Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabiH97|048230
Gene name
Locationscaffold_2:2411588..2413516
Strand-
Gene length (bp)1928
Transcript length (bp)1773
Coding sequence length (bp)1773
Protein length (aa) 591

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 22 0.5

Transmembrane Domains

Domain # Start End Length
1 5 27 22
2 47 69 22
3 82 104 22
4 174 196 22
5 209 231 22
6 243 265 22
7 272 294 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Developmental stages of Agaricus bisporus (strain A15). Published in Pelkmans et al, Applied Microbiology and Biotechnology, 2016

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >AgabiH97|048230
MKNRHILALASVLLLASFVLAGDAVISNNYTSDPYLEFRPPFARSLPVQILLTGIVLTLTAVLFIHLMFTAQYHW
PLAPVNYVLQLSGVTTLLISLIATIHVVLSASRDESQTWPYMLSYIAVDVPPDIEDNPTEWSIAERATWLVMTAS
TSGLIQITHIQFLTLLYPSRLEKQLIFALLGPMAIVAAVMQLLPINPDEDVAHVASAVRNVCNATLSLLFTIALF
IWGILINRKQAWRTDGGTAVFGCAALSLALTSTALNFIYVHRGEQRIAWLQSLMWAVVLWQSFLGWWWWVGAGSG
IGLGGDDDLEEKLRREAKRENRRREAKERRQETKKRAKKVWREVTGAFGREATAIEPVSGQSSQTRRRPPRRTSS
GDSPPVSPSRTTSASSTTGTDPPLVPHVVRRIYASVRRAHLIAAQKQTAERVERIREIQRSGISDTSRTTWGVGN
LIRTVAPMDQDRVRRYPDTDWEGDNDRSEYEMYDATEWRRNRRSRSRETNEDGDVVDHPTSEEEEVRRSRSISRR
SGRRREDESQYRDEDEDRESVHSRTKTSRATTPPSSVIDSDTKPQSLWWWGPLRRWRLRDSTAYS*
Coding >AgabiH97|048230
ATGAAGAATCGACATATCCTCGCATTGGCATCCGTCCTGCTGCTGGCTTCGTTTGTGTTAGCTGGAGATGCGGTC
ATTTCAAACAACTACACGAGTGATCCCTATCTTGAATTTCGGCCGCCTTTTGCTCGTTCTCTACCCGTCCAGATT
CTCCTTACTGGAATTGTCCTGACGCTTACGGCCGTTCTATTCATCCATCTCATGTTCACCGCGCAATATCACTGG
CCTCTGGCGCCTGTCAACTACGTGCTTCAGCTTTCTGGAGTTACGACGTTGCTGATTTCCCTAATTGCGACCATT
CATGTGGTTTTGTCTGCCAGTCGTGATGAAAGTCAGACTTGGCCTTACATGCTGAGTTATATTGCTGTTGATGTA
CCGCCGGATATCGAGGACAATCCAACCGAATGGAGTATTGCTGAGAGGGCAACATGGCTTGTCATGACTGCTTCC
ACCTCTGGACTTATCCAGATCACACATATCCAATTCCTAACGCTCTTATATCCCTCTCGTCTCGAGAAACAACTC
ATTTTCGCACTTCTTGGTCCCATGGCCATAGTAGCCGCCGTTATGCAACTCCTTCCAATCAACCCGGACGAGGAC
GTTGCGCATGTTGCATCTGCTGTTAGAAACGTCTGCAATGCCACCCTATCCCTTCTCTTCACCATTGCGCTCTTT
ATCTGGGGCATTCTCATCAACAGAAAGCAGGCATGGCGAACAGACGGAGGGACAGCCGTCTTTGGATGCGCAGCG
TTGAGTCTCGCTCTCACTTCAACTGCTCTCAATTTCATCTACGTTCATCGTGGAGAACAGAGAATTGCTTGGCTC
CAAAGCCTCATGTGGGCCGTTGTTCTATGGCAAAGCTTTCTCGGTTGGTGGTGGTGGGTCGGTGCTGGCAGTGGA
ATTGGATTGGGAGGAGATGATGACCTTGAAGAGAAACTCAGAAGAGAAGCCAAGAGGGAGAACCGACGAAGAGAA
GCTAAAGAGCGGAGACAAGAAACGAAAAAACGGGCAAAGAAGGTGTGGCGGGAAGTTACGGGAGCTTTTGGGAGG
GAGGCAACTGCCATTGAACCCGTCTCCGGTCAGTCGTCTCAGACTCGTAGACGACCGCCACGCAGGACTTCCTCG
GGTGATTCACCACCCGTTTCACCCTCGAGAACTACTTCCGCATCATCGACAACTGGTACAGATCCCCCACTAGTA
CCACATGTCGTCCGTCGGATTTATGCCAGTGTCCGACGTGCACATTTGATTGCTGCACAGAAGCAGACCGCTGAG
CGCGTTGAGCGGATACGAGAAATACAGAGGAGTGGGATTTCGGATACGTCGAGAACTACTTGGGGCGTGGGTAAC
CTTATACGAACAGTGGCGCCGATGGATCAAGATCGTGTGAGGAGATATCCTGACACTGATTGGGAAGGGGATAAC
GACAGAAGCGAATATGAGATGTACGATGCGACTGAGTGGAGGCGGAATAGGCGGTCTCGCAGTCGGGAGACAAAT
GAGGATGGTGATGTTGTGGATCACCCCACGAGCGAGGAGGAAGAAGTGAGGCGCAGCAGAAGCATTTCCCGACGA
TCAGGGCGACGGAGAGAGGATGAGAGCCAGTATAGAGATGAAGATGAAGATCGAGAGTCTGTGCATAGCAGAACC
AAGACCTCTCGCGCGACGACACCACCGAGCTCTGTTATTGATTCTGATACAAAACCGCAATCTCTGTGGTGGTGG
GGCCCTTTGAGACGGTGGCGTTTACGGGACTCGACGGCGTATTCATGA
Transcript >AgabiH97|048230
ATGAAGAATCGACATATCCTCGCATTGGCATCCGTCCTGCTGCTGGCTTCGTTTGTGTTAGCTGGAGATGCGGTC
ATTTCAAACAACTACACGAGTGATCCCTATCTTGAATTTCGGCCGCCTTTTGCTCGTTCTCTACCCGTCCAGATT
CTCCTTACTGGAATTGTCCTGACGCTTACGGCCGTTCTATTCATCCATCTCATGTTCACCGCGCAATATCACTGG
CCTCTGGCGCCTGTCAACTACGTGCTTCAGCTTTCTGGAGTTACGACGTTGCTGATTTCCCTAATTGCGACCATT
CATGTGGTTTTGTCTGCCAGTCGTGATGAAAGTCAGACTTGGCCTTACATGCTGAGTTATATTGCTGTTGATGTA
CCGCCGGATATCGAGGACAATCCAACCGAATGGAGTATTGCTGAGAGGGCAACATGGCTTGTCATGACTGCTTCC
ACCTCTGGACTTATCCAGATCACACATATCCAATTCCTAACGCTCTTATATCCCTCTCGTCTCGAGAAACAACTC
ATTTTCGCACTTCTTGGTCCCATGGCCATAGTAGCCGCCGTTATGCAACTCCTTCCAATCAACCCGGACGAGGAC
GTTGCGCATGTTGCATCTGCTGTTAGAAACGTCTGCAATGCCACCCTATCCCTTCTCTTCACCATTGCGCTCTTT
ATCTGGGGCATTCTCATCAACAGAAAGCAGGCATGGCGAACAGACGGAGGGACAGCCGTCTTTGGATGCGCAGCG
TTGAGTCTCGCTCTCACTTCAACTGCTCTCAATTTCATCTACGTTCATCGTGGAGAACAGAGAATTGCTTGGCTC
CAAAGCCTCATGTGGGCCGTTGTTCTATGGCAAAGCTTTCTCGGTTGGTGGTGGTGGGTCGGTGCTGGCAGTGGA
ATTGGATTGGGAGGAGATGATGACCTTGAAGAGAAACTCAGAAGAGAAGCCAAGAGGGAGAACCGACGAAGAGAA
GCTAAAGAGCGGAGACAAGAAACGAAAAAACGGGCAAAGAAGGTGTGGCGGGAAGTTACGGGAGCTTTTGGGAGG
GAGGCAACTGCCATTGAACCCGTCTCCGGTCAGTCGTCTCAGACTCGTAGACGACCGCCACGCAGGACTTCCTCG
GGTGATTCACCACCCGTTTCACCCTCGAGAACTACTTCCGCATCATCGACAACTGGTACAGATCCCCCACTAGTA
CCACATGTCGTCCGTCGGATTTATGCCAGTGTCCGACGTGCACATTTGATTGCTGCACAGAAGCAGACCGCTGAG
CGCGTTGAGCGGATACGAGAAATACAGAGGAGTGGGATTTCGGATACGTCGAGAACTACTTGGGGCGTGGGTAAC
CTTATACGAACAGTGGCGCCGATGGATCAAGATCGTGTGAGGAGATATCCTGACACTGATTGGGAAGGGGATAAC
GACAGAAGCGAATATGAGATGTACGATGCGACTGAGTGGAGGCGGAATAGGCGGTCTCGCAGTCGGGAGACAAAT
GAGGATGGTGATGTTGTGGATCACCCCACGAGCGAGGAGGAAGAAGTGAGGCGCAGCAGAAGCATTTCCCGACGA
TCAGGGCGACGGAGAGAGGATGAGAGCCAGTATAGAGATGAAGATGAAGATCGAGAGTCTGTGCATAGCAGAACC
AAGACCTCTCGCGCGACGACACCACCGAGCTCTGTTATTGATTCTGATACAAAACCGCAATCTCTGTGGTGGTGG
GGCCCTTTGAGACGGTGGCGTTTACGGGACTCGACGGCGTATTCATGA
Gene >AgabiH97|048230
ATGAAGAATCGACATATCCTCGCATTGGCATCCGTCCTGCTGCTGGCTTCGTTTGTGTTAGCTGGAGATGCGGTC
ATTTCAAACAAGTACGTATATTCTCCTCTATTTTCCCGACTCTGGCTCACGAAAGCCTCGAAATTAGCTACACGA
GTGATCCCTATCTTGAATTTCGGCCGCCTTTTGCTCGTTCTCTACCCGTCCAGATTCTCCTTACTGGAATTGTCC
TGACGCTTACGGCCGTTCTATTCATCCATCTCATGTTCACCGCGCAATATCACTGGCCTCTGGCGCCTGTCAACT
ACGTGCTTCAGCTTTCTGGAGTTACGACGTTGCTGATTTCCCTAATTGCGACCATTCATGTGGTTTTGTCTGCCA
GTCGTGATGAAAGTCAGACTTGGCCTTACATGCTGAGTTATATTGCTGTTGATGTACCGCCGGATATCGAGGACA
ATCCAACCGAATGGAGTATTGCTGAGAGGGCAACATGGCTTGTCATGACTGCTTCCACCTCTGGACTTATCCAGG
TCCGTTTACTATTTTCCTGATGTCTCCTTGGTTCATAGGCTTTCAGATCACACATATCCAATTCCTAACGCTCTT
ATATCCCTCTCGTCTCGAGAAACAACTCATTTTCGCACTTCTTGGTAAGCATCCTTTATTTACAATCAGCTCACT
CTTGTTCATCTCCTTGCAAAGGTCCCATGGCCATAGTAGCCGCCGTTATGCAACTCCTTCCAATCAACCCGGACG
AGGACGTTGCGCATGTTGCATCTGCTGTTAGAAACGTCTGCAATGCCACCCTATCCCTTCTCTTCACCATTGCGC
TCTTTATCTGGGGCATTCTCATCAACAGAAAGCAGGCATGGCGAACAGACGGAGGGACAGCCGTCTTTGGATGCG
CAGCGTTGAGTCTCGCTCTCACTTCAACTGCTCTCAATTTCATCTACGTTCATCGTGGAGAACAGAGAATTGCTT
GGCTCCAAAGCCTCATGTGGGCCGTTGTTCTATGGCAAAGCTTTCTCGGTTGGTGGTGGTGGGTCGGTGCTGGCA
GTGGAATTGGATTGGGAGGAGATGATGACCTTGAAGAGAAACTCAGAAGAGAAGCCAAGAGGGAGAACCGACGAA
GAGAAGCTAAAGAGCGGAGACAAGAAACGAAAAAACGGGCAAAGAAGGTGTGGCGGGAAGTTACGGGAGCTTTTG
GGAGGGAGGCAACTGCCATTGAACCCGTCTCCGGTCAGTCGTCTCAGACTCGTAGACGACCGCCACGCAGGACTT
CCTCGGGTGATTCACCACCCGTTTCACCCTCGAGAACTACTTCCGCATCATCGACAACTGGTACAGATCCCCCAC
TAGTACCACATGTCGTCCGTCGGATTTATGCCAGTGTCCGACGTGCACATTTGATTGCTGCACAGAAGCAGACCG
CTGAGCGCGTTGAGCGGATACGAGAAATACAGAGGAGTGGGATTTCGGATACGTCGAGAACTACTTGGGGCGTGG
GTAACCTTATACGAACAGTGGCGCCGATGGATCAAGATCGTGTGAGGAGATATCCTGACACTGATTGGGAAGGGG
ATAACGACAGAAGCGAATATGAGATGTACGATGCGACTGAGTGGAGGCGGAATAGGCGGTCTCGCAGTCGGGAGA
CAAATGAGGATGGTGATGTTGTGGATCACCCCACGAGCGAGGAGGAAGAAGTGAGGCGCAGCAGAAGCATTTCCC
GACGATCAGGGCGACGGAGAGAGGATGAGAGCCAGTATAGAGATGAAGATGAAGATCGAGAGTCTGTGCATAGCA
GAACCAAGACCTCTCGCGCGACGACACCACCGAGCTCTGTTATTGATTCTGATACAAAACCGCAATCTCTGTGGT
GGTGGGGCCCTTTGAGACGGTGGCGTTTACGGGACTCGACGGCGTATTCATGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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