Fungal Genomics

at Utrecht University

General Properties

Protein ID	AgabiH97\|049880
Gene name
Location	scaffold_2:2805722..2807049
Strand	+
Gene length (bp)	1327
Transcript length (bp)	945
Coding sequence length (bp)	945
Protein length (aa)	315

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF00651	BTB	BTB/POZ domain	3.1E-06	117	222

Swissprot hits

(None)

GO

GO Term	Description	Terminal node
GO:0005515	protein binding	Yes
GO:0005488	binding	No
GO:0003674	molecular_function	No

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 49	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Developmental stages of Agaricus bisporus (strain A15). Published in Pelkmans et al, Applied Microbiology and Biotechnology, 2016

Click here for more information

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>AgabiH97\|049880 MPQESPRGNLKLECKTSLRPTLSLLQQVETVTESIFDFLSMLVTTSWGLLQTSRQTNVGGVYPPSFPRCPRTHTT SHLIAWSQQSYLSMSDSDDSCTQPTPTDTLRRHEDYYLPGGDLHLLVGRTCFRIHSFFFLRESLYWKNRLAGMAS TGMTHERPGFDENTALHIEGVEAEDFAHFLQVFYNPRYDTYNTSLANWETILRLATKWECPRIREIAVDHIDKLP GVRDVQKVKIYRDNQVSQSLIIPFYIALARRSDSLERAEFQYLDSEDLHYIVTAREMLRLRRDPCNCLWDVYGRN SNYKIIGDLDASRL*
Coding	>AgabiH97\|049880 ATGCCGCAAGAATCGCCTCGTGGAAACCTAAAATTAGAATGCAAGACTAGCCTTCGGCCAACCCTCAGCCTCCTT CAGCAAGTGGAAACTGTAACCGAATCTATATTTGACTTTTTGTCTATGCTTGTGACTACATCGTGGGGGCTTCTT CAAACCTCAAGGCAGACGAATGTGGGAGGAGTATACCCACCATCTTTCCCGAGATGCCCTAGAACACATACCACA TCTCATCTCATCGCTTGGAGCCAGCAATCCTATCTTTCCATGTCGGATAGCGACGATTCATGCACTCAACCGACG CCTACGGACACTCTTCGTCGGCACGAGGACTACTACCTCCCTGGGGGGGATCTACATCTTCTCGTCGGACGAACG TGTTTCCGAATCCACTCGTTCTTTTTCCTTAGGGAATCCTTGTATTGGAAAAATCGCCTGGCCGGGATGGCATCT ACAGGAATGACTCATGAACGTCCCGGTTTCGATGAAAACACCGCATTGCACATTGAAGGAGTTGAAGCCGAGGAC TTCGCCCACTTCTTACAAGTATTTTACAATCCGCGGTACGATACTTATAATACGTCGTTAGCAAATTGGGAAACA ATACTCCGATTGGCGACCAAATGGGAATGCCCGAGGATACGTGAGATTGCTGTTGACCACATTGACAAACTTCCC GGAGTCAGGGACGTTCAAAAAGTCAAAATATATCGTGATAATCAAGTATCCCAAAGTCTCATAATCCCGTTTTAC ATCGCCCTTGCGCGTCGTTCAGATAGCCTTGAACGAGCCGAGTTTCAATATCTTGACAGTGAGGACCTTCATTAC ATCGTCACAGCGAGGGAGATGCTTCGACTGAGACGGGATCCCTGCAACTGTTTATGGGACGTCTACGGAAGAAAT TCAAACTATAAGATCATTGGTGATCTAGACGCTTCACGATTATAA
Transcript	>AgabiH97\|049880 ATGCCGCAAGAATCGCCTCGTGGAAACCTAAAATTAGAATGCAAGACTAGCCTTCGGCCAACCCTCAGCCTCCTT CAGCAAGTGGAAACTGTAACCGAATCTATATTTGACTTTTTGTCTATGCTTGTGACTACATCGTGGGGGCTTCTT CAAACCTCAAGGCAGACGAATGTGGGAGGAGTATACCCACCATCTTTCCCGAGATGCCCTAGAACACATACCACA TCTCATCTCATCGCTTGGAGCCAGCAATCCTATCTTTCCATGTCGGATAGCGACGATTCATGCACTCAACCGACG CCTACGGACACTCTTCGTCGGCACGAGGACTACTACCTCCCTGGGGGGGATCTACATCTTCTCGTCGGACGAACG TGTTTCCGAATCCACTCGTTCTTTTTCCTTAGGGAATCCTTGTATTGGAAAAATCGCCTGGCCGGGATGGCATCT ACAGGAATGACTCATGAACGTCCCGGTTTCGATGAAAACACCGCATTGCACATTGAAGGAGTTGAAGCCGAGGAC TTCGCCCACTTCTTACAAGTATTTTACAATCCGCGGTACGATACTTATAATACGTCGTTAGCAAATTGGGAAACA ATACTCCGATTGGCGACCAAATGGGAATGCCCGAGGATACGTGAGATTGCTGTTGACCACATTGACAAACTTCCC GGAGTCAGGGACGTTCAAAAAGTCAAAATATATCGTGATAATCAAGTATCCCAAAGTCTCATAATCCCGTTTTAC ATCGCCCTTGCGCGTCGTTCAGATAGCCTTGAACGAGCCGAGTTTCAATATCTTGACAGTGAGGACCTTCATTAC ATCGTCACAGCGAGGGAGATGCTTCGACTGAGACGGGATCCCTGCAACTGTTTATGGGACGTCTACGGAAGAAAT TCAAACTATAAGATCATTGGTGATCTAGACGCTTCACGATTATAA
Gene	>AgabiH97\|049880 ATGCCGCAAGAATCGCCTCGTGGAAACCTAAAATTAGAATGCAAGACTAGCCTTCGGCCAACCCTCAGCCTCCTT CAGCAAGTGGAAGTCAGTGAATTCGCCCGTGGCTTCGTATAGATCTCTTTAGGAACCGACTAGACCTCTAGCGCG AGTATTTGAACAACCCCTTATCCAGACTGTAACCGAATCTATATTTGACTTTTTGTCTATGCTTGTGACTACATC GTGGGGGCTTCTTCAAACCTCAAGGCAGACGAATGTGGGAGGAGTATACCCACCATCTTTCCCGAGATGCCCTAG AACACGTAAGATCTTTCTCTTCAGGGATATTTAGCTGTAAAATCAGCAAGGCGTCTCCTATCTTGTCTGATTGAC AGATACCACATCTCATCTCATCGCTTGGAGCCAGCAATCCTATCTTTCCATGTCGGATAGCGACGATTCATGCAC TCAACCGACGCCTACGGACACTCTTCGTCGGCACGAGGACTACTACCTCCCTGGGGGGGATCTACATCTTCTCGT GGGTAACTCATCATGTCTGGCTACTCAATGTCGAAACCACTGCAGGTCGGACGAACGTGTTTCCGAATCCACTCG TTCTTTTTCCTTAGGGAATCCTTGTATTGGAAAAATCGCCTGGCCGGGATGGCATCTACAGGAATGACTCATGAA CGTCCCGGTTTCGATGAAAACACCGCATTGCACATTGAAGGAGTTGAAGCCGAGGACTTCGCCCACTTCTTACAA GTATTTTACAATCCGTACGCTTTTCACTTTCTCATACAATCGAGTTCTGAGCGTATGACCCTCAATTATAGGCGG TACGATACTTATAATACGTCGTTAGCAAATTGGGAAACAATACTCCGATTGGCGACCAAATGGGAATGCCCGAGG ATACGTGAGATTGCTGTTGACCACATTGACAAACTTCCCGGAGTCAGGGACGTTCAAAAAGTCAAAATATATCGT GATAATCAAGTATCCCAAAGTCTCATAATCCCGTTTTACATCGCCCTTGCGCGTCGTTCAGATAGCCTTGAACGA GCCGAGTTTCAATATCTTGACAGTGAGGACCTTCATTACATCGTCACAGCGAGGGAGATGCTTCGTGCTCCCACC CCTGAGGGTGGTACTCGCCTTGCGAGTCCATGTCTACAAAATAGGACTGAGACGGGATCCCTGCAACTGTTTATG GGACGTCTACGGAAGAAATTCAAACTATAAGATCAGTGAGTGGGTTTTACTCTCTGGCATCCTCATGATATCCAG GACCTGATGCCTTGCTTGTTTAGTTGGTGATCTAGACGCTTCACGATTATAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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