© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | AgabiH97|046770 |
| Gene name | |
| Location | scaffold_2:2036510..2038287 |
| Strand | - |
| Gene length (bp) | 1777 |
| Transcript length (bp) | 1392 |
| Coding sequence length (bp) | 1392 |
| Protein length (aa) | 464 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF01545 | Cation_efflux | Cation efflux family | 5.8E-44 | 148 | 370 |
| PF16916 | ZT_dimer | Dimerisation domain of Zinc Transporter | 4.0E-08 | 405 | 456 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q08970|MMT2_YEAST | Mitochondrial metal transporter 2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=MMT2 PE=3 SV=2 | 139 | 455 | 3.0E-41 |
| sp|O59758|YJM3_SCHPO | Uncharacterized metal transporter C1020.03 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC1020.03 PE=3 SV=1 | 107 | 451 | 2.0E-40 |
| sp|Q8L725|MTPC1_ARATH | Metal tolerance protein C1 OS=Arabidopsis thaliana GN=MTPC1 PE=2 SV=1 | 141 | 463 | 2.0E-38 |
| sp|Q10LJ2|MTP2_ORYSJ | Metal tolerance protein 2 OS=Oryza sativa subsp. japonica GN=MTP2 PE=2 SV=1 | 149 | 463 | 3.0E-37 |
| sp|Q03218|MMT1_YEAST | Mitochondrial metal transporter 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=MMT1 PE=1 SV=1 | 128 | 428 | 2.0E-32 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q08970|MMT2_YEAST | Mitochondrial metal transporter 2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=MMT2 PE=3 SV=2 | 139 | 455 | 3.0E-41 |
| sp|O59758|YJM3_SCHPO | Uncharacterized metal transporter C1020.03 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC1020.03 PE=3 SV=1 | 107 | 451 | 2.0E-40 |
| sp|Q8L725|MTPC1_ARATH | Metal tolerance protein C1 OS=Arabidopsis thaliana GN=MTPC1 PE=2 SV=1 | 141 | 463 | 2.0E-38 |
| sp|Q10LJ2|MTP2_ORYSJ | Metal tolerance protein 2 OS=Oryza sativa subsp. japonica GN=MTP2 PE=2 SV=1 | 149 | 463 | 3.0E-37 |
| sp|Q03218|MMT1_YEAST | Mitochondrial metal transporter 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=MMT1 PE=1 SV=1 | 128 | 428 | 2.0E-32 |
| sp|P46348|YEAB_BACSU | Uncharacterized transporter YeaB OS=Bacillus subtilis (strain 168) GN=yeaB PE=3 SV=2 | 138 | 450 | 9.0E-19 |
| sp|P96610|YDBO_BACSU | Uncharacterized transporter YdbO OS=Bacillus subtilis (strain 168) GN=ydbO PE=3 SV=1 | 142 | 445 | 2.0E-16 |
| sp|Q57891|Y449_METJA | Uncharacterized transporter MJ0449 OS=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) GN=MJ0449 PE=3 SV=1 | 148 | 449 | 6.0E-13 |
| sp|C0SP78|YDFM_BACSU | Uncharacterized transporter YdfM OS=Bacillus subtilis (strain 168) GN=ydfM PE=3 SV=1 | 146 | 459 | 2.0E-12 |
| sp|Q8ZGY6|ZITB_YERPE | Zinc transporter ZitB OS=Yersinia pestis GN=zitB PE=3 SV=1 | 140 | 433 | 2.0E-11 |
| sp|O07084|CZCD_BACSU | Cadmium, cobalt and zinc/H(+)-K(+) antiporter OS=Bacillus subtilis (strain 168) GN=czcD PE=1 SV=1 | 149 | 367 | 7.0E-08 |
| sp|B2JZA2|FIEF_YERPB | Cation-efflux pump FieF OS=Yersinia pseudotuberculosis serotype IB (strain PB1/+) GN=fieF PE=3 SV=1 | 156 | 448 | 9.0E-08 |
| sp|B7LVD0|FIEF_ESCF3 | Ferrous-iron efflux pump FieF OS=Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CDC 0568-73) GN=fieF PE=3 SV=1 | 156 | 448 | 9.0E-08 |
| sp|Q1C296|FIEF_YERPA | Cation-efflux pump FieF OS=Yersinia pestis bv. Antiqua (strain Antiqua) GN=fieF PE=3 SV=1 | 156 | 448 | 9.0E-08 |
| sp|Q8ZJL7|FIEF_YERPE | Cation-efflux pump FieF OS=Yersinia pestis GN=fieF PE=3 SV=1 | 156 | 448 | 9.0E-08 |
| sp|Q1CD32|FIEF_YERPN | Cation-efflux pump FieF OS=Yersinia pestis bv. Antiqua (strain Nepal516) GN=fieF PE=3 SV=1 | 156 | 448 | 9.0E-08 |
| sp|A9R6A2|FIEF_YERPG | Cation-efflux pump FieF OS=Yersinia pestis bv. Antiqua (strain Angola) GN=fieF PE=3 SV=1 | 156 | 448 | 9.0E-08 |
| sp|A4TSA8|FIEF_YERPP | Cation-efflux pump FieF OS=Yersinia pestis (strain Pestoides F) GN=fieF PE=3 SV=1 | 156 | 448 | 9.0E-08 |
| sp|Q66GA9|FIEF_YERPS | Cation-efflux pump FieF OS=Yersinia pseudotuberculosis serotype I (strain IP32953) GN=fieF PE=3 SV=1 | 156 | 448 | 9.0E-08 |
| sp|B1JQU5|FIEF_YERPY | Cation-efflux pump FieF OS=Yersinia pseudotuberculosis serotype O:3 (strain YPIII) GN=fieF PE=3 SV=1 | 156 | 448 | 9.0E-08 |
| sp|Q31U75|FIEF_SHIBS | Cation-efflux pump FieF OS=Shigella boydii serotype 4 (strain Sb227) GN=fieF PE=3 SV=1 | 156 | 448 | 2.0E-07 |
| sp|B2TVQ7|FIEF_SHIB3 | Cation-efflux pump FieF OS=Shigella boydii serotype 18 (strain CDC 3083-94 / BS512) GN=fieF PE=3 SV=1 | 156 | 448 | 2.0E-07 |
| sp|A7ZUC8|FIEF_ECO24 | Ferrous-iron efflux pump FieF OS=Escherichia coli O139:H28 (strain E24377A / ETEC) GN=fieF PE=3 SV=1 | 156 | 448 | 3.0E-07 |
| sp|Q3YV63|FIEF_SHISS | Cation-efflux pump FieF OS=Shigella sonnei (strain Ss046) GN=fieF PE=3 SV=1 | 156 | 448 | 3.0E-07 |
| sp|Q83PD6|FIEF_SHIFL | Cation-efflux pump FieF OS=Shigella flexneri GN=fieF PE=3 SV=2 | 156 | 448 | 3.0E-07 |
| sp|B1LNL8|FIEF_ECOSM | Ferrous-iron efflux pump FieF OS=Escherichia coli (strain SMS-3-5 / SECEC) GN=fieF PE=3 SV=1 | 156 | 448 | 3.0E-07 |
| sp|Q8FBD1|FIEF_ECOL6 | Ferrous-iron efflux pump FieF OS=Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) GN=fieF PE=3 SV=2 | 156 | 448 | 3.0E-07 |
| sp|Q0TAE9|FIEF_ECOL5 | Ferrous-iron efflux pump FieF OS=Escherichia coli O6:K15:H31 (strain 536 / UPEC) GN=fieF PE=3 SV=1 | 156 | 448 | 3.0E-07 |
| sp|A1AI91|FIEF_ECOK1 | Ferrous-iron efflux pump FieF OS=Escherichia coli O1:K1 / APEC GN=fieF PE=3 SV=1 | 156 | 448 | 3.0E-07 |
| sp|B7N2Q6|FIEF_ECO81 | Ferrous-iron efflux pump FieF OS=Escherichia coli O81 (strain ED1a) GN=fieF PE=3 SV=1 | 156 | 448 | 3.0E-07 |
| sp|B7NU92|FIEF_ECO7I | Ferrous-iron efflux pump FieF OS=Escherichia coli O7:K1 (strain IAI39 / ExPEC) GN=fieF PE=3 SV=1 | 156 | 448 | 3.0E-07 |
| sp|B7MI47|FIEF_ECO45 | Ferrous-iron efflux pump FieF OS=Escherichia coli O45:K1 (strain S88 / ExPEC) GN=fieF PE=3 SV=1 | 156 | 448 | 3.0E-07 |
| sp|B7UNN5|FIEF_ECO27 | Ferrous-iron efflux pump FieF OS=Escherichia coli O127:H6 (strain E2348/69 / EPEC) GN=fieF PE=3 SV=1 | 156 | 448 | 3.0E-07 |
| sp|P69381|FIEF_ECO57 | Ferrous-iron efflux pump FieF OS=Escherichia coli O157:H7 GN=fieF PE=3 SV=1 | 156 | 448 | 3.0E-07 |
| sp|B5YZ52|FIEF_ECO5E | Ferrous-iron efflux pump FieF OS=Escherichia coli O157:H7 (strain EC4115 / EHEC) GN=fieF PE=3 SV=1 | 156 | 448 | 3.0E-07 |
| sp|B7LA12|FIEF_ECO55 | Ferrous-iron efflux pump FieF OS=Escherichia coli (strain 55989 / EAEC) GN=fieF PE=3 SV=1 | 156 | 448 | 3.0E-07 |
| sp|Q32A79|FIEF_SHIDS | Cation-efflux pump FieF OS=Shigella dysenteriae serotype 1 (strain Sd197) GN=fieF PE=3 SV=1 | 156 | 448 | 3.0E-07 |
| sp|B6I4Q7|FIEF_ECOSE | Ferrous-iron efflux pump FieF OS=Escherichia coli (strain SE11) GN=fieF PE=3 SV=1 | 156 | 448 | 3.0E-07 |
| sp|B7NFL2|FIEF_ECOLU | Ferrous-iron efflux pump FieF OS=Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC) GN=fieF PE=3 SV=1 | 156 | 448 | 3.0E-07 |
| sp|P69380|FIEF_ECOLI | Ferrous-iron efflux pump FieF OS=Escherichia coli (strain K12) GN=fieF PE=1 SV=1 | 156 | 448 | 3.0E-07 |
| sp|B1IVG4|FIEF_ECOLC | Ferrous-iron efflux pump FieF OS=Escherichia coli (strain ATCC 8739 / DSM 1576 / Crooks) GN=fieF PE=3 SV=1 | 156 | 448 | 3.0E-07 |
| sp|A8A719|FIEF_ECOHS | Ferrous-iron efflux pump FieF OS=Escherichia coli O9:H4 (strain HS) GN=fieF PE=3 SV=1 | 156 | 448 | 3.0E-07 |
| sp|B1XB81|FIEF_ECODH | Ferrous-iron efflux pump FieF OS=Escherichia coli (strain K12 / DH10B) GN=fieF PE=3 SV=1 | 156 | 448 | 3.0E-07 |
| sp|C5A082|FIEF_ECOBW | Ferrous-iron efflux pump FieF OS=Escherichia coli (strain K12 / MC4100 / BW2952) GN=fieF PE=3 SV=1 | 156 | 448 | 3.0E-07 |
| sp|B7M6W6|FIEF_ECO8A | Ferrous-iron efflux pump FieF OS=Escherichia coli O8 (strain IAI1) GN=fieF PE=3 SV=1 | 156 | 448 | 3.0E-07 |
| sp|Q0SZA5|FIEF_SHIF8 | Cation-efflux pump FieF OS=Shigella flexneri serotype 5b (strain 8401) GN=fieF PE=3 SV=1 | 156 | 448 | 5.0E-07 |
| sp|A7Z1S6|CZCD_BACMF | Cadmium, cobalt and zinc/H(+)-K(+) antiporter OS=Bacillus methylotrophicus (strain DSM 23117 / BGSC 10A6 / FZB42) GN=czcD PE=3 SV=1 | 123 | 367 | 5.0E-07 |
| sp|A7MQ82|FIEF_CROS8 | Cation-efflux pump FieF OS=Cronobacter sakazakii (strain ATCC BAA-894) GN=fieF PE=3 SV=1 | 161 | 448 | 2.0E-06 |
| sp|B5FPR1|FIEF_SALDC | Cation-efflux pump FieF OS=Salmonella dublin (strain CT_02021853) GN=fieF PE=3 SV=1 | 157 | 450 | 3.0E-06 |
| sp|B5BJI1|FIEF_SALPK | Cation-efflux pump FieF OS=Salmonella paratyphi A (strain AKU_12601) GN=fieF PE=3 SV=1 | 157 | 448 | 3.0E-06 |
| sp|B5QWZ4|FIEF_SALEP | Cation-efflux pump FieF OS=Salmonella enteritidis PT4 (strain P125109) GN=fieF PE=3 SV=1 | 157 | 450 | 3.0E-06 |
| sp|B5RFB0|FIEF_SALG2 | Cation-efflux pump FieF OS=Salmonella gallinarum (strain 287/91 / NCTC 13346) GN=fieF PE=3 SV=1 | 157 | 450 | 3.0E-06 |
| sp|B4TCJ9|FIEF_SALHS | Cation-efflux pump FieF OS=Salmonella heidelberg (strain SL476) GN=fieF PE=3 SV=1 | 157 | 450 | 3.0E-06 |
| sp|B4T048|FIEF_SALNS | Cation-efflux pump FieF OS=Salmonella newport (strain SL254) GN=fieF PE=3 SV=1 | 157 | 450 | 3.0E-06 |
| sp|A9MZE6|FIEF_SALPB | Cation-efflux pump FieF OS=Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7) GN=fieF PE=3 SV=1 | 157 | 450 | 3.0E-06 |
| sp|C0Q413|FIEF_SALPC | Cation-efflux pump FieF OS=Salmonella paratyphi C (strain RKS4594) GN=fieF PE=3 SV=1 | 157 | 450 | 3.0E-06 |
| sp|Q8ZKR4|FIEF_SALTY | Cation-efflux pump FieF OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) GN=fieF PE=3 SV=1 | 157 | 450 | 3.0E-06 |
| sp|Q6CZ45|FIEF_PECAS | Cation-efflux pump FieF OS=Pectobacterium atrosepticum (strain SCRI 1043 / ATCC BAA-672) GN=fieF PE=3 SV=1 | 155 | 450 | 3.0E-06 |
| sp|B5F0P5|FIEF_SALA4 | Cation-efflux pump FieF OS=Salmonella agona (strain SL483) GN=fieF PE=3 SV=1 | 157 | 448 | 3.0E-06 |
| sp|Q5PIR7|FIEF_SALPA | Cation-efflux pump FieF OS=Salmonella paratyphi A (strain ATCC 9150 / SARB42) GN=fieF PE=3 SV=1 | 157 | 448 | 3.0E-06 |
| sp|Q57HF4|FIEF_SALCH | Cation-efflux pump FieF OS=Salmonella choleraesuis (strain SC-B67) GN=fieF PE=3 SV=1 | 161 | 450 | 3.0E-06 |
| sp|A9MI51|FIEF_SALAR | Cation-efflux pump FieF OS=Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980) GN=fieF PE=3 SV=1 | 161 | 448 | 4.0E-06 |
| sp|A8AL14|FIEF_CITK8 | Cation-efflux pump FieF OS=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) GN=fieF PE=3 SV=1 | 156 | 448 | 4.0E-06 |
| sp|B4TPS5|FIEF_SALSV | Cation-efflux pump FieF OS=Salmonella schwarzengrund (strain CVM19633) GN=fieF PE=3 SV=1 | 157 | 448 | 5.0E-06 |
| sp|C6DHK1|FIEF_PECCP | Cation-efflux pump FieF OS=Pectobacterium carotovorum subsp. carotovorum (strain PC1) GN=fieF PE=3 SV=1 | 155 | 448 | 1.0E-05 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0008324 | cation transmembrane transporter activity | Yes |
| GO:0006812 | cation transport | Yes |
| GO:0016021 | integral component of membrane | Yes |
| GO:0055085 | transmembrane transport | Yes |
| GO:0031224 | intrinsic component of membrane | No |
| GO:0110165 | cellular anatomical entity | No |
| GO:0005215 | transporter activity | No |
| GO:0009987 | cellular process | No |
| GO:0008150 | biological_process | No |
| GO:0015075 | ion transmembrane transporter activity | No |
| GO:0022857 | transmembrane transporter activity | No |
| GO:0006810 | transport | No |
| GO:0051234 | establishment of localization | No |
| GO:0051179 | localization | No |
| GO:0006811 | ion transport | No |
| GO:0003674 | molecular_function | No |
| GO:0005575 | cellular_component | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 44 | 0.45 |
Expression values
| Label | Description | Expression (RPKM) | Confidence interval (low) | Confidence interval (high) |
|---|---|---|---|---|
| Casing | Casing mycelium | 87.77 | 51.98 | 123.55 |
| Initials | Initials knots | 58.13 | 34.44 | 81.82 |
| Pileal_Stipeal_center | Stage I stipe center | 74.16 | 44.57 | 103.76 |
| Pileal_Stipeal_shell | Stage I stipe shell | 87.34 | 52.34 | 122.35 |
| DIF_stipe_center | Stage II stipe center | 79.18 | 47.63 | 110.74 |
| DIF_stipe_shell | Stage II stipe shell | 42.26 | 24.67 | 59.84 |
| DIF_stipe_skin | Stage II stipe skin | 59.44 | 35.53 | 83.36 |
| DIF_cap_skin | Stage II cap skin | 76.60 | 46.01 | 107.20 |
| DIF_cap_tissue | Stage II cap tissue | 74.20 | 44.59 | 103.82 |
| DIF_gill_tissue | Stage II gill tissue | 84.95 | 51.06 | 118.84 |
| YFB_stipe_center | Young fruiting body stipe center | 69.08 | 40.59 | 97.57 |
| YFB_stipe_shell | Young fruiting body stipe shell | 51.80 | 30.69 | 72.92 |
| YFB_stipe_skin | Young fruiting body stipe skin | 57.78 | 34.35 | 81.21 |
| YFB_cap_skin | Young fruiting body cap skin | 70.80 | 42.50 | 99.10 |
| YFB_cap_tissue | Young fruiting body cap tissue | 63.15 | 37.65 | 88.65 |
| YFB_gill_tissue | Young fruiting body gill tissue | 69.78 | 41.83 | 97.72 |
| YFB_veil | Young fruiting body veil | 73.15 | 43.89 | 102.40 |
Differential expression
| Label1 | Label2 | Q-value | Significant difference |
|---|---|---|---|
| Casing | DIF_gill_tissue | 0.950953 | no |
| Casing | YFB_stipe_center | 0.495031 | no |
| Casing | YFB_stipe_shell | 0.050294 | no |
| Casing | YFB_stipe_skin | 0.149754 | no |
| Casing | YFB_cap_skin | 0.550921 | no |
| Casing | YFB_cap_tissue | 0.292612 | no |
| Casing | YFB_gill_tissue | 0.515125 | no |
| Casing | YFB_veil | 0.635217 | no |
| Casing | Initials | 0.155441 | no |
| Casing | Pileal_Stipeal_center | 0.665751 | no |
| Casing | Pileal_Stipeal_shell | 0.992528 | no |
| Casing | DIF_stipe_center | 0.819569 | no |
| Casing | DIF_stipe_shell | 0.004160 | yes |
| Casing | DIF_stipe_skin | 0.180324 | no |
| Casing | DIF_cap_skin | 0.745907 | no |
| Casing | DIF_cap_tissue | 0.669910 | no |
| DIF_gill_tissue | YFB_stipe_center | 0.568374 | no |
| DIF_gill_tissue | YFB_stipe_shell | 0.066767 | no |
| DIF_gill_tissue | YFB_stipe_skin | 0.187561 | no |
| DIF_gill_tissue | YFB_cap_skin | 0.626699 | no |
| DIF_gill_tissue | YFB_cap_tissue | 0.355696 | no |
| DIF_gill_tissue | YFB_gill_tissue | 0.587774 | no |
| DIF_gill_tissue | YFB_veil | 0.707449 | no |
| YFB_stipe_center | YFB_stipe_shell | 0.385946 | no |
| YFB_stipe_center | YFB_stipe_skin | 0.655383 | no |
| YFB_stipe_center | YFB_cap_skin | 0.965435 | no |
| YFB_stipe_center | YFB_cap_tissue | 0.857431 | no |
| YFB_stipe_center | YFB_gill_tissue | 0.985477 | no |
| YFB_stipe_center | YFB_veil | 0.915187 | no |
| YFB_stipe_shell | YFB_stipe_skin | 0.812952 | no |
| YFB_stipe_shell | YFB_cap_skin | 0.315050 | no |
| YFB_stipe_shell | YFB_cap_tissue | 0.606318 | no |
| YFB_stipe_shell | YFB_gill_tissue | 0.354832 | no |
| YFB_stipe_shell | YFB_veil | 0.255586 | no |
| YFB_stipe_skin | YFB_cap_skin | 0.583503 | no |
| YFB_stipe_skin | YFB_cap_tissue | 0.856552 | no |
| YFB_stipe_skin | YFB_gill_tissue | 0.621124 | no |
| YFB_stipe_skin | YFB_veil | 0.501704 | no |
| YFB_cap_skin | YFB_cap_tissue | 0.798361 | no |
| YFB_cap_skin | YFB_gill_tissue | 0.978251 | no |
| YFB_cap_skin | YFB_veil | 0.950872 | no |
| YFB_cap_tissue | YFB_gill_tissue | 0.828508 | no |
| YFB_cap_tissue | YFB_veil | 0.723951 | no |
| YFB_gill_tissue | YFB_veil | 0.930058 | no |
| Initials | DIF_gill_tissue | 0.196992 | no |
| Initials | YFB_stipe_center | 0.666369 | no |
| Initials | YFB_stipe_shell | 0.797009 | no |
| Initials | YFB_stipe_skin | 0.991015 | no |
| Initials | YFB_cap_skin | 0.599949 | no |
| Initials | YFB_cap_tissue | 0.865100 | no |
| Initials | YFB_gill_tissue | 0.635435 | no |
| Initials | YFB_veil | 0.515480 | no |
| Initials | Pileal_Stipeal_center | 0.476718 | no |
| Initials | Pileal_Stipeal_shell | 0.147956 | no |
| Initials | DIF_stipe_center | 0.323876 | no |
| Initials | DIF_stipe_shell | 0.321000 | no |
| Initials | DIF_stipe_skin | 0.967678 | no |
| Initials | DIF_cap_skin | 0.402356 | no |
| Initials | DIF_cap_tissue | 0.481088 | no |
| Pileal_Stipeal_center | DIF_gill_tissue | 0.746788 | no |
| Pileal_Stipeal_center | YFB_stipe_center | 0.885304 | no |
| Pileal_Stipeal_center | YFB_stipe_shell | 0.222700 | no |
| Pileal_Stipeal_center | YFB_stipe_skin | 0.465509 | no |
| Pileal_Stipeal_center | YFB_cap_skin | 0.927467 | no |
| Pileal_Stipeal_center | YFB_cap_tissue | 0.691243 | no |
| Pileal_Stipeal_center | YFB_gill_tissue | 0.903605 | no |
| Pileal_Stipeal_center | YFB_veil | 0.979682 | no |
| Pileal_Stipeal_center | Pileal_Stipeal_shell | 0.673763 | no |
| Pileal_Stipeal_center | DIF_stipe_center | 0.895686 | no |
| Pileal_Stipeal_center | DIF_stipe_shell | 0.035309 | yes |
| Pileal_Stipeal_center | DIF_stipe_skin | 0.525018 | no |
| Pileal_Stipeal_center | DIF_cap_skin | 0.951362 | no |
| Pileal_Stipeal_center | DIF_cap_tissue | 0.998869 | no |
| Pileal_Stipeal_shell | DIF_gill_tissue | 0.959932 | no |
| Pileal_Stipeal_shell | YFB_stipe_center | 0.502008 | no |
| Pileal_Stipeal_shell | YFB_stipe_shell | 0.048626 | yes |
| Pileal_Stipeal_shell | YFB_stipe_skin | 0.150436 | no |
| Pileal_Stipeal_shell | YFB_cap_skin | 0.556973 | no |
| Pileal_Stipeal_shell | YFB_cap_tissue | 0.291749 | no |
| Pileal_Stipeal_shell | YFB_gill_tissue | 0.521616 | no |
| Pileal_Stipeal_shell | YFB_veil | 0.638685 | no |
| Pileal_Stipeal_shell | DIF_stipe_center | 0.830444 | no |
| Pileal_Stipeal_shell | DIF_stipe_shell | 0.005302 | yes |
| Pileal_Stipeal_shell | DIF_stipe_skin | 0.180575 | no |
| Pileal_Stipeal_shell | DIF_cap_skin | 0.755085 | no |
| Pileal_Stipeal_shell | DIF_cap_tissue | 0.674228 | no |
| DIF_stipe_center | DIF_gill_tissue | 0.885388 | no |
| DIF_stipe_center | YFB_stipe_center | 0.745087 | no |
| DIF_stipe_center | YFB_stipe_shell | 0.126175 | no |
| DIF_stipe_center | YFB_stipe_skin | 0.313257 | no |
| DIF_stipe_center | YFB_cap_skin | 0.797884 | no |
| DIF_stipe_center | YFB_cap_tissue | 0.527187 | no |
| DIF_stipe_center | YFB_gill_tissue | 0.764628 | no |
| DIF_stipe_center | YFB_veil | 0.869220 | no |
| DIF_stipe_center | DIF_stipe_shell | 0.016104 | yes |
| DIF_stipe_center | DIF_stipe_skin | 0.367408 | no |
| DIF_stipe_center | DIF_cap_skin | 0.949903 | no |
| DIF_stipe_center | DIF_cap_tissue | 0.894556 | no |
| DIF_stipe_shell | DIF_gill_tissue | 0.008457 | yes |
| DIF_stipe_shell | YFB_stipe_center | 0.088613 | no |
| DIF_stipe_shell | YFB_stipe_shell | 0.591662 | no |
| DIF_stipe_shell | YFB_stipe_skin | 0.336133 | no |
| DIF_stipe_shell | YFB_cap_skin | 0.059121 | no |
| DIF_stipe_shell | YFB_cap_tissue | 0.177188 | no |
| DIF_stipe_shell | YFB_gill_tissue | 0.067334 | no |
| DIF_stipe_shell | YFB_veil | 0.040058 | yes |
| DIF_stipe_shell | DIF_stipe_skin | 0.275834 | no |
| DIF_stipe_shell | DIF_cap_skin | 0.024444 | yes |
| DIF_stipe_shell | DIF_cap_tissue | 0.032742 | yes |
| DIF_stipe_skin | DIF_gill_tissue | 0.230137 | no |
| DIF_stipe_skin | YFB_stipe_center | 0.714158 | no |
| DIF_stipe_skin | YFB_stipe_shell | 0.742420 | no |
| DIF_stipe_skin | YFB_stipe_skin | 0.956908 | no |
| DIF_stipe_skin | YFB_cap_skin | 0.647988 | no |
| DIF_stipe_skin | YFB_cap_tissue | 0.906128 | no |
| DIF_stipe_skin | YFB_gill_tissue | 0.685681 | no |
| DIF_stipe_skin | YFB_veil | 0.564035 | no |
| DIF_stipe_skin | DIF_cap_skin | 0.446490 | no |
| DIF_stipe_skin | DIF_cap_tissue | 0.527988 | no |
| DIF_cap_skin | DIF_gill_tissue | 0.819112 | no |
| DIF_cap_skin | YFB_stipe_center | 0.819421 | no |
| DIF_cap_skin | YFB_stipe_shell | 0.181805 | no |
| DIF_cap_skin | YFB_stipe_skin | 0.392818 | no |
| DIF_cap_skin | YFB_cap_skin | 0.867377 | no |
| DIF_cap_skin | YFB_cap_tissue | 0.613226 | no |
| DIF_cap_skin | YFB_gill_tissue | 0.838729 | no |
| DIF_cap_skin | YFB_veil | 0.930026 | no |
| DIF_cap_skin | DIF_cap_tissue | 0.951253 | no |
| DIF_cap_tissue | DIF_gill_tissue | 0.750632 | no |
| DIF_cap_tissue | YFB_stipe_center | 0.885602 | no |
| DIF_cap_tissue | YFB_stipe_shell | 0.226925 | no |
| DIF_cap_tissue | YFB_stipe_skin | 0.468133 | no |
| DIF_cap_tissue | YFB_cap_skin | 0.928675 | no |
| DIF_cap_tissue | YFB_cap_tissue | 0.695013 | no |
| DIF_cap_tissue | YFB_gill_tissue | 0.903694 | no |
| DIF_cap_tissue | YFB_veil | 0.979366 | no |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >AgabiH97|046770 MAPGILKSTGTTYVHTSTPWASSFARPHSSQLRFCGPIGPALAHLFHSGLSRRRLYRSFSLAYTSGQTALHSKRL IMMQRRAASTERKGQKSNEDVDRNPDHHDHSHSLFAHSHSHNGEDGSGHSHDAAHIVAALKGNKRDRGSYITLVG LVSNIILTAAKGTAGWFLHSASLLADAGHSLSDLLGDLVVLVCWNLSRRPPSERYPYGFAKFETLGTTTVSLLLI GGALGIGVHSYHLLLATISETLPSVPPGMIHTVIENVTLIAPNLPVSADSHVHSVDVNAAWFAAVGVLVKEWLYW ITKRVAEQENSPVLFANALHHRSDAYSSGVALLAILGTWYFPAIPLDPIGGLIVSVVILQQGASLFKGAWGDLTD AGVSRRKSESLRRSLTPLVKTGVHDDARMLIGIKDLRARRSGSMLFVDLTAQVAPELSVVQAKQLEGKINKTMQE ARKEIAESLWIFI* |
| Coding | >AgabiH97|046770 ATGGCCCCCGGTATCTTGAAAAGCACTGGTACAACATATGTACATACATCCACTCCATGGGCCTCTTCCTTTGCT CGCCCGCACAGCAGTCAGCTTCGCTTCTGCGGGCCCATCGGTCCCGCACTTGCGCATCTTTTCCATTCTGGTCTT AGCCGTCGTCGACTCTATCGTTCCTTCTCCCTTGCTTACACGTCGGGGCAGACTGCGCTCCATTCCAAACGACTC ATCATGATGCAACGTCGTGCTGCGAGCACAGAACGGAAGGGACAGAAGTCGAACGAAGACGTTGATCGTAATCCG GATCACCACGACCATTCACACTCGCTATTCGCTCATTCGCATTCGCACAACGGAGAAGATGGAAGTGGTCATTCT CATGACGCTGCACATATTGTAGCTGCCCTCAAAGGGAATAAACGTGATAGAGGAAGCTATATTACCCTCGTTGGA CTTGTTTCGAATATTATTCTGACTGCCGCAAAGGGTACAGCTGGATGGTTTCTCCATTCTGCGTCGCTCCTTGCG GATGCTGGTCATTCACTTAGCGATCTCCTTGGAGACCTCGTCGTTCTAGTCTGTTGGAACCTCTCGCGGAGACCC CCCTCGGAACGATATCCTTATGGCTTTGCCAAGTTTGAGACCCTGGGAACGACGACAGTATCACTGCTTTTAATT GGTGGTGCCCTTGGCATCGGAGTTCATTCGTATCATTTGCTTTTAGCAACCATAAGCGAGACTCTGCCTTCTGTT CCTCCTGGGATGATACACACCGTTATCGAAAACGTAACACTGATTGCACCAAATTTGCCTGTCAGTGCAGACTCA CATGTACACTCTGTTGATGTCAATGCAGCATGGTTCGCTGCTGTGGGTGTTCTTGTAAAAGAATGGCTATATTGG ATCACGAAGCGTGTGGCAGAGCAGGAAAATAGTCCAGTTTTATTTGCAAACGCTCTTCATCACCGCAGCGATGCG TATTCCAGTGGAGTGGCGCTTCTAGCGATTTTAGGGACTTGGTACTTCCCAGCTATCCCTTTGGATCCTATAGGC GGCCTTATAGTGTCTGTTGTCATATTACAACAAGGAGCCAGCTTATTCAAGGGCGCATGGGGTGATCTAACCGAC GCTGGAGTCTCTCGAAGAAAATCAGAATCACTCAGGCGGTCTCTGACGCCCCTTGTAAAAACTGGCGTACATGAT GATGCTCGAATGTTGATCGGCATTAAAGACCTGCGAGCGCGAAGATCCGGCTCCATGCTATTTGTTGACCTGACG GCTCAGGTCGCCCCAGAGCTGTCTGTCGTTCAGGCAAAACAGTTAGAGGGCAAAATCAACAAGACGATGCAGGAG GCAAGGAAAGAAATAGCTGAGAGTCTGTGGATTTTCATCTAG |
| Transcript | >AgabiH97|046770 ATGGCCCCCGGTATCTTGAAAAGCACTGGTACAACATATGTACATACATCCACTCCATGGGCCTCTTCCTTTGCT CGCCCGCACAGCAGTCAGCTTCGCTTCTGCGGGCCCATCGGTCCCGCACTTGCGCATCTTTTCCATTCTGGTCTT AGCCGTCGTCGACTCTATCGTTCCTTCTCCCTTGCTTACACGTCGGGGCAGACTGCGCTCCATTCCAAACGACTC ATCATGATGCAACGTCGTGCTGCGAGCACAGAACGGAAGGGACAGAAGTCGAACGAAGACGTTGATCGTAATCCG GATCACCACGACCATTCACACTCGCTATTCGCTCATTCGCATTCGCACAACGGAGAAGATGGAAGTGGTCATTCT CATGACGCTGCACATATTGTAGCTGCCCTCAAAGGGAATAAACGTGATAGAGGAAGCTATATTACCCTCGTTGGA CTTGTTTCGAATATTATTCTGACTGCCGCAAAGGGTACAGCTGGATGGTTTCTCCATTCTGCGTCGCTCCTTGCG GATGCTGGTCATTCACTTAGCGATCTCCTTGGAGACCTCGTCGTTCTAGTCTGTTGGAACCTCTCGCGGAGACCC CCCTCGGAACGATATCCTTATGGCTTTGCCAAGTTTGAGACCCTGGGAACGACGACAGTATCACTGCTTTTAATT GGTGGTGCCCTTGGCATCGGAGTTCATTCGTATCATTTGCTTTTAGCAACCATAAGCGAGACTCTGCCTTCTGTT CCTCCTGGGATGATACACACCGTTATCGAAAACGTAACACTGATTGCACCAAATTTGCCTGTCAGTGCAGACTCA CATGTACACTCTGTTGATGTCAATGCAGCATGGTTCGCTGCTGTGGGTGTTCTTGTAAAAGAATGGCTATATTGG ATCACGAAGCGTGTGGCAGAGCAGGAAAATAGTCCAGTTTTATTTGCAAACGCTCTTCATCACCGCAGCGATGCG TATTCCAGTGGAGTGGCGCTTCTAGCGATTTTAGGGACTTGGTACTTCCCAGCTATCCCTTTGGATCCTATAGGC GGCCTTATAGTGTCTGTTGTCATATTACAACAAGGAGCCAGCTTATTCAAGGGCGCATGGGGTGATCTAACCGAC GCTGGAGTCTCTCGAAGAAAATCAGAATCACTCAGGCGGTCTCTGACGCCCCTTGTAAAAACTGGCGTACATGAT GATGCTCGAATGTTGATCGGCATTAAAGACCTGCGAGCGCGAAGATCCGGCTCCATGCTATTTGTTGACCTGACG GCTCAGGTCGCCCCAGAGCTGTCTGTCGTTCAGGCAAAACAGTTAGAGGGCAAAATCAACAAGACGATGCAGGAG GCAAGGAAAGAAATAGCTGAGAGTCTGTGGATTTTCATCTAG |
| Gene | >AgabiH97|046770 ATGGCCCCCGGTATCTTGAAAAGCACTGGTACAACATATGTACATACATCCACTCCATGGGCCTCTTCCTTTGCT CGCCCGCACAGCAGTCAGCTTCGCTTCTGCGGGCCCATCGGTCCCGCACTTGCGTATGTTTGGCTGTCAGTCCCT GAGAACTGTAAACGTGCCATCTTGTAACCATCACAGGCATCTTTTCCATTCTGGTCTTAGCCGTCGTCGACTCTA TCGTTCCTTCTCCCTTGCTTACACGTCGGGGCAGACTGCGCTCCATTCCAAACGACTCATCATGATGCAACGTCG TGCTGCGAGCACAGAACGGAAGGGACAGAAGTCGAACGAAGACGTTGATCGTAATCCGGATCACCACGACCATTC ACACTCGCTATTCGCTCATTCGCATTCGCACAACGGAGAAGATGGAAGTGGTCATTCTCATGACGCTGCACATAT TGTAGCTGCCCTCAAAGGGAATAAACGTGAGCTCCTATTTCCTCCCCTTCCTATTAGCGCGCTCACTATTGCCCG CTTATCCCGTTGCTTAGGTGATAGAGGAAGCTATATTACCCTCGTTGGACTTGTTTCGAATATTATTCTGACTGC CGCAAAGGGTACAGCTGGATGGTTTCTCCATTCTGCGTCGCTCCTTGCGGATGCTGGTCATTCACTTAGCGGTAC GTATTTGTTTCCCTCTTGGGGTGAAGGTTCTGATTCAATGGCTTCCTTATAGATCTCCTTGGAGACCTCGTCGTT CTAGTCTGTTGGAACCTCTCGCGGAGACCCCCCTCGGAACGATATCCTTATGGCTTTGCCAAGTTTGAGACCCTG GGAACGACGACAGTATCACTGCTTTTAATTGGTGGTGCCCTTGGCATCGGAGTTCATTCGTATCATTTGCTTTTA GCAACCATAAGCGAGACTCTGCCTTCTGTTCCTCCTGGGATGATACACACCGTTATCGAAAACGTAACACTGATT GCACCAAATTTGCCTGTCAGTGCAGACTCACATGTACACTCTGTTGATGTCAATGCAGCATGGTTCGCTGCTGTG GGTGTTCTTGTAAAAGAATGGCTATATTGGATCACGAAGCGTGTGGCAGAGCAGGAAAATAGTCCAGTTTTATTT GCAAACGCTCTTCATCACCGCAGCGATGCGTATTCCAGTGGAGTGGCGCTTCTAGCGATTTTAGGGACTTGGTAC TTCCCAGCTATCCCTTTGGATCCTATAGGCGGTGAATAGTCTTCCATTCAACTTGAAAATGATTAGCTAACAAAA TCATCAAACCTACGTCAGGCCTTATAGTGTCTGTTGTCATATTACAACAAGGAGCCAGCTTATTCAAGGGCGCAT GGGGTGATCTAACCGACGCTGGAGTCTCTCGAAGAAAATCAGAATCACTCAGGCGGTCTCTGACGCCCCTTGTAA AAACTGGCGTACATGATGATGCTCGAATGTTGATCGGCATTAAAGACCTGCGAGCGCGAAGATCCGGCTCCATGC TATTTGTTGACCTGACGGCTCAGGTCGCCCCAGAGCTGTCTGTCGTTCAGGCAAAACAGTTAGAGGGCAAAATCA ACAAGACGATGCAGGAGGCAAGGAAAGAAATAGCTGAGGTCAGGGTTAAGTTCGAGCCAGTTCCGTCTGAATGAC GCGTATTACCGATACTCGTCAACTTAACTCTAGAGTCTGTGGATTTTGTACGTCGTATTATACTTTGTTTGTAAA CTGCTCTGACAGCGACACCTTGGACTGACCTCATGTGTTGATAAGCATCTAG |