Fungal Genomics

General Properties

Protein ID	AgabiH97|046560
Gene name
Location	scaffold_2:1980450..1982930
Strand	+
Gene length (bp)	2480
Transcript length (bp)	1902
Coding sequence length (bp)	1902
Protein length (aa)	634

Overview

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PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF04049	ANAPC8	Anaphase promoting complex subunit 8 / Cdc23	6.2E-20	12	171
PF13181	TPR_8	Tetratricopeptide repeat	1.5E-01	375	406
PF13181	TPR_8	Tetratricopeptide repeat	3.9E-05	409	441
PF13181	TPR_8	Tetratricopeptide repeat	5.3E-03	477	503
PF13414	TPR_11	TPR repeat	1.3E-06	415	454
PF13432	TPR_16	Tetratricopeptide repeat	2.5E-06	414	453
PF13176	TPR_7	Tetratricopeptide repeat	1.1E-02	481	503

Swissprot hits

GO

GO Term	Description	Terminal node
GO:0005515	protein binding	Yes
GO:0005680	anaphase-promoting complex	Yes
GO:0030071	regulation of mitotic metaphase/anaphase transition	Yes
GO:0005575	cellular_component	No
GO:0010564	regulation of cell cycle process	No
GO:0051726	regulation of cell cycle	No
GO:0031461	cullin-RING ubiquitin ligase complex	No
GO:0008150	biological_process	No
GO:1905818	regulation of chromosome separation	No
GO:0140535	intracellular protein-containing complex	No
GO:1902494	catalytic complex	No
GO:0005488	binding	No
GO:1990234	transferase complex	No
GO:1901987	regulation of cell cycle phase transition	No
GO:0010965	regulation of mitotic sister chromatid separation	No
GO:0065007	biological regulation	No
GO:0007346	regulation of mitotic cell cycle	No
GO:0140513	nuclear protein-containing complex	No
GO:0051128	regulation of cellular component organization	No
GO:0033045	regulation of sister chromatid segregation	No
GO:0033044	regulation of chromosome organization	No
GO:0050794	regulation of cellular process	No
GO:0051983	regulation of chromosome segregation	No
GO:0003674	molecular_function	No
GO:0000152	nuclear ubiquitin ligase complex	No
GO:0033043	regulation of organelle organization	No
GO:1902099	regulation of metaphase/anaphase transition of cell cycle	No
GO:0032991	protein-containing complex	No
GO:1901990	regulation of mitotic cell cycle phase transition	No
GO:0050789	regulation of biological process	No
GO:0000151	ubiquitin ligase complex	No

Deeploc

[Help with interpreting the results of Deeploc 2.0]

Localizations	Signals	Cytoplasm	Nucleus	Extracellular	Cell membrane	Mitochondrion	Plastid	Endoplasmic reticulum	Lysosome vacuole	Golgi apparatus	Peroxisome
Cytoplasm|Nucleus		0.5162	0.6651	0.0217	0.0716	0.1626	0.0025	0.2424	0.2162	0.1877	0.2755

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

Analysis 1: Developmental stages of Agaricus bisporus (strain A15). Published in Pelkmans et al, Applied Microbiology and Biotechnology, 2016

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Orthologs

Orthofinder run ID	1
Orthogroup	1637
Change Orthofinder run	1: Agaricomycetes 5: Agaricus - all strains

Species	Protein ID
Agaricus bisporus var bisporus H39	AgabiH39|046560
Agaricus bisporus var bisporus H97	AgabiH97|046560 (this protein)
Rhodonia placenta FPRL280	RhoplFPRL280|11_75

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus Download genbank file of locus (reverse complement) The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>AgabiH97|046560 MDSAFHVDAQTAAELRAAAKECSERGLVVATKWASELLLALPLSKRRNLADSVPILHYSTSTPAHSKSHELSLSF SDAPSPLPAQGVRHNPTHSGGTIVTHVPSSHGHTGDLQTSEKELEEQDADMLNAAHSFIESKEFARAIHVLQGAR SGKASFIRVYSKFMANEKKAVRDWHKLDNNRLQPPVPVDNTLSELLNEVHDTEDPWLLFLKALFLSRLSRREEAM ECALLSIAGLPWNWSCWTLLGSCIGDGEELSSLLQLVPLSPTHPLVHMFQIKTLSELHQPTENELALCDRLLSAD FFPNSAWLMSLRACVLYHLHEFGQAEQQFEKILAQDPYRIDDIDIYSNILYVTDNKLKLSRLAHEFLALDKDRPE ICCLVGNHYSLRAEHEKAVKYFRRATQLDRTYLSAWTLMGHEYVEMKNSHAAIEAYRRAVDVNRKDYRAWYGLGQ AYELLSMHHYSLYYYRHATALRPYDIRLWQAQGLCYEEIGRRREAIECYKRALIPADPHEININLKLANLYWSLD ELPEAVAYHRRVVEVCQANLRPIQEYAKSCLQVAEYHMGISGGDLYLAKEYLERVASSNAEDVMKATELLKAVKS TLQAGHQNGVGSENQTSQPSEGETSKNSESRER*
Coding	>AgabiH97|046560 ATGGATTCTGCGTTCCATGTAGATGCACAAACTGCTGCTGAGCTGCGTGCCGCAGCCAAGGAATGCTCTGAAAGG GGCCTGGTAGTTGCAACAAAATGGGCCTCAGAACTGCTGCTCGCCCTTCCGCTTTCGAAACGCAGAAATTTGGCT GATTCAGTACCTATACTTCATTATTCAACGTCAACACCAGCCCATTCAAAATCTCACGAGCTTTCTCTCTCGTTT TCTGACGCTCCTTCACCGCTTCCGGCACAGGGTGTGCGACATAATCCGACACATTCTGGTGGTACTATTGTTACT CATGTCCCATCTTCGCATGGACACACTGGCGACCTGCAGACTTCCGAGAAAGAACTAGAAGAGCAGGACGCCGAT ATGTTGAATGCCGCTCACTCCTTCATTGAATCAAAAGAGTTTGCGCGTGCCATCCACGTCCTGCAGGGTGCCCGG AGTGGGAAGGCGAGTTTCATCAGAGTGTACAGCAAATTCATGGCAAATGAAAAGAAAGCCGTGCGGGATTGGCAC AAGCTGGATAATAATCGACTACAGCCACCCGTTCCGGTGGATAATACTCTGAGTGAACTTCTTAATGAGGTACAT GATACCGAAGACCCTTGGCTATTGTTCCTTAAAGCACTCTTTCTCTCGCGGCTCTCACGTCGGGAAGAAGCGATG GAGTGTGCGTTGTTGTCTATTGCCGGTCTACCTTGGAATTGGTCCTGTTGGACACTTCTGGGAAGCTGCATCGGT GATGGAGAAGAGCTGTCATCCCTTCTTCAATTGGTGCCGTTAAGTCCGACACACCCATTGGTTCACATGTTCCAA ATCAAAACTCTTAGTGAGCTTCACCAGCCAACTGAAAACGAGTTGGCTCTTTGTGATCGCCTCTTGAGCGCGGAC TTCTTTCCAAATAGCGCGTGGCTCATGAGCTTGCGTGCCTGCGTTCTTTATCACTTACATGAGTTTGGACAAGCC GAGCAACAATTCGAAAAAATTTTGGCTCAGGATCCTTACCGGATTGATGACATTGACATCTATTCGAATATTCTC TATGTCACTGATAACAAACTCAAGCTTTCGCGACTTGCACACGAATTCTTGGCATTGGACAAAGATAGGCCCGAG ATTTGCTGTCTTGTAGGGAATCATTACTCACTTCGTGCAGAACATGAGAAAGCGGTGAAATATTTCCGAAGAGCC ACGCAGCTTGATCGAACATATCTTTCGGCGTGGACACTGATGGGACACGAGTACGTAGAAATGAAGAATTCGCAT GCTGCTATCGAGGCTTACCGCCGAGCTGTTGATGTCAACCGCAAAGATTACCGAGCATGGTACGGATTAGGTCAA GCCTACGAGCTGCTCAGTATGCATCATTACTCGCTCTATTATTATCGGCATGCAACGGCGTTGAGACCTTATGAT ATCAGGTTGTGGCAAGCTCAGGGCTTGTGCTACGAAGAGATCGGGCGTCGAAGGGAAGCTATTGAATGCTACAAG CGTGCACTGATTCCAGCAGATCCACATGAGATCAACATCAATTTAAAGCTGGCCAATCTGTATTGGTCGTTGGAT GAGCTTCCAGAAGCAGTGGCTTACCACCGACGTGTCGTTGAAGTTTGCCAAGCCAATCTCCGGCCCATCCAAGAG TATGCGAAGTCTTGTCTACAGGTGGCAGAATATCATATGGGGATTTCTGGTGGGGACCTGTACTTAGCCAAGGAA TACCTTGAGCGAGTGGCGAGCAGTAATGCAGAGGATGTGATGAAAGCAACTGAACTACTCAAGGCGGTGAAATCA ACTCTCCAGGCCGGGCACCAGAACGGGGTAGGGTCGGAAAATCAAACCTCGCAGCCATCAGAAGGAGAAACATCG AAAAATTCTGAATCAAGGGAACGTTAA
Transcript	>AgabiH97|046560 ATGGATTCTGCGTTCCATGTAGATGCACAAACTGCTGCTGAGCTGCGTGCCGCAGCCAAGGAATGCTCTGAAAGG GGCCTGGTAGTTGCAACAAAATGGGCCTCAGAACTGCTGCTCGCCCTTCCGCTTTCGAAACGCAGAAATTTGGCT GATTCAGTACCTATACTTCATTATTCAACGTCAACACCAGCCCATTCAAAATCTCACGAGCTTTCTCTCTCGTTT TCTGACGCTCCTTCACCGCTTCCGGCACAGGGTGTGCGACATAATCCGACACATTCTGGTGGTACTATTGTTACT CATGTCCCATCTTCGCATGGACACACTGGCGACCTGCAGACTTCCGAGAAAGAACTAGAAGAGCAGGACGCCGAT ATGTTGAATGCCGCTCACTCCTTCATTGAATCAAAAGAGTTTGCGCGTGCCATCCACGTCCTGCAGGGTGCCCGG AGTGGGAAGGCGAGTTTCATCAGAGTGTACAGCAAATTCATGGCAAATGAAAAGAAAGCCGTGCGGGATTGGCAC AAGCTGGATAATAATCGACTACAGCCACCCGTTCCGGTGGATAATACTCTGAGTGAACTTCTTAATGAGGTACAT GATACCGAAGACCCTTGGCTATTGTTCCTTAAAGCACTCTTTCTCTCGCGGCTCTCACGTCGGGAAGAAGCGATG GAGTGTGCGTTGTTGTCTATTGCCGGTCTACCTTGGAATTGGTCCTGTTGGACACTTCTGGGAAGCTGCATCGGT GATGGAGAAGAGCTGTCATCCCTTCTTCAATTGGTGCCGTTAAGTCCGACACACCCATTGGTTCACATGTTCCAA ATCAAAACTCTTAGTGAGCTTCACCAGCCAACTGAAAACGAGTTGGCTCTTTGTGATCGCCTCTTGAGCGCGGAC TTCTTTCCAAATAGCGCGTGGCTCATGAGCTTGCGTGCCTGCGTTCTTTATCACTTACATGAGTTTGGACAAGCC GAGCAACAATTCGAAAAAATTTTGGCTCAGGATCCTTACCGGATTGATGACATTGACATCTATTCGAATATTCTC TATGTCACTGATAACAAACTCAAGCTTTCGCGACTTGCACACGAATTCTTGGCATTGGACAAAGATAGGCCCGAG ATTTGCTGTCTTGTAGGGAATCATTACTCACTTCGTGCAGAACATGAGAAAGCGGTGAAATATTTCCGAAGAGCC ACGCAGCTTGATCGAACATATCTTTCGGCGTGGACACTGATGGGACACGAGTACGTAGAAATGAAGAATTCGCAT GCTGCTATCGAGGCTTACCGCCGAGCTGTTGATGTCAACCGCAAAGATTACCGAGCATGGTACGGATTAGGTCAA GCCTACGAGCTGCTCAGTATGCATCATTACTCGCTCTATTATTATCGGCATGCAACGGCGTTGAGACCTTATGAT ATCAGGTTGTGGCAAGCTCAGGGCTTGTGCTACGAAGAGATCGGGCGTCGAAGGGAAGCTATTGAATGCTACAAG CGTGCACTGATTCCAGCAGATCCACATGAGATCAACATCAATTTAAAGCTGGCCAATCTGTATTGGTCGTTGGAT GAGCTTCCAGAAGCAGTGGCTTACCACCGACGTGTCGTTGAAGTTTGCCAAGCCAATCTCCGGCCCATCCAAGAG TATGCGAAGTCTTGTCTACAGGTGGCAGAATATCATATGGGGATTTCTGGTGGGGACCTGTACTTAGCCAAGGAA TACCTTGAGCGAGTGGCGAGCAGTAATGCAGAGGATGTGATGAAAGCAACTGAACTACTCAAGGCGGTGAAATCA ACTCTCCAGGCCGGGCACCAGAACGGGGTAGGGTCGGAAAATCAAACCTCGCAGCCATCAGAAGGAGAAACATCG AAAAATTCTGAATCAAGGGAACGTTAA
Gene	>AgabiH97|046560 ATGGATTCTGCGTTCCATGTAGATGCACAAACTGCTGCTGAGCTGCGTGCCGCAGCCAAGGAATGCTCTGAAAGG GGCCTGGTAGTTGCAACAAAATGGTGCGTTTCCGATTATTTCGTGGTATTGTACTGAGGAGCTGCTGTAGGGCCT CAGAACTGCTGCTCGCCCTTCCGCTTTCGAAACGCAGAAATTTGGCTGATTCAGTACCTATACTTCATTATTCAA CGTCAACACCAGCCCATTCAAAATCTCACGAGCTTTCTCTCTCGTTTTCTGACGCTCCTTCACCGCTTCCGGCAC AGGGTGTGCGACATAATCCGACACATTCTGGTGGTACTATTGTTACTCATGTCCCATCTTCGCATGGACACACTG GCGACCTGCAGACTTCCGAGAAAGAACTAGAAGAGCAGGACGCCGATATGTTGAATGCCGCTCACTCCTTCATTG AATCAAAAGAGTTTGCGCGTGCCATCCACGTCCTGCAGGGTGCCCGGAGTGGGAAGGCGAGTTTCATCAGAGTGT ACAGCAAATTCATGGTGGGATTGCCACTGAATATAGTGCGCGTAAATTCTTAATCAGAGTTCAACGCCTAGGCAA ATGAAAAGAAAGCCGTGCGGGATTGGCACAAGCTGGATAGTAAGTTGCACTGCTTCCAGTTTCGCAGTCATAGGT TTCTCAACCGATCAGATAATCGACTACAGCCACCCGTTCCGGTGGATAATACTCTGAGTGAACTTCTTAATGAGG TACATGATACCGAAGACCCTTGGCTATTGTTCCTGTGTGCCCAGCATAACATTCTCATATCCACACGATGCTGAT CTCTGATAGTAAAGCACTCTTTCTCTCGCGGCTCTCACGTCGGGAAGAAGCGATGGAGTGTGCGTTGTTGTCTAT TGCCGGTCTACCTTGGAATTGGTCCTGTTGGACACTTCTGGGAAGCTGCATCGGTGATGGAGAAGAGGTGACCGA GAGTATCCCAATAGTTGGTATTCGCTAACTTCCCGGTTCCAGCTGTCATCCCTTCTTCAATTGGTGCCGTTAAGT CCGACACACCCATTGGTTCACATGTTCCAAATCAAAACTCTTAGTGAGCTTCACCAGCCAACTGAAAACGAGTTG GCTCTTTGTGATCGCCTCTTGAGCGCGGACTTCTTTCCAAATAGCGCGTGGCTCATGAGCTTGCGTGCCTGCGTT CTTTATCACTTACATGGTTAATCTTCCGCGTTGTCTTGCTTCTTCATCACTGAGGATTCTCTCAGAGTTTGGACA AGCCGAGCAACAATTCGAAAAAATTTTGGCTCAGGATCCTTACCGGATTGATGACATTGACATCTATTCGAATAT TCTCTATGTCACTGATAACAAACTCAAGCTTTCGCGACTTGCACACGAATTCTTGGCATTGGACAAAGATAGGCC CGAGATTTGCTGTCTTGTAGGTGAGAAAAGATCTGATTGTTCGATTGAAAATTTTCTAATATGACGCACAGGGAA TCATTACTCACTTCGTGCAGAACATGAGAAAGCGGTGAAATATTTCCGAAGAGCCACGCAGCTTGATCGAACATA TCTTTCGGCGTGGACACTGATGGGACACGAGTACGTAGAAATGAAGAATTCGCATGCTGCTATCGAGGCTTACCG CCGAGCTGTTGGTAAAGCTTCTTCTTCCAGATTTGGGGTACTCTTTTCTCAAAGTTGTGACTAGATGTCAACCGC AAAGATTACCGAGCATGGTACGGATTAGGTCAAGCCTACGAGCTGCTCAGTATGCATCATTACTCGCTCTATTAT TATCGGCATGCAACGGCGTTGAGGTGCGAACGTTTCCGCTTAGTGCAGGTACAAAATTTTCACTACTTGTCACAG ACCTTATGATATCAGGTTGTGGCAAGCTCAGGGCTTGTGCTACGAAGAGATCGGGCGGTATTTTTCTGTCCCCGA GCTGTGACTTCTACGAGCTGACTGTTCGTGTGGTCCTCTCAGTCGAAGGGAAGCTATTGAATGCTACAAGCGTGC ACTGATTCCAGCAGATCCACATGAGATCAACATCAATTTAAAGCTGGCCAATCTGTATTGGTCGTTGGATGAGCT TCCAGAAGCAGTGGCTTACCACCGACGTGTCGTTGAAGTTTGCCAAGCCAATCGTTGAGTGTTACCACCACCGTG GGCCGTTGTAAATTTCGTTGACTAACATGTTTCCAGTCCGGCCCATCCAAGAGTATGCGAAGTCTTGTCTACAGG TGGCAGAATATCATATGGGGATTTCTGGTGGGGACCTGTACTTAGCCAAGGAATACCTTGAGCGAGTGGCGAGCA GTAATGCAGAGGATGTGATGAAAGCAACTGAACTACTCAAGGCGGTGAAATCAACTCTCCAGGCCGGGCACCAGA ACGGGGTAGGGTCGGAAAATCAAACCTCGCAGCCATCAGAAGGAGAAACATCGAAAAATTCTGAATCAAGGGAAC GTTAA