Fungal Genomics

at Utrecht University

General Properties

Protein ID	AgabiH97\|051200
Gene name
Location	scaffold_2:3169284..3169791
Strand	+
Gene length (bp)	507
Transcript length (bp)	507
Coding sequence length (bp)	507
Protein length (aa)	169

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF00651	BTB	BTB/POZ domain	4.9E-07	20	126

Swissprot hits

(None)

GO

GO Term	Description	Terminal node
GO:0005515	protein binding	Yes
GO:0005488	binding	No
GO:0003674	molecular_function	No

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 20	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Developmental stages of Agaricus bisporus (strain A15). Published in Pelkmans et al, Applied Microbiology and Biotechnology, 2016

Click here for more information

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>AgabiH97\|051200 MQAITESFTPVSKDIFIRGADIVFMTNDGTKFHVHSYFFTRESIYWQQKLTGHNEPHHPLSKRYTSNDPYLIQDV DSHDFRKFLRVFYNTRYGDYSFFSNLDWVDIFSIAHKWDFPQVKILSKRYLGQMGYGVVERTCGVHCTRIVDDEM IDRSYPHQVYLISCGHEI*
Coding	>AgabiH97\|051200 ATGCAAGCCATTACCGAATCTTTTACACCTGTTTCAAAAGACATCTTTATCCGTGGAGCCGACATTGTATTCATG ACCAACGACGGAACCAAATTCCACGTCCACTCCTACTTCTTCACTCGCGAATCTATCTATTGGCAACAAAAACTC ACTGGCCATAACGAACCTCACCATCCTTTATCCAAACGCTATACATCAAACGATCCCTACCTCATCCAAGACGTA GACTCCCATGATTTTCGAAAATTTCTCCGTGTGTTCTATAATACACGATATGGCGATTACTCTTTCTTTTCCAAC CTCGACTGGGTCGACATCTTTTCTATTGCGCATAAATGGGATTTTCCACAAGTCAAAATTCTTTCCAAACGTTAT CTTGGACAAATGGGCTATGGAGTTGTTGAACGAACTTGTGGAGTTCACTGTACTCGAATCGTTGACGACGAAATG ATTGACCGTTCTTATCCTCATCAAGTCTATCTTATTTCGTGTGGACACGAAATCTGA
Transcript	>AgabiH97\|051200 ATGCAAGCCATTACCGAATCTTTTACACCTGTTTCAAAAGACATCTTTATCCGTGGAGCCGACATTGTATTCATG ACCAACGACGGAACCAAATTCCACGTCCACTCCTACTTCTTCACTCGCGAATCTATCTATTGGCAACAAAAACTC ACTGGCCATAACGAACCTCACCATCCTTTATCCAAACGCTATACATCAAACGATCCCTACCTCATCCAAGACGTA GACTCCCATGATTTTCGAAAATTTCTCCGTGTGTTCTATAATACACGATATGGCGATTACTCTTTCTTTTCCAAC CTCGACTGGGTCGACATCTTTTCTATTGCGCATAAATGGGATTTTCCACAAGTCAAAATTCTTTCCAAACGTTAT CTTGGACAAATGGGCTATGGAGTTGTTGAACGAACTTGTGGAGTTCACTGTACTCGAATCGTTGACGACGAAATG ATTGACCGTTCTTATCCTCATCAAGTCTATCTTATTTCGTGTGGACACGAAATCTGA
Gene	>AgabiH97\|051200 ATGCAAGCCATTACCGAATCTTTTACACCTGTTTCAAAAGACATCTTTATCCGTGGAGCCGACATTGTATTCATG ACCAACGACGGAACCAAATTCCACGTCCACTCCTACTTCTTCACTCGCGAATCTATCTATTGGCAACAAAAACTC ACTGGCCATAACGAACCTCACCATCCTTTATCCAAACGCTATACATCAAACGATCCCTACCTCATCCAAGACGTA GACTCCCATGATTTTCGAAAATTTCTCCGTGTGTTCTATAATACACGATATGGCGATTACTCTTTCTTTTCCAAC CTCGACTGGGTCGACATCTTTTCTATTGCGCATAAATGGGATTTTCCACAAGTCAAAATTCTTTCCAAACGTTAT CTTGGACAAATGGGCTATGGAGTTGTTGAACGAACTTGTGGAGTTCACTGTACTCGAATCGTTGACGACGAAATG ATTGACCGTTCTTATCCTCATCAAGTCTATCTTATTTCGTGTGGACACGAAATCTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail