECOBW Acetyl esterase OS=Escherichia coli (strain K12 / MC4100 / BW2952) GN=aes PE=3 SV=1 64 293 3.0E-15
sp|B7NIF4|AES_ECO7I Acetyl esterase OS=Escherichia coli O7:K1 (strain IAI39 / ExPEC) GN=aes PE=3 SV=1 64 293 3.0E-15
sp|Q3Z4S3|AES_SHISS Acetyl esterase OS=Shigella sonnei (strain Ss046) GN=aes PE=3 SV=1 64 293 4.0E-15
sp|B7M3W8|AES_ECO8A Acetyl esterase OS=Escherichia coli O8 (strain IAI1) GN=aes PE=3 SV=1 64 293 4.0E-15
sp|A7ZXD4|AES_ECOHS Acetyl esterase OS=Escherichia coli O9:H4 (strain HS) GN=aes PE=3 SV=1 64 293 4.0E-15
sp|Q9LT10|CXE18_ARATH Probable carboxylesterase 18 OS=Arabidopsis thaliana GN=CXE18 PE=1 SV=1 46 290 4.0E-15
sp|B1IZB8|AES_ECOLC Acetyl esterase OS=Escherichia coli (strain ATCC 8739 / DSM 1576 / Crooks) GN=aes PE=3 SV=1 64 293 5.0E-15
sp|A7ZIN6|AES_ECO24 Acetyl esterase OS=Escherichia coli O139:H28 (strain E24377A / ETEC) GN=aes PE=3 SV=1 64 293 5.0E-15
sp|Q0ZPV7|CXE1_ACTER Carboxylesterase 1 OS=Actinidia eriantha GN=CXE1 PE=1 SV=1 46 177 6.0E-15
sp|B6I0B9|AES_ECOSE Acetyl esterase OS=Escherichia coli (strain SE11) GN=aes PE=3 SV=1 64 293 8.0E-15
sp|B7L7A1|AES_ECO55 Acetyl esterase OS=Escherichia coli (strain 55989 / EAEC) GN=aes PE=3 SV=1 64 293 8.0E-15
sp|Q8BM81|ADCL4_MOUSE Arylacetamide deacetylase-like 4 OS=Mus musculus GN=Aadacl4 PE=2 SV=2 57 280 8.0E-15
sp|Q9FX93|CXE4_ARATH Probable carboxylesterase 4 OS=Arabidopsis thaliana GN=CXE4 PE=2 SV=1 44 190 9.0E-15
sp|B2U4S9|AES_SHIB3 Acetyl esterase OS=Shigella boydii serotype 18 (strain CDC 3083-94 / BS512) GN=aes PE=3 SV=1 64 293 1.0E-14
sp|B5Z3Y7|AES_ECO5E Acetyl esterase OS=Escherichia coli O157:H7 (strain EC4115 / EHEC) GN=aes PE=3 SV=1 64 293 1.0E-14
sp|Q8XD38|AES_ECO57 Acetyl esterase OS=Escherichia coli O157:H7 GN=aes PE=3 SV=1 64 293 1.0E-14
sp|B4TMG8|AES_SALSV Acetyl esterase OS=Salmonella schwarzengrund (strain CVM19633) GN=aes PE=3 SV=1 68 293 1.0E-14
sp|B5BD42|AES_SALPK Acetyl esterase OS=Salmonella paratyphi A (strain AKU_12601) GN=aes PE=3 SV=1 68 293 1.0E-14
sp|Q57S73|AES_SALCH Acetyl esterase OS=Salmonella choleraesuis (strain SC-B67) GN=aes PE=3 SV=1 68 293 1.0E-14
sp|Q0T7A9|AES_SHIF8 Acetyl esterase OS=Shigella flexneri serotype 5b (strain 8401) GN=aes PE=3 SV=1 64 293 1.0E-14
sp|Q8ZRA1|AES_SALTY Acetyl esterase OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) GN=aes PE=1 SV=1 68 293 1.0E-14
sp|Q5PFJ2|AES_SALPA Acetyl esterase OS=Salmonella paratyphi A (strain ATCC 9150 / SARB42) GN=aes PE=3 SV=1 68 293 1.0E-14
sp|B4SWY4|AES_SALNS Acetyl esterase OS=Salmonella newport (strain SL254) GN=aes PE=3 SV=1 68 293 1.0E-14
sp|B5QU79|AES_SALEP Acetyl esterase OS=Salmonella enteritidis PT4 (strain P125109) GN=aes PE=3 SV=1 68 293 2.0E-14
sp|B5FLK0|AES_SALDC Acetyl esterase OS=Salmonella dublin (strain CT_02021853) GN=aes PE=3 SV=1 68 293 2.0E-14
sp|Q83M39|AES_SHIFL Acetyl esterase OS=Shigella flexneri GN=aes PE=3 SV=2 64 293 2.0E-14
sp|Q1RF59|AES_ECOUT Acetyl esterase OS=Escherichia coli (strain UTI89 / UPEC) GN=aes PE=3 SV=1 64 293 2.0E-14
sp|A1A8E2|AES_ECOK1 Acetyl esterase OS=Escherichia coli O1:K1 / APEC GN=aes PE=3 SV=1 64 293 2.0E-14
sp|B7MDZ8|AES_ECO45 Acetyl esterase OS=Escherichia coli O45:K1 (strain S88 / ExPEC) GN=aes PE=3 SV=1 64 293 2.0E-14
sp|B5EXN3|AES_SALA4 Acetyl esterase OS=Salmonella agona (strain SL483) GN=aes PE=3 SV=1 68 293 2.0E-14
sp|A9MW81|AES_SALPB Acetyl esterase OS=Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7) GN=aes PE=3 SV=1 68 293 3.0E-14
sp|Q8Z8T1|AES_SALTI Acetyl esterase OS=Salmonella typhi GN=aes PE=3 SV=1 68 293 3.0E-14
sp|Q9SMN0|CXE12_ARATH Probable carboxylesterase 12 OS=Arabidopsis thaliana GN=CXE12 PE=1 SV=1 44 277 3.0E-14
sp|Q9SX25|CXE6_ARATH Probable carboxylesterase 6 OS=Arabidopsis thaliana GN=CXE6 PE=2 SV=1 2 301 5.0E-14
sp|Q5NUF3|HIDH_SOYBN 2-hydroxyisoflavanone dehydratase OS=Glycine max GN=HIDH PE=1 SV=1 68 192 6.0E-14
sp|Q9SMM9|CXE13_ARATH Probable carboxylesterase 13 OS=Arabidopsis thaliana GN=CXE13 PE=1 SV=1 82 296 9.0E-14
sp|Q9ZQ91|CXE7_ARATH Probable carboxylesterase 7 OS=Arabidopsis thaliana GN=CXE7 PE=2 SV=1 67 284 1.0E-13
sp|Q00675|STCI_EMENI Putative sterigmatocystin biosynthesis lipase/esterase stcI OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=stcI PE=3 SV=1 68 290 1.0E-13
sp|O64641|CXE9_ARATH Probable carboxylesterase 9 OS=Arabidopsis thaliana GN=CXE9 PE=2 SV=1 51 181 3.0E-13
sp|Q9LVB8|CXE20_ARATH Probable carboxylesterase 120 OS=Arabidopsis thaliana GN=CXE20 PE=2 SV=1 51 178 3.0E-13
sp|Q9LMA7|CXE1_ARATH Probable carboxylesterase 1 OS=Arabidopsis thaliana GN=CXE1 PE=2 SV=1 67 205 5.0E-13
sp|Q5VUY0|ADCL3_HUMAN Arylacetamide deacetylase-like 3 OS=Homo sapiens GN=AADACL3 PE=2 SV=4 82 280 6.0E-13
sp|Q5NUF4|HIDM_GLYEC 2-hydroxyisoflavanone dehydratase OS=Glycyrrhiza echinata GN=HIDM PE=1 SV=1 46 182 8.0E-13
sp|Q9EX73|MLHB_RHOER Monoterpene epsilon-lactone hydrolase OS=Rhodococcus erythropolis GN=mlhB PE=1 SV=1 83 290 1.0E-12
sp|A2A7Z8|ADCL3_MOUSE Arylacetamide deacetylase-like 3 OS=Mus musculus GN=Aadacl3 PE=3 SV=1 57 311 6.0E-12
sp|I4DST8|TCEA1_TULGE Tuliposide A-converting enzyme 1, chloroplastic OS=Tulipa gesneriana GN=TCEA1 PE=1 SV=1 67 176 3.0E-11
sp|I4DST9|TCEA2_TULGE Tuliposide A-converting enzyme 2, chloroplastic OS=Tulipa gesneriana GN=TCEA2 PE=1 SV=1 67 176 3.0E-11
sp|Q9SX78|CXE2_ARATH Probable carboxylesterase 2 OS=Arabidopsis thaliana GN=CXE2 PE=2 SV=1 68 273 4.0E-11
sp|R4X4V6|TCEB2_TULGE Tuliposide A-converting enzyme b2, amyloplastic OS=Tulipa gesneriana GN=TCEA-B2 PE=1 SV=1 67 176 2.0E-10
sp|R4X244|TCEB1_TULGE Tuliposide A-converting enzyme b1, amyloplastic OS=Tulipa gesneriana GN=TCEA-B1 PE=1 SV=1 67 176 2.0E-10
sp|R4X247|TCEB4_TULGE Probable tuliposide A-converting enzyme b6, amyloplastic OS=Tulipa gesneriana GN=TCEA-B6 PE=2 SV=1 67 176 2.0E-10
sp|R4X5P0|TCEB3_TULGE Tuliposide A-converting enzyme b3, amyloplastic OS=Tulipa gesneriana GN=TCEA-B3 PE=1 SV=1 67 176 2.0E-10
sp|Q9R101|LIPS_ICTTR Hormone-sensitive lipase OS=Ictidomys tridecemlineatus GN=LIPE PE=2 SV=1 66 181 8.0E-08
sp|Q01109|BAH_STRHY Acetyl-hydrolase OS=Streptomyces hygroscopicus GN=bah PE=3 SV=3 83 163 1.0E-07
sp|Q9FG13|CXE15_ARATH Probable carboxylesterase 15 OS=Arabidopsis thaliana GN=CXE15 PE=2 SV=1 102 184 1.0E-07
sp|Q05469|LIPS_HUMAN Hormone-sensitive lipase OS=Homo sapiens GN=LIPE PE=1 SV=4 60 181 3.0E-07
sp|O06350|LIPF_MYCTU Carboxylesterase LipF OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) GN=lipF PE=1 SV=3 79 290 4.0E-07
sp|P14943|EST2_RABIT Liver carboxylesterase 2 OS=Oryctolagus cuniculus GN=CES2 PE=1 SV=2 39 167 1.0E-06
sp|P15304|LIPS_RAT Hormone-sensitive lipase OS=Rattus norvegicus GN=Lipe PE=1 SV=3 72 181 3.0E-06
sp|P37967|PNBA_BACSU Para-nitrobenzyl esterase OS=Bacillus subtilis (strain 168) GN=pnbA PE=1 SV=2 67 178 3.0E-06
sp|P12337|EST1_RABIT Liver carboxylesterase 1 OS=Oryctolagus cuniculus PE=1 SV=3 67 181 4.0E-06
sp|P16386|LIPS_BOVIN Hormone-sensitive lipase OS=Bos taurus GN=LIPE PE=1 SV=2 83 181 4.0E-06
sp|Q68J42|LIPS_PIG Hormone-sensitive lipase OS=Sus scrofa GN=LIPE PE=2 SV=1 72 181 4.0E-06
sp|P54310|LIPS_MOUSE Hormone-sensitive lipase OS=Mus musculus GN=Lipe PE=1 SV=2 83 181 7.0E-06
sp|P23141|EST1_HUMAN Liver carboxylesterase 1 OS=Homo sapiens GN=CES1 PE=1 SV=2 67 181 9.0E-06
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GO

GO Term Description Terminal node
GO:0008236 serine-type peptidase activity Yes
GO:0016787 hydrolase activity Yes
GO:0006508 proteolysis Yes
GO:1901564 organonitrogen compound metabolic process No
GO:0008152 metabolic process No
GO:0140096 catalytic activity, acting on a protein No
GO:0003674 molecular_function No
GO:0008233 peptidase activity No
GO:0019538 protein metabolic process No
GO:0006807 nitrogen compound metabolic process No
GO:0003824 catalytic activity No
GO:0008150 biological_process No
GO:0017171 serine hydrolase activity No
GO:0043170 macromolecule metabolic process No
GO:0071704 organic substance metabolic process No
GO:0044238 primary metabolic process No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 54 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Developmental stages of Agaricus bisporus (strain A15). Published in Pelkmans et al, Applied Microbiology and Biotechnology, 2016

Expression values

Label Description Expression (RPKM) Confidence interval (low) Confidence interval (high)
Casing Casing mycelium 45.83 25.74 65.92
Initials Initials knots 45.66 26.62 64.70
Pileal_Stipeal_center Stage I stipe center 8.29 3.74 12.85
Pileal_Stipeal_shell Stage I stipe shell 4.70 2.00 7.41
DIF_stipe_center Stage II stipe center 4.11 1.74 6.48
DIF_stipe_shell Stage II stipe shell 7.91 3.52 12.30
DIF_stipe_skin Stage II stipe skin 9.74 4.55 14.93
DIF_cap_skin Stage II cap skin 3.77 1.55 5.98
DIF_cap_tissue Stage II cap tissue 3.31 1.32 5.29
DIF_gill_tissue Stage II gill tissue 3.34 1.34 5.33
YFB_stipe_center Young fruiting body stipe center 8.83 4.13 13.54
YFB_stipe_shell Young fruiting body stipe shell 8.07 3.80 12.35
YFB_stipe_skin Young fruiting body stipe skin 7.71 3.56 11.85
YFB_cap_skin Young fruiting body cap skin 4.45 1.88 7.02
YFB_cap_tissue Young fruiting body cap tissue 1.08 0.27 1.88
YFB_gill_tissue Young fruiting body gill tissue 6.75 2.88 10.63
YFB_veil Young fruiting body veil 4.24 1.72 6.76

Differential expression

Label1 Label2 Q-value Significant difference
Casing DIF_gill_tissue 0.000613 yes
Casing YFB_stipe_center 0.000613 yes
Casing YFB_stipe_shell 0.000613 yes
Casing YFB_stipe_skin 0.000613 yes
Casing YFB_cap_skin 0.000613 yes
Casing YFB_cap_tissue 0.000613 yes
Casing YFB_gill_tissue 0.000613 yes
Casing YFB_veil 0.000613 yes
Casing Initials 0.995303 no
Casing Pileal_Stipeal_center 0.000613 yes
Casing Pileal_Stipeal_shell 0.000613 yes
Casing DIF_stipe_center 0.000613 yes
Casing DIF_stipe_shell 0.000613 yes
Casing DIF_stipe_skin 0.000613 yes
Casing DIF_cap_skin 0.000613 yes
Casing DIF_cap_tissue 0.000613 yes
DIF_gill_tissue YFB_stipe_center 0.009123 yes
DIF_gill_tissue YFB_stipe_shell 0.016104 yes
DIF_gill_tissue YFB_stipe_skin 0.024698 yes
DIF_gill_tissue YFB_cap_skin 0.602401 no
DIF_gill_tissue YFB_cap_tissue 0.015819 yes
DIF_gill_tissue YFB_gill_tissue 0.082633 no
DIF_gill_tissue YFB_veil 0.693037 no
YFB_stipe_center YFB_stipe_shell 0.889985 no
YFB_stipe_center YFB_stipe_skin 0.827049 no
YFB_stipe_center YFB_cap_skin 0.066022 no
YFB_stipe_center YFB_cap_tissue 0.000613 yes
YFB_stipe_center YFB_gill_tissue 0.608460 no
YFB_stipe_center YFB_veil 0.054170 no
YFB_stipe_shell YFB_stipe_skin 0.949062 no
YFB_stipe_shell YFB_cap_skin 0.121717 no
YFB_stipe_shell YFB_cap_tissue 0.000613 yes
YFB_stipe_shell YFB_gill_tissue 0.761505 no
YFB_stipe_shell YFB_veil 0.096942 no
YFB_stipe_skin YFB_cap_skin 0.183181 no
YFB_stipe_skin YFB_cap_tissue 0.000613 yes
YFB_stipe_skin YFB_gill_tissue 0.841810 no
YFB_stipe_skin YFB_veil 0.143758 no
YFB_cap_skin YFB_cap_tissue 0.002084 yes
YFB_cap_skin YFB_gill_tissue 0.369531 no
YFB_cap_skin YFB_veil 0.952238 no
YFB_cap_tissue YFB_gill_tissue 0.000613 yes
YFB_cap_tissue YFB_veil 0.001140 yes
YFB_gill_tissue YFB_veil 0.321351 no
Initials DIF_gill_tissue 0.000613 yes
Initials YFB_stipe_center 0.000613 yes
Initials YFB_stipe_shell 0.000613 yes
Initials YFB_stipe_skin 0.000613 yes
Initials YFB_cap_skin 0.000613 yes
Initials YFB_cap_tissue 0.000613 yes
Initials YFB_gill_tissue 0.000613 yes
Initials YFB_veil 0.000613 yes
Initials Pileal_Stipeal_center 0.000613 yes
Initials Pileal_Stipeal_shell 0.000613 yes
Initials DIF_stipe_center 0.000613 yes
Initials DIF_stipe_shell 0.000613 yes
Initials DIF_stipe_skin 0.000613 yes
Initials DIF_cap_skin 0.000613 yes
Initials DIF_cap_tissue 0.000613 yes
Pileal_Stipeal_center DIF_gill_tissue 0.017783 yes
Pileal_Stipeal_center YFB_stipe_center 0.930116 no
Pileal_Stipeal_center YFB_stipe_shell 0.970559 no
Pileal_Stipeal_center YFB_stipe_skin 0.919387 no
Pileal_Stipeal_center YFB_cap_skin 0.116118 no
Pileal_Stipeal_center YFB_cap_tissue 0.000613 yes
Pileal_Stipeal_center YFB_gill_tissue 0.729518 no
Pileal_Stipeal_center YFB_veil 0.089641 no
Pileal_Stipeal_center Pileal_Stipeal_shell 0.155834 no
Pileal_Stipeal_center DIF_stipe_center 0.066395 no
Pileal_Stipeal_center DIF_stipe_shell 0.948976 no
Pileal_Stipeal_center DIF_stipe_skin 0.784224 no
Pileal_Stipeal_center DIF_cap_skin 0.032742 yes
Pileal_Stipeal_center DIF_cap_tissue 0.016104 yes
Pileal_Stipeal_shell DIF_gill_tissue 0.497077 no
Pileal_Stipeal_shell YFB_stipe_center 0.100086 no
Pileal_Stipeal_shell YFB_stipe_shell 0.170359 no
Pileal_Stipeal_shell YFB_stipe_skin 0.240931 no
Pileal_Stipeal_shell YFB_cap_skin 0.939857 no
Pileal_Stipeal_shell YFB_cap_tissue 0.001140 yes
Pileal_Stipeal_shell YFB_gill_tissue 0.461664 no
Pileal_Stipeal_shell YFB_veil 0.883249 no
Pileal_Stipeal_shell DIF_stipe_center 0.838503 no
Pileal_Stipeal_shell DIF_stipe_shell 0.203400 no
Pileal_Stipeal_shell DIF_stipe_skin 0.046536 yes
Pileal_Stipeal_shell DIF_cap_skin 0.699679 no
Pileal_Stipeal_shell DIF_cap_tissue 0.488685 no
DIF_stipe_center DIF_gill_tissue 0.734225 no
DIF_stipe_center YFB_stipe_center 0.035993 yes
DIF_stipe_center YFB_stipe_shell 0.072685 no
DIF_stipe_center YFB_stipe_skin 0.111025 no
DIF_stipe_center YFB_cap_skin 0.912330 no
DIF_stipe_center YFB_cap_tissue 0.004548 yes
DIF_stipe_center YFB_gill_tissue 0.264930 no
DIF_stipe_center YFB_veil 0.968417 no
DIF_stipe_center DIF_stipe_shell 0.087755 no
DIF_stipe_center DIF_stipe_skin 0.014956 yes
DIF_stipe_center DIF_cap_skin 0.904724 no
DIF_stipe_center DIF_cap_tissue 0.721138 no
DIF_stipe_shell DIF_gill_tissue 0.022631 yes
DIF_stipe_shell YFB_stipe_center 0.864881 no
DIF_stipe_shell YFB_stipe_shell 0.977303 no
DIF_stipe_shell YFB_stipe_skin 0.971478 no
DIF_stipe_shell YFB_cap_skin 0.143342 no
DIF_stipe_shell YFB_cap_tissue 0.000613 yes
DIF_stipe_shell YFB_gill_tissue 0.798299 no
DIF_stipe_shell YFB_veil 0.115496 no
DIF_stipe_shell DIF_stipe_skin 0.693037 no
DIF_stipe_shell DIF_cap_skin 0.038942 yes
DIF_stipe_shell DIF_cap_tissue 0.021056 yes
DIF_stipe_skin DIF_gill_tissue 0.003365 yes
DIF_stipe_skin YFB_stipe_center 0.879571 no
DIF_stipe_skin YFB_stipe_shell 0.717979 no
DIF_stipe_skin YFB_stipe_skin 0.647034 no
DIF_stipe_skin YFB_cap_skin 0.029408 yes
DIF_stipe_skin YFB_cap_tissue 0.000613 yes
DIF_stipe_skin YFB_gill_tissue 0.424283 no
DIF_stipe_skin YFB_veil 0.023415 yes
DIF_stipe_skin DIF_cap_skin 0.007092 yes
DIF_stipe_skin DIF_cap_tissue 0.001140 yes
DIF_cap_skin DIF_gill_tissue 0.863102 no
DIF_cap_skin YFB_stipe_center 0.016949 yes
DIF_cap_skin YFB_stipe_shell 0.034377 yes
DIF_cap_skin YFB_stipe_skin 0.056760 no
DIF_cap_skin YFB_cap_skin 0.793146 no
DIF_cap_skin YFB_cap_tissue 0.006742 yes
DIF_cap_skin YFB_gill_tissue 0.158774 no
DIF_cap_skin YFB_veil 0.867319 no
DIF_cap_skin DIF_cap_tissue 0.850950 no
DIF_cap_tissue DIF_gill_tissue 0.990353 no
DIF_cap_tissue YFB_stipe_center 0.008791 yes
DIF_cap_tissue YFB_stipe_shell 0.014668 yes
DIF_cap_tissue YFB_stipe_skin 0.023933 yes
DIF_cap_tissue YFB_cap_skin 0.585714 no
DIF_cap_tissue YFB_cap_tissue 0.017226 yes
DIF_cap_tissue YFB_gill_tissue 0.080179 no
DIF_cap_tissue YFB_veil 0.675537 no

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >AgabiH97|051440
MSIHPSVVDKLDPEYVAFHNAYIKDHVVPAETLPWDPKIREGPSVPGTSEPLEVASIKDYDLSEARIRVFTPKGE
RPAGGWPVLIWFHGGGWTLGNISSDTSFATQMVNAANCVAVSVDYRLAPENKYPAAVEDAIEALDWVLSKGPTEI
NINPSRISVGGSSSGGNIAAILSLKAAERNVPLVSQLLIVPVADNTASVDDLWAENQHTPWLTPARMNWFKNNYL
PNKEDWTKWDASPTFAPVELLGQTPKAFIAVCEMDILKNEGFAYGEKLRMAGVEVETVIYPGAPHPIMAMDGAYL
SCLLISILTDMAKPSKCSRGSRSWQKVSARCGKGLISSLVHHSLIPRGFADVAPKHASQESGKRVVLDLSVLVSK
AKYPSPGSSKCRI*
Coding >AgabiH97|051440
ATGTCGATACATCCTTCAGTTGTCGATAAGCTCGATCCGGAATACGTGGCCTTTCATAACGCTTACATCAAAGAT
CATGTCGTTCCAGCCGAAACTTTGCCGTGGGATCCCAAAATCCGCGAAGGACCTAGCGTACCTGGAACTTCAGAA
CCTTTGGAAGTTGCTAGTATCAAAGATTACGATCTTTCCGAAGCAAGAATTCGTGTGTTCACTCCAAAAGGCGAA
CGTCCTGCCGGAGGATGGCCCGTACTCATTTGGTTCCACGGCGGAGGTTGGACTCTCGGAAATATATCTTCTGAT
ACCTCGTTCGCGACTCAGATGGTTAACGCGGCGAATTGCGTTGCGGTCTCCGTAGACTACCGCCTTGCACCAGAA
AACAAATATCCTGCTGCTGTCGAAGACGCAATTGAAGCTTTAGACTGGGTCTTGTCCAAGGGACCTACCGAAATT
AACATCAATCCCTCCCGTATTTCTGTGGGCGGCTCTTCAAGCGGCGGAAATATAGCGGCCATCCTCAGCCTTAAA
GCCGCTGAGCGAAATGTTCCTTTGGTGTCGCAATTATTGATTGTTCCAGTCGCTGATAACACAGCATCTGTTGAT
GACCTTTGGGCAGAGAACCAGCATACTCCGTGGCTAACCCCCGCCAGGATGAACTGGTTCAAGAACAATTACCTG
CCAAACAAAGAAGATTGGACGAAATGGGATGCCTCACCAACGTTTGCCCCTGTTGAGCTCCTGGGACAGACACCG
AAGGCATTCATTGCAGTGTGTGAGATGGATATCCTTAAAAATGAAGGGTTTGCATACGGAGAGAAACTAAGAATG
GCCGGAGTGGAAGTTGAGACTGTAATCTACCCTGGCGCCCCACACCCAATCATGGCAATGGATGGTGCGTACTTG
TCTTGCCTTCTCATTAGTATATTGACAGACATGGCTAAACCTTCGAAATGCTCCAGGGGTTCTCGAAGTTGGCAG
AAAGTTAGTGCGCGATGCGGGAAGGGCCTTATCTCAAGCCTTGTCCATCACTCCCTGATCCCTCGAGGTTTTGCT
GATGTGGCGCCCAAACACGCTTCGCAAGAGTCGGGGAAGCGCGTCGTACTAGATTTGAGTGTCCTCGTATCGAAA
GCAAAATATCCTTCACCGGGCTCTTCCAAATGTCGCATTTGA
Transcript >AgabiH97|051440
ATGTCGATACATCCTTCAGTTGTCGATAAGCTCGATCCGGAATACGTGGCCTTTCATAACGCTTACATCAAAGAT
CATGTCGTTCCAGCCGAAACTTTGCCGTGGGATCCCAAAATCCGCGAAGGACCTAGCGTACCTGGAACTTCAGAA
CCTTTGGAAGTTGCTAGTATCAAAGATTACGATCTTTCCGAAGCAAGAATTCGTGTGTTCACTCCAAAAGGCGAA
CGTCCTGCCGGAGGATGGCCCGTACTCATTTGGTTCCACGGCGGAGGTTGGACTCTCGGAAATATATCTTCTGAT
ACCTCGTTCGCGACTCAGATGGTTAACGCGGCGAATTGCGTTGCGGTCTCCGTAGACTACCGCCTTGCACCAGAA
AACAAATATCCTGCTGCTGTCGAAGACGCAATTGAAGCTTTAGACTGGGTCTTGTCCAAGGGACCTACCGAAATT
AACATCAATCCCTCCCGTATTTCTGTGGGCGGCTCTTCAAGCGGCGGAAATATAGCGGCCATCCTCAGCCTTAAA
GCCGCTGAGCGAAATGTTCCTTTGGTGTCGCAATTATTGATTGTTCCAGTCGCTGATAACACAGCATCTGTTGAT
GACCTTTGGGCAGAGAACCAGCATACTCCGTGGCTAACCCCCGCCAGGATGAACTGGTTCAAGAACAATTACCTG
CCAAACAAAGAAGATTGGACGAAATGGGATGCCTCACCAACGTTTGCCCCTGTTGAGCTCCTGGGACAGACACCG
AAGGCATTCATTGCAGTGTGTGAGATGGATATCCTTAAAAATGAAGGGTTTGCATACGGAGAGAAACTAAGAATG
GCCGGAGTGGAAGTTGAGACTGTAATCTACCCTGGCGCCCCACACCCAATCATGGCAATGGATGGTGCGTACTTG
TCTTGCCTTCTCATTAGTATATTGACAGACATGGCTAAACCTTCGAAATGCTCCAGGGGTTCTCGAAGTTGGCAG
AAAGTTAGTGCGCGATGCGGGAAGGGCCTTATCTCAAGCCTTGTCCATCACTCCCTGATCCCTCGAGGTTTTGCT
GATGTGGCGCCCAAACACGCTTCGCAAGAGTCGGGGAAGCGCGTCGTACTAGATTTGAGTGTCCTCGTATCGAAA
GCAAAATATCCTTCACCGGGCTCTTCCAAATGTCGCATTTGA
Gene >AgabiH97|051440
ATGTCGATACATCCTTCAGTTGTCGATAAGCTCGATCCGGAATACGTGGCCTTTCATAACGCTTACATCAAAGAT
CATGTCGTTCCAGCCGAAACTTTGCCGTGGGATCCCAAAATCCGCGAAGGACCTAGCGTACCTGGAACTTCAGAA
CCTTTGGAAGTTGCTAGTATCAAAGATTACGATCTTTCCGAAGCAAGAATTCGTGTGTTCACTCCAAAAGGCGAA
CGTCCTGCCGGAGGATGGCCCGTACTCATTTGGTTCCACGGCGGTCTGTATCAGTGATCTCATGAGTCCTTAACG
TCAACTGATATTCTATATAGGAGGTTGGACTCTCGGAAATATATCTTCTGATACCTCGTTCGCGACTCAGATGGT
TAACGGTAGGTCAAGCCGTACCTTGTCCGTCCTCCACTTCGTCCCTGATATTTTACTCTAGCGGCGAATTGCGTT
GCGGTCTCCGTAGACTACCGCCTTGCACCAGAAAACAAATATCCTGCTGCTGTCGAAGACGCAATTGAAGCTTTA
GACTGGGTCTTGTCCAAGGGACCTACCGAAATTAACATCAATCCCTCCCGTATTTCTGTGGGCGGCTCTTCAAGG
TTAAATTACTCGTTCTGTATCTCTTTCGTTTCGCTTATAATCGACCGACAGCGGCGGAAATATAGCGGCCATCCT
CAGCCTTAAAGCCGCTGAGCGAAATGTTCCTTTGGTGTCGCAATTATTGATTGTTCCAGTCGCTGATAACACAGC
ATCTGTTGATGACCTTTGGGCAGAGAACCAGCATACTCCGTGGCTAACCCCCGCCAGGATGAACTGGTTCAAGAA
CAATTACCTGCCAAACAAAGAAGATTGGACGAAATGGGATGCCTCACCAACGTTTGCCCCTGTTGAGCTCCTGGG
ACAGACACCGAAGGCATTCATTGCAGTGTGTGAGATGGATATCCTTAAAAATGAAGGGTTTGCATACGGAGAGAA
ACTAAGAATGGCCGGAGTGGAAGTTGAGACTGTAATCTACCCTGGCGCCCCACACCCAATCATGGCAATGGATGG
TGCGTACTTGTCTTGCCTTCTCATTAGTATATTGACAGACATGGCTAAACCTTCGAAATGCTCCAGGGTGAGTAG
TGTTCTGACCCCCAGGTATGCATCAACTAAATTTGTATAGGGTTCTCGAAGTTGGCAGAAAGTTAGTGCGCGATG
CGGGAAGGGCCTTATCTCAAGCCTTGTCCATCACTCCCTGATCCCTCGAGGTTTTGCTGATGTGGCGCCCAAACA
CGGTACATCATCTCACGCGCAGACAGTTGTCGTTTACATCCAACACAACCCTCCTCTAGCTTCGCAAGAGTCGGG
GAAGCGCGTCGTACTAGATTTGAGTGTCCTCGTATCGAAAGCAAAATATCCTTCACCGGGCTCTTCCAAATGTCG
CATTTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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