© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | AgabiH97|047080 |
| Gene name | |
| Location | scaffold_2:2124133..2124748 |
| Strand | - |
| Gene length (bp) | 615 |
| Transcript length (bp) | 615 |
| Coding sequence length (bp) | 615 |
| Protein length (aa) | 205 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF13302 | Acetyltransf_3 | Acetyltransferase (GNAT) domain | 3.8E-19 | 14 | 155 |
| PF00583 | Acetyltransf_1 | Acetyltransferase (GNAT) family | 1.1E-08 | 64 | 154 |
| PF13523 | Acetyltransf_8 | Acetyltransferase (GNAT) domain | 9.6E-07 | 93 | 160 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q9KL03|ATDA_VIBCH | Spermidine N(1)-acetyltransferase OS=Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961) GN=speG PE=1 SV=1 | 49 | 189 | 6.0E-09 |
| sp|P94482|YNAD_BACSU | Uncharacterized N-acetyltransferase YnaD OS=Bacillus subtilis (strain 168) GN=ynaD PE=3 SV=1 | 41 | 186 | 3.0E-08 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0008080 | N-acetyltransferase activity | Yes |
| GO:0016747 | acyltransferase activity, transferring groups other than amino-acyl groups | No |
| GO:0003674 | molecular_function | No |
| GO:0016407 | acetyltransferase activity | No |
| GO:0016740 | transferase activity | No |
| GO:0003824 | catalytic activity | No |
| GO:0016410 | N-acyltransferase activity | No |
| GO:0016746 | acyltransferase activity | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 18 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >AgabiH97|047080 MSESGITLASFSGRLQLAPPDPALDEIVAIHRTHPGTLKHLRVLPDKMTVEEVRALREKRAADNTRKDFYAFTLK DDGSRNEFIGITGIFGIDADQNNCEIGILVAPEKHGGGYGTEMLYCVMQWVFEEKNFHRATFETAVDNIPMQKWF EKTGIRLEAERKEAWRGISTGEYEDVKGYAILEWEWRDRIKANLETRIRARWGL* |
| Coding | >AgabiH97|047080 ATGTCTGAGTCAGGAATCACCCTCGCATCTTTCTCCGGCCGCTTACAGCTTGCACCTCCAGATCCCGCACTGGAT GAAATTGTTGCGATCCACAGAACGCACCCGGGGACGTTAAAACACTTGCGCGTCCTTCCGGATAAAATGACAGTT GAAGAAGTCCGTGCGCTCAGGGAGAAACGCGCCGCAGATAATACGCGAAAAGATTTTTATGCATTCACTTTGAAG GATGATGGCAGCCGAAATGAGTTTATCGGCATAACCGGTATATTCGGAATCGATGCTGACCAGAATAACTGCGAG ATCGGAATATTGGTTGCACCAGAGAAGCATGGAGGAGGCTATGGAACGGAAATGTTATATTGCGTAATGCAATGG GTGTTTGAAGAAAAAAACTTCCATCGGGCAACATTCGAAACAGCCGTGGATAATATTCCTATGCAGAAATGGTTC GAAAAGACCGGAATACGGCTGGAGGCAGAGAGGAAGGAAGCATGGCGAGGGATCAGCACTGGGGAGTACGAGGAT GTCAAAGGATATGCTATATTGGAATGGGAGTGGCGAGATAGAATAAAGGCGAATTTGGAAACCAGGATTCGGGCC CGCTGGGGTTTGTGA |
| Transcript | >AgabiH97|047080 ATGTCTGAGTCAGGAATCACCCTCGCATCTTTCTCCGGCCGCTTACAGCTTGCACCTCCAGATCCCGCACTGGAT GAAATTGTTGCGATCCACAGAACGCACCCGGGGACGTTAAAACACTTGCGCGTCCTTCCGGATAAAATGACAGTT GAAGAAGTCCGTGCGCTCAGGGAGAAACGCGCCGCAGATAATACGCGAAAAGATTTTTATGCATTCACTTTGAAG GATGATGGCAGCCGAAATGAGTTTATCGGCATAACCGGTATATTCGGAATCGATGCTGACCAGAATAACTGCGAG ATCGGAATATTGGTTGCACCAGAGAAGCATGGAGGAGGCTATGGAACGGAAATGTTATATTGCGTAATGCAATGG GTGTTTGAAGAAAAAAACTTCCATCGGGCAACATTCGAAACAGCCGTGGATAATATTCCTATGCAGAAATGGTTC GAAAAGACCGGAATACGGCTGGAGGCAGAGAGGAAGGAAGCATGGCGAGGGATCAGCACTGGGGAGTACGAGGAT GTCAAAGGATATGCTATATTGGAATGGGAGTGGCGAGATAGAATAAAGGCGAATTTGGAAACCAGGATTCGGGCC CGCTGGGGTTTGTGA |
| Gene | >AgabiH97|047080 ATGTCTGAGTCAGGAATCACCCTCGCATCTTTCTCCGGCCGCTTACAGCTTGCACCTCCAGATCCCGCACTGGAT GAAATTGTTGCGATCCACAGAACGCACCCGGGGACGTTAAAACACTTGCGCGTCCTTCCGGATAAAATGACAGTT GAAGAAGTCCGTGCGCTCAGGGAGAAACGCGCCGCAGATAATACGCGAAAAGATTTTTATGCATTCACTTTGAAG GATGATGGCAGCCGAAATGAGTTTATCGGCATAACCGGTATATTCGGAATCGATGCTGACCAGAATAACTGCGAG ATCGGAATATTGGTTGCACCAGAGAAGCATGGAGGAGGCTATGGAACGGAAATGTTATATTGCGTAATGCAATGG GTGTTTGAAGAAAAAAACTTCCATCGGGCAACATTCGAAACAGCCGTGGATAATATTCCTATGCAGAAATGGTTC GAAAAGACCGGAATACGGCTGGAGGCAGAGAGGAAGGAAGCATGGCGAGGGATCAGCACTGGGGAGTACGAGGAT GTCAAAGGATATGCTATATTGGAATGGGAGTGGCGAGATAGAATAAAGGCGAATTTGGAAACCAGGATTCGGGCC CGCTGGGGTTTGTGA |