Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabiH97|047810
Gene name
Locationscaffold_2:2305148..2307353
Strand+
Gene length (bp)2205
Transcript length (bp)1434
Coding sequence length (bp)1434
Protein length (aa) 478

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF07690 MFS_1 Major Facilitator Superfamily 3.4E-37 63 414

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|P53322|TNA1_YEAST High-affinity nicotinic acid transporter OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TNA1 PE=1 SV=1 1 475 5.0E-59
sp|Q10097|YAOI_SCHPO Uncharacterized transporter C11D3.18C OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC11D3.18c PE=3 SV=1 13 462 2.0E-57
sp|Q9US44|YIZG_SCHPO Uncharacterized transporter C1002.16c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1002.16c PE=3 SV=1 5 471 2.0E-50
sp|Q9P6J0|YHDC_SCHPO Uncharacterized transporter C1683.12 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC1683.12 PE=3 SV=1 2 460 2.0E-47
sp|Q9US37|YFZ4_SCHPO Uncharacterized transporter C1039.04 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1039.04 PE=3 SV=1 29 448 2.0E-46
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Swissprot ID Swissprot Description Start End E-value
sp|P53322|TNA1_YEAST High-affinity nicotinic acid transporter OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TNA1 PE=1 SV=1 1 475 5.0E-59
sp|Q10097|YAOI_SCHPO Uncharacterized transporter C11D3.18C OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC11D3.18c PE=3 SV=1 13 462 2.0E-57
sp|Q9US44|YIZG_SCHPO Uncharacterized transporter C1002.16c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1002.16c PE=3 SV=1 5 471 2.0E-50
sp|Q9P6J0|YHDC_SCHPO Uncharacterized transporter C1683.12 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC1683.12 PE=3 SV=1 2 460 2.0E-47
sp|Q9US37|YFZ4_SCHPO Uncharacterized transporter C1039.04 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1039.04 PE=3 SV=1 29 448 2.0E-46
sp|O94491|YC7A_SCHPO Uncharacterized transporter C417.10 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC417.10 PE=3 SV=1 29 465 1.0E-44
sp|O94572|YGDF_SCHPO Uncharacterized transporter C1773.15 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC1773.15 PE=3 SV=1 13 426 7.0E-44
sp|Q44470|TUB4_AGRVI Putative tartrate transporter OS=Agrobacterium vitis GN=ttuB PE=2 SV=1 29 374 4.0E-39
sp|P70786|TUB3_AGRVI Putative tartrate transporter OS=Agrobacterium vitis GN=ttuB PE=2 SV=1 32 338 5.0E-35
sp|Q88FY6|NICT_PSEPK Putative metabolite transport protein NicT OS=Pseudomonas putida (strain KT2440) GN=nicT PE=2 SV=1 40 353 6.0E-33
sp|O74923|YJ7D_SCHPO Uncharacterized transporter C757.13 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC757.13 PE=3 SV=1 31 470 4.0E-31
sp|P15365|DAL5_YEAST Allantoate permease OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=DAL5 PE=1 SV=1 6 477 1.0E-30
sp|P76470|RHMT_ECOLI Inner membrane transport protein RhmT OS=Escherichia coli (strain K12) GN=rhmT PE=1 SV=2 42 338 7.0E-30
sp|P40445|YIQ6_YEAST Uncharacterized transporter YIL166C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YIL166C PE=1 SV=1 33 464 3.0E-28
sp|Q9C0V8|YHJ1_SCHPO Uncharacterized transporter PB10D8.01 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBPB10D8.01 PE=3 SV=1 24 462 1.0E-27
sp|P25621|FEN2_YEAST Pantothenate transporter FEN2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=FEN2 PE=1 SV=1 13 451 1.0E-26
sp|B5BP49|YP55_SCHPO Uncharacterized transporter C460.05 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC460.05 PE=3 SV=1 23 457 4.0E-26
sp|O43000|LIZ1_SCHPO Pantothenate transporter liz1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=liz1 PE=2 SV=2 19 282 7.0E-24
sp|P39709|SEO1_YEAST Probable transporter SEO1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SEO1 PE=1 SV=1 33 456 1.0E-23
sp|Q9C0U9|YQD3_SCHPO Uncharacterized transporter PB1C11.03 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCPB1C11.03 PE=1 SV=1 24 469 2.0E-23
sp|Q12235|YCT1_YEAST High affinity cysteine transporter OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YCT1 PE=1 SV=1 16 456 8.0E-23
sp|Q07904|THI73_YEAST Thiamine pathway transporter THI73 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=THI73 PE=1 SV=1 1 471 2.0E-22
sp|O13880|VHT1_SCHPO Vitamin H transporter 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=vht1 PE=2 SV=1 5 420 7.0E-22
sp|Q05181|PHT1_PSEPU Phthalate transporter OS=Pseudomonas putida GN=pht1 PE=3 SV=1 25 343 6.0E-18
sp|O13879|YE1F_SCHPO Uncharacterized transporter C1B3.15C OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1B3.15c PE=3 SV=1 9 455 2.0E-16
sp|P0AA76|DGOT_ECOLI D-galactonate transporter OS=Escherichia coli (strain K12) GN=dgoT PE=1 SV=1 57 332 2.0E-15
sp|P0AA77|DGOT_ECOL6 D-galactonate transporter OS=Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) GN=dgoT PE=3 SV=1 57 332 2.0E-15
sp|P53241|VHT1_YEAST Vitamin H transporter OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=VHT1 PE=1 SV=1 31 475 2.0E-15
sp|P39398|LGOT_ECOLI Probable L-galactonate transporter OS=Escherichia coli (strain K12) GN=lgoT PE=1 SV=2 1 276 5.0E-10
sp|Q0K843|SAUU_CUPNH Probable sulfoacetate transporter SauU OS=Cupriavidus necator (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=sauU PE=2 SV=1 44 353 6.0E-09
sp|P0AA80|GARP_ECOLI Probable galactarate transporter OS=Escherichia coli (strain K12) GN=garP PE=1 SV=1 29 316 6.0E-09
sp|P0AA81|GARP_ECO57 Probable galactarate transporter OS=Escherichia coli O157:H7 GN=garP PE=3 SV=1 29 316 6.0E-09
sp|P0CF19|YO162_YEAST Putative uncharacterized transporter YOL162W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YOL162W PE=5 SV=1 280 462 3.0E-07
sp|P0CF20|YO163_YEAST Putative uncharacterized transporter YOL163W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YOL163W PE=5 SV=1 140 254 5.0E-06
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GO

GO Term Description Terminal node
GO:0055085 transmembrane transport Yes
GO:0022857 transmembrane transporter activity Yes
GO:0051179 localization No
GO:0003674 molecular_function No
GO:0051234 establishment of localization No
GO:0008150 biological_process No
GO:0009987 cellular process No
GO:0005215 transporter activity No
GO:0006810 transport No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 66 0.5

Transmembrane Domains

Domain # Start End Length
1 40 62 22
2 77 99 22
3 106 128 22
4 138 160 22
5 172 194 22
6 204 226 22
7 274 296 22
8 309 331 22
9 338 358 20
10 363 385 22
11 397 419 22
12 429 451 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Developmental stages of Agaricus bisporus (strain A15). Published in Pelkmans et al, Applied Microbiology and Biotechnology, 2016

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >AgabiH97|047810
MQPTSVDADAKASSKDLTLNSTEEPKGPDRKLERRTILHIDLRILPLLAAIYAAALIDRINLGAADTAGMGEDLQ
LGINGRFNIVSTLYFVTYIIFQLPGNMFLPVIGIRPWITSCVVAWGAVSFSMGFVKNWQQLTALRLLLGVFEACY
FPAMVYLISTWYKRHEVQKRMAAFYLISICISGLSPIFAWALSLLDGKRNIAGWRWIFIVEGAVTIFLGVLCWFG
IIDIPHRNKFLSAEQTAFVMKRLDDDRGDAIPDKLTLAKVRKYLSDWKLWAYGVMFLCTTLPAYALAYFITFILR
NMGWDSTQALLRSAPPYAPPIITCMLFSWLSDKYKNRSIFLSIQALICLVGLALVAFAKDNGVRYLGTFLINAGN
IGTIPGVLAWSSNNVVSHSKRIVQSAITVMFGGVGGILATTTFRAQDAPRYIPGLAVSIGSQVLLMIVATIVVLY
NQRMNRLSREGKLSEPLEGQPGFYYTL*
Coding >AgabiH97|047810
ATGCAACCCACCTCCGTTGACGCTGATGCTAAAGCAAGCTCTAAAGATCTGACATTGAACTCAACAGAGGAGCCA
AAGGGGCCAGATCGTAAACTAGAGCGTCGGACAATTCTACATATAGATTTGCGTATATTACCGTTGCTCGCCGCG
ATATATGCTGCCGCACTAATCGACCGAATAAATCTGGGCGCAGCTGACACTGCTGGGATGGGGGAGGATCTGCAA
CTTGGTATTAACGGACGCTTCAACATCGTTAGCACCTTGTACTTCGTGACATATATCATCTTTCAGTTACCTGGC
AACATGTTTCTCCCCGTGATTGGCATTAGGCCCTGGATAACGTCCTGCGTCGTTGCTTGGGGAGCCGTTTCTTTC
AGCATGGGGTTCGTCAAAAACTGGCAACAGCTAACAGCATTGCGACTACTTCTCGGTGTATTTGAAGCATGCTAC
TTCCCTGCTATGGTTTACCTTATCTCAACTTGGTACAAGCGCCATGAGGTTCAGAAAAGAATGGCCGCTTTTTAC
CTCATCTCTATCTGCATCAGTGGCCTCAGTCCGATTTTCGCGTGGGCGTTGAGTCTGCTCGATGGTAAAAGAAAC
ATCGCCGGTTGGAGGTGGATCTTCATAGTTGAGGGTGCCGTCACTATCTTCTTGGGAGTCTTGTGCTGGTTTGGG
ATTATAGACATCCCGCACCGGAATAAGTTTCTCTCTGCCGAACAAACAGCTTTTGTCATGAAACGCCTAGACGAT
GATCGCGGGGATGCAATTCCTGACAAGTTGACGTTGGCGAAGGTCCGGAAATATCTCTCCGATTGGAAACTTTGG
GCATATGGAGTCATGTTTCTCTGTACTACATTACCCGCATACGCCTTGGCGTACTTTATCACGTTCATCTTGAGA
AATATGGGTTGGGATAGCACGCAGGCACTCCTTCGGAGCGCACCCCCTTATGCACCACCCATTATCACTTGCATG
CTCTTCTCTTGGCTTTCGGACAAGTACAAGAATCGCAGCATTTTCCTCTCTATTCAGGCTCTCATTTGCCTTGTG
GGGCTGGCCTTGGTTGCATTCGCGAAAGATAACGGTGTTCGATATCTTGGGACGTTCTTGATAAACGCTGGCAAC
ATAGGAACTATTCCTGGTGTTCTGGCTTGGTCATCGAACAATGTCGTTTCGCATAGTAAAAGAATTGTGCAAAGT
GCTATAACGGTCATGTTTGGTGGAGTTGGTGGTATTTTAGCCACCACGACATTTCGGGCACAAGATGCCCCGCGT
TATATTCCTGGTTTGGCTGTGTCTATCGGCTCGCAGGTCCTTCTTATGATTGTAGCGACGATTGTGGTTCTTTAC
AATCAGAGGATGAACAGGTTGTCGAGGGAAGGTAAATTGTCAGAACCTCTGGAAGGACAACCTGGGTTCTACTAT
ACTCTCTGA
Transcript >AgabiH97|047810
ATGCAACCCACCTCCGTTGACGCTGATGCTAAAGCAAGCTCTAAAGATCTGACATTGAACTCAACAGAGGAGCCA
AAGGGGCCAGATCGTAAACTAGAGCGTCGGACAATTCTACATATAGATTTGCGTATATTACCGTTGCTCGCCGCG
ATATATGCTGCCGCACTAATCGACCGAATAAATCTGGGCGCAGCTGACACTGCTGGGATGGGGGAGGATCTGCAA
CTTGGTATTAACGGACGCTTCAACATCGTTAGCACCTTGTACTTCGTGACATATATCATCTTTCAGTTACCTGGC
AACATGTTTCTCCCCGTGATTGGCATTAGGCCCTGGATAACGTCCTGCGTCGTTGCTTGGGGAGCCGTTTCTTTC
AGCATGGGGTTCGTCAAAAACTGGCAACAGCTAACAGCATTGCGACTACTTCTCGGTGTATTTGAAGCATGCTAC
TTCCCTGCTATGGTTTACCTTATCTCAACTTGGTACAAGCGCCATGAGGTTCAGAAAAGAATGGCCGCTTTTTAC
CTCATCTCTATCTGCATCAGTGGCCTCAGTCCGATTTTCGCGTGGGCGTTGAGTCTGCTCGATGGTAAAAGAAAC
ATCGCCGGTTGGAGGTGGATCTTCATAGTTGAGGGTGCCGTCACTATCTTCTTGGGAGTCTTGTGCTGGTTTGGG
ATTATAGACATCCCGCACCGGAATAAGTTTCTCTCTGCCGAACAAACAGCTTTTGTCATGAAACGCCTAGACGAT
GATCGCGGGGATGCAATTCCTGACAAGTTGACGTTGGCGAAGGTCCGGAAATATCTCTCCGATTGGAAACTTTGG
GCATATGGAGTCATGTTTCTCTGTACTACATTACCCGCATACGCCTTGGCGTACTTTATCACGTTCATCTTGAGA
AATATGGGTTGGGATAGCACGCAGGCACTCCTTCGGAGCGCACCCCCTTATGCACCACCCATTATCACTTGCATG
CTCTTCTCTTGGCTTTCGGACAAGTACAAGAATCGCAGCATTTTCCTCTCTATTCAGGCTCTCATTTGCCTTGTG
GGGCTGGCCTTGGTTGCATTCGCGAAAGATAACGGTGTTCGATATCTTGGGACGTTCTTGATAAACGCTGGCAAC
ATAGGAACTATTCCTGGTGTTCTGGCTTGGTCATCGAACAATGTCGTTTCGCATAGTAAAAGAATTGTGCAAAGT
GCTATAACGGTCATGTTTGGTGGAGTTGGTGGTATTTTAGCCACCACGACATTTCGGGCACAAGATGCCCCGCGT
TATATTCCTGGTTTGGCTGTGTCTATCGGCTCGCAGGTCCTTCTTATGATTGTAGCGACGATTGTGGTTCTTTAC
AATCAGAGGATGAACAGGTTGTCGAGGGAAGGTAAATTGTCAGAACCTCTGGAAGGACAACCTGGGTTCTACTAT
ACTCTCTGA
Gene >AgabiH97|047810
ATGCAACCCACCTCCGTTGACGCTGATGCTAAAGCAAGCTCTAAAGATCTGACATTGAACTCAACAGAGGAGCCA
AAGGGGCCAGATCGTAAACTAGAGCGTCGGACAATGTAAGACAGCATTCTATCTGCATAAGGTCAGCTTATTAAC
CGGTTTTCCAGTCTACATATAGATTTGCGTATATTACCGTTGCTCGCCGCGATATATGCTGCCGCACTAATCGAC
CGAATAAATCTGGGCGCAGCTGACACTGCTGGGATGGGGGAGGATCTGGTAATGTCAAATAGCAAGAGCCTTGAA
ATTGAGACTAAAATTCAGGAAATTAACCGCAGCAACTTGGTATTAACGGACGCTTCAACATCGTTAGCACCTTGT
ACTTCGTGACATATATCATCTTGTACGTCTATCGACAATTCGTGTGTCTATTTCTTTGACTGTCTTTCCAGTCAG
TTACCTGGCAACATGTTTCTCCCCGTGATTGGCATTAGGCCCTGGATAACGTCCTGCGTCGTTGCTTGGGGAGCC
GTTTCTTTCAGCATGGGGTTCGTCAAAAACTGGCAACAGCTAACAGCATTGCGACTACTTCTCGGTGTATTTGAA
GTGAGTGTAACAATTTTGTGCGAATCTGTTGGTTAGACCGTTATTTTCTGACTCTTTTGTGGTGCAGGCATGCTA
CTTCCCTGCTATGGTTTACCTTATCTCAACTTGGCAAGTGCTCTGTATTATCCGCAAACTGGATCAAGCTGATAT
CGAACCTCATCAGGTACAAGCGCCATGAGGTTCAGAAAAGGTGTGCCACTTGTGTGTGACTCCTCTTCCCTTCGC
TGATGTATCACGCATCTTATGTAGAATGGCCGCTTTTTACCTCATCTCTATCTGCATCAGTGGCCTCAGTCCGAT
TTTCGCGTGGGCGTTGAGTCTGCTCGATGGTAAAAGAAACATCGCCGGTTGGAGGTGGATCTTCGTAAGCAACAG
ACCATAGAACGTTTTTCACGACTCTTAATCCCGACTTCAGATAGTTGAGGGTGCCGTCACTATCTTCTTGGGAGT
CTTGTGCTGGTTTGGGATTATAGACATCCCGCACCGGAATAAGTTTCTCTCTGCCGAACAAACAGCTTTTGTCAT
GAAACGCCTAGACGATGATCGCGGGGATGCAATTCCTGACAAGTTGACGTTGGCGAAGGTCCGGAAATATCTCTC
CGATTGGAAACTTTGGGCATATGGTGGGTTCTGGATTATCTGATGGGCAATGCTTCTAACGTCCGCCAAGGAGTC
ATGTTTCTCTGTACTACATTACCCGCATGTGGGTATTTGTGATCGGATTCAACGATGTTCGTTTGAGCTCACGGG
ATTTTACCAGACGCCTTGGCGTACTTTATCACGTTCATCTTGAGAAATATGGGTTGGGATAGCACGCAGGCACTC
CTTCGGGTATGAATTAAAATCCATCTCATTACGAAGAGACGATCTCACCCTCTTTTTAGAGCGCACCCCCTTATG
CACCACCCGTAAGTCGATTGCTTGCCTCGTCACAAAAAATTAATTTAATGGGAAATGGGACAGATTATCACTTGC
ATGCTCTTCTCTTGGCTTTCGGACAAGTACAAGAATCGCAGCATTTTCCTCTCTATTCAGGCTCTCATTTGCCTT
GTGGGGCTGGCCTTGGTTGCATTCGCGAAAGATAACGGTGTTCGATATCTTGGTAAGGATCAGCAGTTCTCTCAA
ATATGGCTAGAAAAACCAATCTGTTGTCCGTCGATCAGGGACGTTCTTGATAAACGCTGGCAACATAGGAACTAT
TCCTGGTGTTCTGGCTTGGGTTAGAATTTTGTTTTCTTTTTGGGTTTTATAAATGCTGACGGCTTCAACTAGTCA
TCGAACAATGTCGTTTCGCATAGTAAAAGAATTGTGCAAAGTGCTATAACGGTCATGTTTGGTGGAGTTGGTGGT
ATTTTAGCCACCACGACATTTCGGGCACAAGATGCCCCGCGTTATATTCCTGGTTAGTACATAGCCCTATTCGTT
TTATTAACGGCCATTGAATCTGGGAAATTAGGTTTGGCTGTGTCTATCGGCTCGCAGGTCCTTCTTATGATTGTA
GCGACGATTGTGGTTCTTTACAATCAGAGGATGAACAGGTTGTCGAGGGAAGGTAAATTGTCAGAACCTCTGGAA
GGACAACCTGGGTTCTACTATACTCTCTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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