Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabiH97|049850
Gene name
Locationscaffold_2:2798803..2801084
Strand+
Gene length (bp)2281
Transcript length (bp)1233
Coding sequence length (bp)1233
Protein length (aa) 411

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 24 0.45

Transmembrane Domains

Domain # Start End Length
1 269 291 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Developmental stages of Agaricus bisporus (strain A15). Published in Pelkmans et al, Applied Microbiology and Biotechnology, 2016

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >AgabiH97|049850
MLPASSFIIQLHTLLLSRVLCHSEPRHVLIVISITNARMESGTRAIPNLDRIKAFMSAYENAPSLTAWESLTEDE
QIEHQEEMTKILEDPDTLKQFSEACKNIGQTAVAIDENFRTVQKGFNDLVEKYGADFPDVGRVYVPKWAGFMARW
NGDTGMLWSSRKLAAETAASLTDYGINLALIADIQSQDDLEGAQMELKQYVEKHPVEIATRVSDQFKDLRNDIGD
FSKDFTAYIEEQKQKLTEDAAAFEADILKYQAEIAELNEKIKIAGITLGFSFIFGIFSAIPAGFLIDFLVKRGKA
QENLNQAQANLARTIAKQAALAAMQADFEKLKPNIDQICNDLGVFASVWAFATEQTTEINIALDEGMEVLTRKKF
IVKLNLLIAQIEPLKEGMRQYATQITPPSSFADAE*
Coding >AgabiH97|049850
ATGTTGCCGGCTTCTTCATTCATCATTCAACTTCATACACTTCTATTGTCAAGGGTGTTGTGCCACTCCGAACCT
CGCCATGTTCTTATCGTCATTTCTATTACGAATGCCCGCATGGAATCCGGGACTCGTGCCATCCCAAACTTGGAC
CGGATAAAAGCTTTTATGTCTGCCTACGAGAACGCGCCTAGCTTGACCGCATGGGAGTCTCTTACCGAGGATGAA
CAGATCGAGCATCAAGAAGAAATGACGAAAATTCTAGAGGACCCAGACACGCTCAAACAGTTTAGTGAGGCGTGC
AAGAATATCGGCCAGACGGCTGTCGCCATCGATGAGAACTTCAGGACCGTCCAAAAGGGATTTAATGATCTTGTC
GAGAAATATGGTGCGGATTTCCCCGACGTTGGAAGAGTATACGTCCCTAAGTGGGCTGGTTTTATGGCTCGATGG
AATGGGGATACGGGGATGCTCTGGTCTTCGAGGAAGCTGGCGGCCGAAACTGCGGCTTCACTGACCGACTATGGT
ATCAACCTTGCACTCATCGCAGATATCCAGTCCCAGGACGACTTGGAAGGTGCACAAATGGAACTGAAGCAATAC
GTCGAAAAGCATCCAGTAGAGATTGCAACAAGGGTCTCAGACCAGTTCAAAGATCTTAGGAACGACATTGGGGAT
TTCTCCAAGGATTTCACAGCTTACATCGAGGAACAAAAGCAGAAACTTACGGAAGACGCGGCAGCGTTCGAGGCG
GACATCTTGAAATATCAGGCAGAAATTGCTGAGCTCAACGAGAAGATCAAAATAGCCGGCATCACCTTGGGCTTC
AGCTTTATCTTTGGAATCTTTTCCGCCATCCCGGCTGGTTTCCTCATCGACTTTTTGGTGAAACGCGGTAAGGCG
CAGGAAAACCTTAACCAAGCCCAAGCCAACCTTGCCCGAACTATCGCTAAGCAGGCGGCATTAGCGGCCATGCAG
GCAGACTTCGAGAAGTTGAAACCTAACATTGACCAAATCTGCAATGACCTAGGCGTTTTTGCAAGTGTTTGGGCT
TTTGCTACCGAGCAAACCACCGAGATAAATATTGCACTTGATGAAGGAATGGAAGTGCTGACGCGCAAGAAATTC
ATCGTCAAACTCAACCTGCTTATCGCTCAGATCGAACCACTTAAGGAGGGCATGAGGCAATATGCCACTCAAATT
ACTCCTCCCTCGTCTTTCGCTGATGCGGAATGA
Transcript >AgabiH97|049850
ATGTTGCCGGCTTCTTCATTCATCATTCAACTTCATACACTTCTATTGTCAAGGGTGTTGTGCCACTCCGAACCT
CGCCATGTTCTTATCGTCATTTCTATTACGAATGCCCGCATGGAATCCGGGACTCGTGCCATCCCAAACTTGGAC
CGGATAAAAGCTTTTATGTCTGCCTACGAGAACGCGCCTAGCTTGACCGCATGGGAGTCTCTTACCGAGGATGAA
CAGATCGAGCATCAAGAAGAAATGACGAAAATTCTAGAGGACCCAGACACGCTCAAACAGTTTAGTGAGGCGTGC
AAGAATATCGGCCAGACGGCTGTCGCCATCGATGAGAACTTCAGGACCGTCCAAAAGGGATTTAATGATCTTGTC
GAGAAATATGGTGCGGATTTCCCCGACGTTGGAAGAGTATACGTCCCTAAGTGGGCTGGTTTTATGGCTCGATGG
AATGGGGATACGGGGATGCTCTGGTCTTCGAGGAAGCTGGCGGCCGAAACTGCGGCTTCACTGACCGACTATGGT
ATCAACCTTGCACTCATCGCAGATATCCAGTCCCAGGACGACTTGGAAGGTGCACAAATGGAACTGAAGCAATAC
GTCGAAAAGCATCCAGTAGAGATTGCAACAAGGGTCTCAGACCAGTTCAAAGATCTTAGGAACGACATTGGGGAT
TTCTCCAAGGATTTCACAGCTTACATCGAGGAACAAAAGCAGAAACTTACGGAAGACGCGGCAGCGTTCGAGGCG
GACATCTTGAAATATCAGGCAGAAATTGCTGAGCTCAACGAGAAGATCAAAATAGCCGGCATCACCTTGGGCTTC
AGCTTTATCTTTGGAATCTTTTCCGCCATCCCGGCTGGTTTCCTCATCGACTTTTTGGTGAAACGCGGTAAGGCG
CAGGAAAACCTTAACCAAGCCCAAGCCAACCTTGCCCGAACTATCGCTAAGCAGGCGGCATTAGCGGCCATGCAG
GCAGACTTCGAGAAGTTGAAACCTAACATTGACCAAATCTGCAATGACCTAGGCGTTTTTGCAAGTGTTTGGGCT
TTTGCTACCGAGCAAACCACCGAGATAAATATTGCACTTGATGAAGGAATGGAAGTGCTGACGCGCAAGAAATTC
ATCGTCAAACTCAACCTGCTTATCGCTCAGATCGAACCACTTAAGGAGGGCATGAGGCAATATGCCACTCAAATT
ACTCCTCCCTCGTCTTTCGCTGATGCGGAATGA
Gene >AgabiH97|049850
ATGTTGCCGTGAAGGCCTCGTTGCTTTTGAAAGGTAACATGTTGATCGTTTTGCTAACCATTGCCTAGTTCTTAC
CGACATTTCCAATCGCAAAAACCCGCGTGTAACTGAACTTGCGCCACCGCAAACTTTGGCGCAAGGGCTTCTTCA
TTCATCATTCAAGTAATTCTGAAAGGTGTCATGTTGATCGCATGCTAACCAATATTGTCAGCTTCATACACTTCT
ATTGTCAAGGGTGTTGTGCCACTCCGAACCTCGCCGTAAAATCTTCATGCAATATTCACTATCATGACGGGTATA
ATGTTGATCGTTCGCTAACATTCTTAAGATGTTCTTATCGTCATTTCTATTACGAATGCCCGCATGGAATCCGGG
ACTCGTGCCATCCCAAACTTGGAGTAAAGGCCTCATTTCTCATTCAAGTCTTGAAAGGTAGCATGTTGATCATTT
GCTCACCATCTCCTGCCTAATACCGTCCGTCCTGCCCAATTCTATTACGAATTTCGGCATGGAAAAGGGACTCGA
CTTCTTGACAGACCGGCTGGAATCAAATAAGTGGCAACTCGACCTTCTTCAACGAAAAAGGGAGGCGAAACTGTG
ACCCCCTTTGCAGCCGGATAAAAGGTAAGGAAGCGATAAGCAATCCACCAACTACCACTCTCACTTGCATTTTCA
TTTGCCCGTGTCTATCAGCTTTTATGTCTGCCTACGAGAACGCGCCTAGCTTGACCGCATGGGAGTCTCTTACCG
AGGATGAACAGATCGAGCATCAAGAAGAAATGACGAAAATTCTAGAGGACCCAGACACGCTCAAACAGTTTAGTG
AGGCGTGCAAGAATATCGGCCAGACGGCTGTCGCCATCGATGAGAACTTCAGGACCGTCCAAAAGGGATTTAATG
ATCTTGTCGAGAAATATGGTGCGGATTTCCCCGACGTTGGAAGAGTATACGTCCCTAAGTGGGCTGGTTTTATGG
CTGTAAGGAATGTCTTCCCTTTATTATCGCCCACCAATAACCTCCATATGTGCTAGCGATGGAATGGGGATACGG
GGATGCTCTGGTCTTCGAGGAAGCTGGCGGCCGAAACTGCGGCTTCACTGACCGGTCAGCTGTTCTCTTTTGAAG
TGCTTTTGTCTCTTACTGATTCTTACACGGTATAGACTATGGTATCAACCTTGCACTCATCGCAGATATCCAGTC
CCAGGACGACTTGGAAGGTGCACAAATGGAACTGAAGCAATACGTCGTAACTATCCCACGCTTAGCTCTGGTCGA
ATCTCCGAAATTTGACGAATGTTTTCGTAGGAAAAGCATCCAGTAGAGATTGCAACAAGGGTCTCAGACCAGTTC
AAAGATCTTAGGAACGACATTGGGGATTTCTCCAAGGATTTCACAGCTTACATCGAGGAACAAAAGCAGAAACTT
ACGGAAGACGCGGCAGCGTTCGAGGCGGACATCTTGAAATATCAGGCAGAAATTGCTGAGTGAGTTATACCACGG
TCCCTTTTGTGGGGGGAGGTTTCTGAGCCTTTCTTTTTCCGCAGGCTCAACGAGAAGGTACATTGTTACATGCAG
CCTCGCAAAATTTCTTTTCGTTCAAAACTTTGCTTCATTGATTAGATCAAAATAGCCGGCATCACCTTGGGCTTC
AGCTTTATCTTTGGAGTATGCATGAATCATCGTGTTCCGATTTTGTTCTGATTCAGGGCTGTCCTCAGATCTTTT
CCGCCATCCCGGCTGGTTTCCTCATCGACTTTTTGGTGAAACGCGGTAGTGAGTCGTGCTCTAGTACGAGATTCG
AGGAGCATTTAGCGGATCTTTATTAGAGGCGCAGGAAAACCTTAACCAAGCCCAAGCCAACCTTGCCCGAACTAT
CGCTAAGCAGGCGGCATTAGCGGCCATGCAGGCAGACTTCGAGAAGTTGAAACCTAACATTGACCAAATCTGCAA
TGACCTAGGCGTTTTTGCAAGTGTTTGGGCTTTTGTGAGTGTCTTTCTCAGTAGTGCTCTTCACCAATTCAAACC
ATTCAACTAGGCTACCGAGCAAACCACCGAGATAAATATTGCACTTGATGAAGGAATGGAAGTGCTGACGCGCAA
GGTAAGAGAAAGAGACCTCATTAGATTGTGTGTTGTTGGATAGTATTGATCATATGACATCTTACAGAAATTCAT
CGTCAAACTCAACCTGCTTATCGCTCAGATCGAACCACTTAAGGAGGGCATGAGGCAATATGCCACTCAAATTAC
TCCTCCCTCGTCTTTCGCTGATGCGGAATGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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