Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabiH97|050210
Gene name
Locationscaffold_2:2873953..2876247
Strand-
Gene length (bp)2294
Transcript length (bp)1485
Coding sequence length (bp)1485
Protein length (aa) 495

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF07690 MFS_1 Major Facilitator Superfamily 9.9E-29 52 419

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|Q9US37|YFZ4_SCHPO Uncharacterized transporter C1039.04 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1039.04 PE=3 SV=1 31 494 9.0E-61
sp|Q9US44|YIZG_SCHPO Uncharacterized transporter C1002.16c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1002.16c PE=3 SV=1 35 466 5.0E-57
sp|Q9P6J0|YHDC_SCHPO Uncharacterized transporter C1683.12 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC1683.12 PE=3 SV=1 31 494 4.0E-56
sp|Q10097|YAOI_SCHPO Uncharacterized transporter C11D3.18C OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC11D3.18c PE=3 SV=1 30 494 2.0E-55
sp|P53322|TNA1_YEAST High-affinity nicotinic acid transporter OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TNA1 PE=1 SV=1 36 492 8.0E-51
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Swissprot ID Swissprot Description Start End E-value
sp|Q9US37|YFZ4_SCHPO Uncharacterized transporter C1039.04 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1039.04 PE=3 SV=1 31 494 9.0E-61
sp|Q9US44|YIZG_SCHPO Uncharacterized transporter C1002.16c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1002.16c PE=3 SV=1 35 466 5.0E-57
sp|Q9P6J0|YHDC_SCHPO Uncharacterized transporter C1683.12 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC1683.12 PE=3 SV=1 31 494 4.0E-56
sp|Q10097|YAOI_SCHPO Uncharacterized transporter C11D3.18C OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC11D3.18c PE=3 SV=1 30 494 2.0E-55
sp|P53322|TNA1_YEAST High-affinity nicotinic acid transporter OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TNA1 PE=1 SV=1 36 492 8.0E-51
sp|O94491|YC7A_SCHPO Uncharacterized transporter C417.10 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC417.10 PE=3 SV=1 13 494 1.0E-45
sp|P15365|DAL5_YEAST Allantoate permease OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=DAL5 PE=1 SV=1 15 494 4.0E-40
sp|O94572|YGDF_SCHPO Uncharacterized transporter C1773.15 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC1773.15 PE=3 SV=1 2 494 5.0E-33
sp|P40445|YIQ6_YEAST Uncharacterized transporter YIL166C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YIL166C PE=1 SV=1 36 492 7.0E-31
sp|Q44470|TUB4_AGRVI Putative tartrate transporter OS=Agrobacterium vitis GN=ttuB PE=2 SV=1 36 389 1.0E-28
sp|P76470|RHMT_ECOLI Inner membrane transport protein RhmT OS=Escherichia coli (strain K12) GN=rhmT PE=1 SV=2 31 306 3.0E-27
sp|O74923|YJ7D_SCHPO Uncharacterized transporter C757.13 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC757.13 PE=3 SV=1 2 493 4.0E-27
sp|P70786|TUB3_AGRVI Putative tartrate transporter OS=Agrobacterium vitis GN=ttuB PE=2 SV=1 36 255 1.0E-26
sp|O43000|LIZ1_SCHPO Pantothenate transporter liz1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=liz1 PE=2 SV=2 36 257 4.0E-25
sp|P25621|FEN2_YEAST Pantothenate transporter FEN2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=FEN2 PE=1 SV=1 10 465 7.0E-25
sp|Q07904|THI73_YEAST Thiamine pathway transporter THI73 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=THI73 PE=1 SV=1 29 485 8.0E-25
sp|P39709|SEO1_YEAST Probable transporter SEO1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SEO1 PE=1 SV=1 36 463 2.0E-22
sp|Q88FY6|NICT_PSEPK Putative metabolite transport protein NicT OS=Pseudomonas putida (strain KT2440) GN=nicT PE=2 SV=1 29 277 5.0E-21
sp|B5BP49|YP55_SCHPO Uncharacterized transporter C460.05 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC460.05 PE=3 SV=1 30 492 2.0E-19
sp|O13880|VHT1_SCHPO Vitamin H transporter 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=vht1 PE=2 SV=1 37 483 4.0E-18
sp|Q05181|PHT1_PSEPU Phthalate transporter OS=Pseudomonas putida GN=pht1 PE=3 SV=1 37 336 1.0E-13
sp|Q9C0V8|YHJ1_SCHPO Uncharacterized transporter PB10D8.01 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBPB10D8.01 PE=3 SV=1 22 264 1.0E-13
sp|Q9C0U9|YQD3_SCHPO Uncharacterized transporter PB1C11.03 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCPB1C11.03 PE=1 SV=1 22 276 1.0E-12
sp|O13879|YE1F_SCHPO Uncharacterized transporter C1B3.15C OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1B3.15c PE=3 SV=1 11 470 5.0E-12
sp|P53241|VHT1_YEAST Vitamin H transporter OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=VHT1 PE=1 SV=1 27 483 6.0E-12
sp|Q12235|YCT1_YEAST High affinity cysteine transporter OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YCT1 PE=1 SV=1 30 277 2.0E-10
sp|P0CF20|YO163_YEAST Putative uncharacterized transporter YOL163W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YOL163W PE=5 SV=1 141 259 5.0E-09
sp|P0AA76|DGOT_ECOLI D-galactonate transporter OS=Escherichia coli (strain K12) GN=dgoT PE=1 SV=1 33 272 5.0E-06
sp|P0AA77|DGOT_ECOL6 D-galactonate transporter OS=Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) GN=dgoT PE=3 SV=1 33 272 5.0E-06
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GO

GO Term Description Terminal node
GO:0055085 transmembrane transport Yes
GO:0022857 transmembrane transporter activity Yes
GO:0051179 localization No
GO:0003674 molecular_function No
GO:0051234 establishment of localization No
GO:0008150 biological_process No
GO:0009987 cellular process No
GO:0005215 transporter activity No
GO:0006810 transport No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 70 0.5

Transmembrane Domains

Domain # Start End Length
1 45 64 19
2 84 106 22
3 109 131 22
4 137 159 22
5 172 194 22
6 209 228 19
7 274 296 22
8 316 338 22
9 345 363 18
10 368 390 22
11 402 424 22
12 434 456 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Developmental stages of Agaricus bisporus (strain A15). Published in Pelkmans et al, Applied Microbiology and Biotechnology, 2016

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >AgabiH97|050210
MERNAAPRDLKEDIEVKHVDALVESPPLEEIDPVAERKLVRKLDLILLPMFCLIYCVSFVDRTAVGNAKIAGLEA
DLGMKGLDFNIALTVFYICFTAIEVPSNLILKRVGSIWVAYLVLTFGAVALGSAFMKTYAHMLVTRVFLGIAEGG
TLAGLVYTLARFYRRKELVLRMGFFFGIAASLSGAFGGLLASGLLSIRDFGAIKSWRKIFFVEGIITISIGLCLL
VVMPEDPRKTRMLNESERAMAIARINADAAVKVDGRKEKSTWKLVLRSFNIWTSVCAVGYLFVNISFQGLSLFLP
TVINSLGNFPVVESQLRTVPCFLVGAVWSVCLCYASLWLDNRGTMVIASMVSQIVGYAIAIGTENPHARYAGCFL
TVMGGTSSGPLLFTWGIDNAAPDTMRAIAAALIPGIGALGSIIAVWTYLPGDAPNFRTGNSINLTAGIAVIVFVS
IGMLYLRHENRKRDQGGRDYRLEGKTEEEIRDLGYRHPDFRYQL*
Coding >AgabiH97|050210
ATGGAAAGGAATGCTGCCCCAAGGGACTTGAAAGAGGATATTGAGGTCAAACATGTCGATGCTCTAGTCGAGAGT
CCGCCACTGGAGGAAATTGACCCGGTTGCCGAGAGAAAGCTTGTGCGCAAACTAGATCTCATCTTGCTACCGATG
TTTTGCTTGATCTATTGCGTGAGTTTCGTTGACAGGACTGCTGTTGGTAACGCCAAAATTGCAGGTCTCGAAGCG
GATCTTGGCATGAAAGGACTCGACTTCAATATCGCGCTGACAGTGTTCTACATCTGTTTCACTGCCATCGAAGTA
CCATCAAATCTAATTCTCAAACGAGTCGGCTCCATATGGGTCGCATACTTAGTCCTTACATTCGGGGCGGTAGCT
TTAGGGTCTGCTTTCATGAAAACCTATGCGCATATGCTGGTGACAAGGGTATTTTTGGGAATTGCAGAAGGCGGA
ACACTGGCTGGACTTGTTTACACTTTGGCGCGGTTCTACCGTCGCAAAGAACTTGTCCTCCGTATGGGATTCTTT
TTCGGAATCGCCGCAAGTCTTTCAGGAGCATTCGGGGGTCTTCTTGCTTCAGGACTCTTGAGTATCCGAGATTTT
GGTGCGATCAAAAGTTGGAGGAAGATCTTTTTCGTTGAGGGTATTATCACCATCAGCATTGGTCTTTGTTTGTTG
GTCGTCATGCCAGAGGACCCACGTAAAACAAGAATGTTGAACGAGTCCGAGCGAGCAATGGCAATCGCTAGGATC
AATGCTGATGCGGCAGTCAAAGTTGACGGAAGAAAAGAAAAGTCAACTTGGAAACTCGTCCTGCGCTCTTTTAAT
ATCTGGACGTCCGTGTGCGCAGTGGGATACCTTTTCGTTAACATTTCGTTTCAGGGATTGAGCTTGTTTTTGCCG
ACTGTGATAAACTCGCTGGGCAATTTCCCCGTTGTGGAGTCTCAACTAAGGACGGTTCCATGTTTTCTCGTTGGC
GCAGTTTGGTCTGTTTGCCTCTGCTACGCTAGTTTGTGGCTGGATAACCGAGGCACTATGGTCATCGCTTCTATG
GTCTCCCAAATAGTGGGATATGCTATTGCGATCGGTACCGAAAATCCTCATGCACGTTATGCTGGTTGTTTCTTG
ACTGTCATGGGAGGAACATCTTCTGGTCCTTTGCTCTTCACCTGGGGTATAGATAATGCAGCCCCCGATACTATG
CGAGCGATCGCGGCAGCCCTCATTCCTGGGATTGGTGCCCTAGGTTCAATCATTGCTGTCTGGACATACCTTCCT
GGTGACGCACCGAACTTTCGTACAGGGAACTCCATCAATCTTACAGCTGGAATTGCGGTTATTGTGTTTGTTTCA
ATCGGCATGTTGTATTTGCGACACGAAAATAGGAAGCGGGATCAAGGTGGAAGGGACTACCGGTTGGAGGGGAAG
ACTGAGGAAGAGATTAGAGATTTGGGTTATAGGCACCCTGATTTCCGCTACCAATTATGA
Transcript >AgabiH97|050210
ATGGAAAGGAATGCTGCCCCAAGGGACTTGAAAGAGGATATTGAGGTCAAACATGTCGATGCTCTAGTCGAGAGT
CCGCCACTGGAGGAAATTGACCCGGTTGCCGAGAGAAAGCTTGTGCGCAAACTAGATCTCATCTTGCTACCGATG
TTTTGCTTGATCTATTGCGTGAGTTTCGTTGACAGGACTGCTGTTGGTAACGCCAAAATTGCAGGTCTCGAAGCG
GATCTTGGCATGAAAGGACTCGACTTCAATATCGCGCTGACAGTGTTCTACATCTGTTTCACTGCCATCGAAGTA
CCATCAAATCTAATTCTCAAACGAGTCGGCTCCATATGGGTCGCATACTTAGTCCTTACATTCGGGGCGGTAGCT
TTAGGGTCTGCTTTCATGAAAACCTATGCGCATATGCTGGTGACAAGGGTATTTTTGGGAATTGCAGAAGGCGGA
ACACTGGCTGGACTTGTTTACACTTTGGCGCGGTTCTACCGTCGCAAAGAACTTGTCCTCCGTATGGGATTCTTT
TTCGGAATCGCCGCAAGTCTTTCAGGAGCATTCGGGGGTCTTCTTGCTTCAGGACTCTTGAGTATCCGAGATTTT
GGTGCGATCAAAAGTTGGAGGAAGATCTTTTTCGTTGAGGGTATTATCACCATCAGCATTGGTCTTTGTTTGTTG
GTCGTCATGCCAGAGGACCCACGTAAAACAAGAATGTTGAACGAGTCCGAGCGAGCAATGGCAATCGCTAGGATC
AATGCTGATGCGGCAGTCAAAGTTGACGGAAGAAAAGAAAAGTCAACTTGGAAACTCGTCCTGCGCTCTTTTAAT
ATCTGGACGTCCGTGTGCGCAGTGGGATACCTTTTCGTTAACATTTCGTTTCAGGGATTGAGCTTGTTTTTGCCG
ACTGTGATAAACTCGCTGGGCAATTTCCCCGTTGTGGAGTCTCAACTAAGGACGGTTCCATGTTTTCTCGTTGGC
GCAGTTTGGTCTGTTTGCCTCTGCTACGCTAGTTTGTGGCTGGATAACCGAGGCACTATGGTCATCGCTTCTATG
GTCTCCCAAATAGTGGGATATGCTATTGCGATCGGTACCGAAAATCCTCATGCACGTTATGCTGGTTGTTTCTTG
ACTGTCATGGGAGGAACATCTTCTGGTCCTTTGCTCTTCACCTGGGGTATAGATAATGCAGCCCCCGATACTATG
CGAGCGATCGCGGCAGCCCTCATTCCTGGGATTGGTGCCCTAGGTTCAATCATTGCTGTCTGGACATACCTTCCT
GGTGACGCACCGAACTTTCGTACAGGGAACTCCATCAATCTTACAGCTGGAATTGCGGTTATTGTGTTTGTTTCA
ATCGGCATGTTGTATTTGCGACACGAAAATAGGAAGCGGGATCAAGGTGGAAGGGACTACCGGTTGGAGGGGAAG
ACTGAGGAAGAGATTAGAGATTTGGGTTATAGGCACCCTGATTTCCGCTACCAATTATGA
Gene >AgabiH97|050210
ATGGAAAGGAATGCTGCCCCAAGGGACTTGAAAGAGGATATTGAGGTCAAACATGTCGATGCTCTAGTCGAGAGT
CCGCCACTGGAGGAAATTGACCCGGTTGCCGAGAGAAAGCTTGTGCGCAAACTAGATCTCATCTTGCTACCGATG
TTTTGCTTGATCTGTAAGCTCATGACTTTCGCTGACTCCTGAGATATATGTTGTCTAATTTGTACTGTCTCAACA
GATTGCGTGAGTTTCGTTGACAGGCATGTTCTATTCGATATTCAGTTTCGTAGCTTGACTTGCGTTCCGTAGGAC
TGCTGTTGGTGCGTGGAGGGTCGAGTGTACAGCCTGTTTAGCATCATCGTTTCTAATACGGCACAATGTATAGGT
AACGCCAAAATTGCAGGTGCGCCATCGAATGTTACTTTGAAAATTTGAGGACTGACATTTGTTATCAGGTCTCGA
AGCGGATCTTGGCATGAAAGGACTCGACTTCAATATCGCGCTGACAGTGTTCTACATCTGTGTATGTCATCATCT
CATCTTGTACTACGGTGCCAACCTATATTGCACCTAGTTCACTGCCATCGAAGTACCATCAAATCTAATTCTCAA
ACGAGTCGGCTCCATATGGGTCGCATACTTAGTCCTTACATTCGGGGCGGTAGCTTTAGGGTCTGCTTTCATGAA
AACCTATGCGCATATGCTGGTGACAAGGGTATTTTTGGGAATTGCAGAAGGCGGAACACTGGTAAATCTAAGTTC
ATATATCTTGGCGAATGGACGTTGACGAAAATTTTGACAGGCTGGACTTGTTTACACTTTGGCGCGGGTGAGGTG
GTGACATCAAATGGCTTTAAAGCTAACGTCTAATTACTTCAGTTCTACCGTCGCAAAGAACTTGTCCTCCGTATG
GGATTCTTTTTCGGAATCGCCGCAAGTCTTTCAGGAGCATGTGAGTCCTTGAGTCCTTTCCAATGTTCAAGTCAT
ACCAATTAAATATCTAGTCGGGGGTCTTCTTGCTTCAGGACTCTTGAGTATCCGAGATTTTGGTGCGATCAAAAG
TTGGAGGAAGGTCAGATATTAACAAAAGAGAAAAAGATCAAATAACCAAAACTTTTATAGATCTTTTTCGTTGAG
GGTAAAGAGCCTCATTCTCTTGGTGTATAAATTTAAACCATTTTTATCACAGGTATTATCACCATCAGCATTGGT
CTTTGTTTGTTGGTCGTCATGCCAGAGGACCCACGTAAAACAAGAATGTTGAACGAGTCCGAGCGAGCAATGGCA
ATCGCTAGGATCAATGCTGATGCGGCAGTCAAAGTTGACGGAAGAAAAGAAAAGTCAACTTGGAAACTCGTCCTG
CGCTCTTTTAATATCTGGGTATACCGTCTATCGTTGTATGCTTCACTCATTCTGATATTTGTGTATAGACGTCCG
TGTGCGCAGTGGGATACCTTTTCGTTAACATTTCGTTTCAGGGATTGAGCTTGTTTTTGCCGACTGTGATAAACT
CGCGTGAGTACTTCCATCGATACGTTGTGAATTTTCTCTGAAATAATTATCGTAGTGGGCAATTTCCGTGCGTGG
TTTTTGGGTCATGTAACTCACTGAGCGTCGTGTAACGGATTATAACCAGCCGTTGTGGAGTCTCAACTAAGGACG
GTTCCATGTTTTCTCGTTGGCGCAGTTTGGTCTGTTTGCCTCTGCTACGCTAGTTTGTGGCTGGATAACCGAGGC
ACTATGGTCATCGCTTCTATGGTCTCCCAAATAGTGGGATATGCTATTGCGATCGGTACCGAAAATCCTCATGCA
CGTTATGCTGGTTGTTTCTTGACTGTCATGGGAGGAACATCTTCTGGTCCTTTGGTAATGCGCCTTTCTTTCTTG
ATGTCGCCTCAGCTCTTATTGATCCATATCATCTAGCTCTTCACCTGGGGTATAGATAATGCAGCCCCCGATACT
ATGCGAGCGATCGCGGCAGCCCTCATTCCTGGGATTGGTGCCCTAGGTTCAATCATTGCGTAAGTTCAAGTGAAA
TATCAGAAAATTATGTTGACGTCATTTAAATTCTATTCAGTGTCTGGACATACCTTCCTGGTGACGCACCGAACT
TTCGTACAGGGAACTCCATCAATCTTACAGCTGGAATTGCGGTTATTGTGTTTGTTTCAATCGGCATGTTGTATT
TGCGACACGAAAATAGGAAGCGGGATCAAGGTGGAAGGGACTACCGGTTGGAGGGGAAGACTGAGGAAGAGATTA
GAGATTTGGGTTATAGGCACCCTGATTTCCGCTACCAATTATGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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