Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabiH97|046670
Gene name
Locationscaffold_2:2008026..2009043
Strand-
Gene length (bp)1017
Transcript length (bp)864
Coding sequence length (bp)864
Protein length (aa) 288

Your browser does not support drawing a protein figure.

PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 20 0.5

Transmembrane Domains

Domain # Start End Length
1 27 49 22
2 62 84 22
3 116 138 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Developmental stages of Agaricus bisporus (strain A15). Published in Pelkmans et al, Applied Microbiology and Biotechnology, 2016

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >AgabiH97|046670
MVFSAIFSIALWYELSVNAQVTEGIKAAFIVGGIVETLLFVASVFGLVGAIVRKLVFIRIYAIITYVHFCLNLGI
AIWFLVVVFKESSAANKVLCDDSGGAEQQCMQLIGFGKNAFLVVAALVLILEIYGALIVTRYVNQLGRDKNYNRQ
TRRGLEEAFRLEAARYSTLSNSQDPEPAGWYDGYEGTAYDPYREVPTRQPDARSPTPRRFETFKDNGRPSPPVEV
GYGGGTWTHEEISEEEKARLRRQERERGISPPLDEAERRAEIKGVGNSAPMVDEPPLYSYRV*
Coding >AgabiH97|046670
ATGGTCTTTTCGGCAATCTTTTCGATTGCATTATGGTATGAGCTTTCAGTTAACGCTCAAGTCACGGAAGGAATC
AAAGCCGCTTTCATTGTCGGTGGTATCGTGGAGACACTTCTTTTCGTAGCTTCGGTATTTGGGCTCGTTGGGGCA
ATCGTGCGCAAGTTGGTTTTTATACGAATCTATGCAATTATCACCTACGTTCACTTTTGCCTCAATCTCGGAATC
GCAATTTGGTTTCTTGTTGTAGTATTCAAAGAGTCGAGCGCCGCAAACAAGGTGTTGTGCGACGACTCTGGAGGC
GCAGAACAGCAGTGCATGCAACTCATTGGTTTTGGGAAGAATGCGTTCCTTGTTGTGGCTGCCCTCGTTCTCATT
CTTGAAATATACGGTGCTCTTATTGTAACGCGTTATGTGAACCAGCTTGGTCGTGATAAAAATTACAACCGTCAG
ACGAGACGAGGACTAGAGGAAGCATTCAGACTCGAGGCTGCGAGATATTCCACTCTTTCTAACTCTCAAGACCCG
GAACCAGCAGGGTGGTATGATGGCTATGAGGGGACAGCATATGATCCTTATCGAGAAGTTCCGACCCGTCAACCC
GATGCCCGGTCCCCGACGCCGCGCCGTTTCGAAACTTTCAAGGATAACGGCAGACCCTCTCCTCCGGTGGAAGTC
GGATATGGGGGTGGCACTTGGACCCACGAGGAGATTTCAGAGGAGGAAAAAGCGAGGCTGAGGAGACAAGAGCGG
GAGCGGGGGATTTCGCCACCGCTCGATGAAGCGGAGCGAAGGGCAGAAATCAAAGGGGTTGGAAACTCGGCACCA
ATGGTTGATGAACCCCCTCTGTATTCATATCGGGTGTAG
Transcript >AgabiH97|046670
ATGGTCTTTTCGGCAATCTTTTCGATTGCATTATGGTATGAGCTTTCAGTTAACGCTCAAGTCACGGAAGGAATC
AAAGCCGCTTTCATTGTCGGTGGTATCGTGGAGACACTTCTTTTCGTAGCTTCGGTATTTGGGCTCGTTGGGGCA
ATCGTGCGCAAGTTGGTTTTTATACGAATCTATGCAATTATCACCTACGTTCACTTTTGCCTCAATCTCGGAATC
GCAATTTGGTTTCTTGTTGTAGTATTCAAAGAGTCGAGCGCCGCAAACAAGGTGTTGTGCGACGACTCTGGAGGC
GCAGAACAGCAGTGCATGCAACTCATTGGTTTTGGGAAGAATGCGTTCCTTGTTGTGGCTGCCCTCGTTCTCATT
CTTGAAATATACGGTGCTCTTATTGTAACGCGTTATGTGAACCAGCTTGGTCGTGATAAAAATTACAACCGTCAG
ACGAGACGAGGACTAGAGGAAGCATTCAGACTCGAGGCTGCGAGATATTCCACTCTTTCTAACTCTCAAGACCCG
GAACCAGCAGGGTGGTATGATGGCTATGAGGGGACAGCATATGATCCTTATCGAGAAGTTCCGACCCGTCAACCC
GATGCCCGGTCCCCGACGCCGCGCCGTTTCGAAACTTTCAAGGATAACGGCAGACCCTCTCCTCCGGTGGAAGTC
GGATATGGGGGTGGCACTTGGACCCACGAGGAGATTTCAGAGGAGGAAAAAGCGAGGCTGAGGAGACAAGAGCGG
GAGCGGGGGATTTCGCCACCGCTCGATGAAGCGGAGCGAAGGGCAGAAATCAAAGGGGTTGGAAACTCGGCACCA
ATGGTTGATGAACCCCCTCTGTATTCATATCGGGTGTAG
Gene >AgabiH97|046670
ATGGTCTTTTCGGCAATCTTTTCGATTGCATTATGGTATGAGCTTTCAGGTGAGCTCCCGTAATTCTTTTACCGT
CGTAGCTTACTTTAATCCGGTCGGTATTCAGTTAACGCTCAAGTCACGGAAGGAATCAAAGCCGCTTTCATTGTC
GGTGGTATCGTGGAGACACTTCTTTTCGTAGCTTCGGTATTTGGGCAAGTGCTTCAATCGTTTCCTGCGTGTCTT
CTCACTGTAGTGTTAGGCTCGTTGGGGCAATCGTGCGCAAGTTGGTTTTTATACGAATCTATGCAATTATCACCT
ACGTTCACTTTTGCCTCAATCTCGGAATCGCAATTTGGTTTCTTGTTGTAGTATTCAAAGAGTCGAGCGCCGCAA
ACAAGGTGTTGTGCGACGACTCTGGAGGCGCAGAACAGCAGTGCATGCAACTCATTGGTTTTGGGAAGAATGCGT
TCCTTGTTGTGGCTGCCCTCGTTCTCATTCTTGAAATATGTAAGTCTTTCCAAGCTCCTCACACATGTCACTTTC
TTAAAGGACGCAGACGGTGCTCTTATTGTAACGCGTTATGTGAACCAGCTTGGTCGTGATAAAAATTACAACCGT
CAGACGAGACGAGGACTAGAGGAAGCATTCAGACTCGAGGCTGCGAGATATTCCACTCTTTCTAACTCTCAAGAC
CCGGAACCAGCAGGGTGGTATGATGGCTATGAGGGGACAGCATATGATCCTTATCGAGAAGTTCCGACCCGTCAA
CCCGATGCCCGGTCCCCGACGCCGCGCCGTTTCGAAACTTTCAAGGATAACGGCAGACCCTCTCCTCCGGTGGAA
GTCGGATATGGGGGTGGCACTTGGACCCACGAGGAGATTTCAGAGGAGGAAAAAGCGAGGCTGAGGAGACAAGAG
CGGGAGCGGGGGATTTCGCCACCGCTCGATGAAGCGGAGCGAAGGGCAGAAATCAAAGGGGTTGGAAACTCGGCA
CCAATGGTTGATGAACCCCCTCTGTATTCATATCGGGTGTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail