Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabiH97|047350
Gene name
Locationscaffold_2:2189113..2190104
Strand+
Gene length (bp)991
Transcript length (bp)825
Coding sequence length (bp)825
Protein length (aa) 275

Your browser does not support drawing a protein figure.

PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 20 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Developmental stages of Agaricus bisporus (strain A15). Published in Pelkmans et al, Applied Microbiology and Biotechnology, 2016

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >AgabiH97|047350
MLAPFLIASLLLEATLVFAQSLPVSLSSSCSTTLQALLTSPDTACLNLPLLLTYIVDSDKSVPQTINVWLTGLCG
NNNTCSNDNIANVVGQVVQGCQEDFAAKNIDIASLQGKITDIAQAVYPTVRKAVCLKDTSSSELCVTQTLENIEN
VVGKVDIAHINFDTMKHIVQNVLSNATQLACSDCIKAAYNLGMHDFPAQVSKAKEPFEQVCGASFLDGAEPSNIV
STAGQTSSVSVANSNSAIGLKSSWAVQSVGWSTGLSAGLAAYVYSAFLA*
Coding >AgabiH97|047350
ATGCTGGCCCCCTTCTTGATTGCTTCTTTACTCCTGGAGGCTACCCTTGTCTTTGCACAATCCTTGCCTGTGTCC
CTCTCTTCTTCTTGTTCAACTACTCTTCAAGCCCTCTTAACCTCCCCCGACACGGCTTGCCTGAACCTGCCATTG
CTCCTCACCTATATTGTTGATTCTGACAAGTCGGTACCTCAAACTATCAATGTCTGGTTGACGGGTCTTTGTGGC
AATAACAATACTTGTTCTAATGACAATATTGCCAACGTAGTCGGCCAGGTCGTTCAGGGATGTCAGGAGGATTTT
GCGGCTAAAAACATTGATATTGCGAGCCTTCAAGGGAAAATCACGGATATCGCGCAAGCCGTATACCCGACTGTT
AGAAAGGCGGTGTGTCTGAAAGACACATCCTCCAGCGAACTTTGCGTCACACAGACGTTAGAAAATATTGAAAAC
GTAGTTGGCAAGGTGGACATAGCCCACATCAATTTCGACACCATGAAGCACATCGTCCAGAATGTGCTTTCAAAC
GCTACACAGCTTGCTTGTTCCGATTGTATAAAGGCGGCGTATAACCTGGGTATGCATGATTTCCCCGCTCAGGTT
TCGAAAGCCAAAGAGCCTTTCGAGCAAGTCTGCGGTGCCTCTTTCCTAGATGGAGCTGAACCCTCTAACATTGTA
TCTACGGCCGGACAAACATCATCTGTTAGTGTTGCAAACTCAAACTCGGCTATTGGCTTGAAGTCCTCCTGGGCA
GTACAGTCGGTTGGCTGGAGTACTGGTCTTTCGGCAGGTTTAGCCGCATATGTTTATTCGGCCTTTTTGGCTTGA
Transcript >AgabiH97|047350
ATGCTGGCCCCCTTCTTGATTGCTTCTTTACTCCTGGAGGCTACCCTTGTCTTTGCACAATCCTTGCCTGTGTCC
CTCTCTTCTTCTTGTTCAACTACTCTTCAAGCCCTCTTAACCTCCCCCGACACGGCTTGCCTGAACCTGCCATTG
CTCCTCACCTATATTGTTGATTCTGACAAGTCGGTACCTCAAACTATCAATGTCTGGTTGACGGGTCTTTGTGGC
AATAACAATACTTGTTCTAATGACAATATTGCCAACGTAGTCGGCCAGGTCGTTCAGGGATGTCAGGAGGATTTT
GCGGCTAAAAACATTGATATTGCGAGCCTTCAAGGGAAAATCACGGATATCGCGCAAGCCGTATACCCGACTGTT
AGAAAGGCGGTGTGTCTGAAAGACACATCCTCCAGCGAACTTTGCGTCACACAGACGTTAGAAAATATTGAAAAC
GTAGTTGGCAAGGTGGACATAGCCCACATCAATTTCGACACCATGAAGCACATCGTCCAGAATGTGCTTTCAAAC
GCTACACAGCTTGCTTGTTCCGATTGTATAAAGGCGGCGTATAACCTGGGTATGCATGATTTCCCCGCTCAGGTT
TCGAAAGCCAAAGAGCCTTTCGAGCAAGTCTGCGGTGCCTCTTTCCTAGATGGAGCTGAACCCTCTAACATTGTA
TCTACGGCCGGACAAACATCATCTGTTAGTGTTGCAAACTCAAACTCGGCTATTGGCTTGAAGTCCTCCTGGGCA
GTACAGTCGGTTGGCTGGAGTACTGGTCTTTCGGCAGGTTTAGCCGCATATGTTTATTCGGCCTTTTTGGCTTGA
Gene >AgabiH97|047350
ATGCTGGCCCCCTTCTTGATTGCTTCTTTACTCCTGGAGGCTACCCTTGTCTTTGCACAATCGTGAGTTTACTCC
TACTGACGCCGACTTAAAGTTGATGGCTGTGATGATAGCTTGCCTGTGTCCCTCTCTTCTTCTTGTTCAACTACT
CTTCAAGCCCTCTTAACCTCCCCCGACACGGCTTGCCTGAACCTGCCATTGCTCCTCACCTATATTGTTGATTCT
GACAAGTCGGTACCTCAAACTATCAATGTCTGGTTGACGGGTCTTTGTGGCAATAACAATACTTGTTCTAATGAC
AATATTGCCAACGTAGTCGGCCAGGTCGTTCAGGGATGTCAGGAGGATTTTGCGGCTAAAAACATTGATATTGCG
AGCCTTCAAGGGAAAATCACGGATATCGCGCAAGCCGTATACCCGACTGTTAGAAAGGCGGTGTGTCTGAAAGAG
TGAGTCTTGCATGAATTGGTCGGTAGCTTTACTGAAATAATTTATCTCTCTATCTCAGCACATCCTCCAGCGAAC
TTTGCGTCACACAGACGTTAGAAAATATTGAAAACGTAGTTGGCAAGGTGGACATAGCCCACATCAATTTCGACA
CCATGAAGCACATCGTCCAGAATGTGCTTTCAAACGCTACACAGCTTGCTTGTTCCGATTGTATAAAGGCGGCGT
ATAACCTGGGTATGCATGATTTCCCCGCTCAGGTTTCGAAAGCCAAAGAGCCTTTCGAGCAAGTCTGCGGTGCCT
CTTTCCTAGGTGAGTTTGAAGGTATGGGTCTTTTCGAGCCTATTGTATGAACAATATGTCGGCAGATGGAGCTGA
ACCCTCTAACATTGTATCTACGGCCGGACAAACATCATCTGTTAGTGTTGCAAACTCAAACTCGGCTATTGGCTT
GAAGTCCTCCTGGGCAGTACAGTCGGTTGGCTGGAGTACTGGTCTTTCGGCAGGTTTAGCCGCATATGTTTATTC
GGCCTTTTTGGCTTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail