Protein ID | AgabiH97|046290 |
Gene name | |
Location | scaffold_2:1922495..1926053 |
Strand | + |
Gene length (bp) | 3558 |
Transcript length (bp) | 2868 |
Coding sequence length (bp) | 2868 |
Protein length (aa) | 956 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF09451 | ATG27 | Autophagy-related protein 27 | 1.1E-59 | 158 | 418 |
PF17390 | Bac_rhamnosid_C | Bacterial alpha-L-rhamnosidase C-terminal domain | 2.2E-05 | 66 | 123 |
PF01693 | Cauli_VI | Caulimovirus viroplasmin | 1.9E-04 | 468 | 509 |
Swissprot ID | Swissprot Description | Start | End | E-value |
---|---|---|---|---|
sp|Q6CBS9|ATG27_YARLI | Autophagy-related protein 27 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=ATG27 PE=3 SV=1 | 158 | 422 | 1.0E-20 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 24 | 0.45 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 350 | 372 | 22 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >AgabiH97|046290 MLYTNLSVQSTLLEGFTANGSLGYRAAAGYDFDHSYTSHSHGWATGPTPAMTFHILGIGITSPQGKTWSISPVLS GLQSAEGGLETGLGWFGVKWEVSDSMLSVAVSTPLGTSGTVRLPGEGPVTVDGIVQTGINVDFALFSSLDAQRQL FLANGWTLAEEQAAFDCHVATEGANFDLTGLSGEHTLNRTRNTPPTKMVDSLRFNLCSDLKPQEDVAEGDQCPKG ARACLTSVNQKSQESDRIISVITLAMASSTRSVTAGLSDPKFISILFAGPEYSSPSESTPTKQFLNVTVHCDPNS KSDPIFLSYDDSLLALEWRAPGGCPSEQSPEPPKDHDDKDDPKEENVGSGLGWFFLVILLAFVAYFGLGAYYNYS TYGARGKDLIPHRDFWQEVPYMLKDVISHLCSSVHPRRSSRGGYVALMNNNDLILRENASKNDLGSAMTLCRSYC PKRRKHINAKALLPMVKKYYVIIVGVDPGVYFDYWVEVAPLVKNHPSSIYQKVETEEEAWRLFENASLKGQVRAL SFPPGSTASPGSQTTSTRKSPSSSVSNAHHSSPTPASKLTRSRSDTQARNGASPGRFNLRDPNTVSAAGRTTTSL NRVITLSKTHSEPNPTASAFDSLKKVYVQQHTASNGIEASSNVDVPNTPFRTRVESPPWLASYPDDEIESSISSI SPALGPIASPVISSRSFGPCSPVPFSTPRHDREAVEHTGYDSSEPVKSPTPSFRRREVRGSRNCGIDQTTESKLN AASGGLSKNSRCNGEVPKFQGDVDPFVQLVVDEVLKRLRPSPRVEDELLPDSSSKRPSRPNGHNSNARSERQNGR KEVSSPGSHSQRSAPSPTSGAKSLLSPGAPNGSVLFHRSRDNSGSFRNGPLKRNGLCQQCNGTGYDVGVAVSVLD EAGLNQPNLAPFQPYDTVQDPRSPLITGLKKLASPFTFRRPSPIVSKNLSANTSF* |
Coding | >AgabiH97|046290 ATGTTGTACACCAACTTGTCGGTGCAGTCCACCCTGCTTGAGGGATTCACCGCCAACGGTTCATTGGGATATCGC GCAGCAGCAGGCTACGACTTTGATCATTCATACACGAGCCATAGCCACGGCTGGGCAACAGGTCCGACTCCGGCT ATGACGTTCCATATCCTCGGAATTGGAATAACGTCTCCTCAAGGAAAAACATGGAGCATAAGTCCTGTCCTGAGT GGGCTTCAATCTGCTGAGGGAGGCCTAGAAACGGGGCTCGGATGGTTTGGAGTGAAGTGGGAAGTGAGCGACAGT ATGCTGAGTGTGGCGGTCTCAACCCCACTTGGAACATCGGGGACGGTGAGGCTGCCTGGGGAGGGGCCGGTGACG GTGGACGGAATAGTACAGACAGGAATCAATGTCGACTTTGCTCTGTTCTCGAGTCTCGACGCTCAACGTCAACTC TTCCTTGCTAATGGCTGGACCTTGGCAGAGGAACAGGCTGCATTCGATTGTCATGTCGCCACTGAGGGCGCAAAC TTTGATTTGACAGGGCTCTCTGGCGAGCATACGTTAAACCGGACAAGGAACACACCGCCAACGAAGATGGTGGAT TCCCTGCGGTTCAATCTCTGCTCAGACCTCAAACCCCAGGAGGACGTTGCGGAAGGCGACCAATGTCCTAAAGGA GCCCGTGCTTGTTTGACTAGTGTGAATCAGAAATCTCAAGAATCCGATCGTATAATTTCAGTCATCACCCTTGCA ATGGCTTCCTCTACACGCTCCGTAACCGCTGGACTGTCTGATCCCAAATTCATCTCTATCTTGTTTGCCGGCCCC GAGTACTCGTCACCCTCTGAGTCTACTCCAACAAAACAGTTTCTGAACGTCACGGTACATTGTGACCCGAATTCA AAGTCTGATCCCATTTTTCTCTCCTACGACGACTCGTTGCTCGCTTTAGAATGGCGGGCGCCCGGTGGTTGTCCA TCCGAACAAAGTCCAGAGCCTCCGAAAGACCATGATGACAAGGATGATCCTAAGGAAGAGAATGTAGGCAGTGGG CTGGGATGGTTCTTCTTAGTAATACTCTTGGCATTCGTGGCTTATTTTGGTCTGGGAGCTTACTATAACTATTCG ACATATGGTGCTAGAGGCAAAGACCTTATTCCACACCGAGATTTCTGGCAGGAAGTGCCCTATATGCTCAAGGAC GTTATCTCCCATCTTTGTTCGTCAGTGCATCCACGGCGATCATCCAGAGGGGGCTATGTTGCTTTAATGAATAAT AATGACTTGATTCTTCGAGAAAATGCGTCGAAGAACGATCTAGGGAGTGCTATGACGTTATGTCGAAGCTACTGC CCGAAAAGGAGGAAACATATCAACGCGAAGGCGCTGCTCCCAATGGTGAAGAAATACTATGTCATTATCGTTGGA GTCGATCCTGGTGTATATTTCGACTATTGGGTAGAAGTCGCGCCTCTGGTGAAGAATCACCCGAGTTCTATTTAC CAAAAGGTGGAGACTGAGGAAGAGGCGTGGAGGCTGTTTGAGAATGCTAGCCTTAAAGGACAGGTTCGAGCCCTG TCGTTTCCGCCCGGCTCAACCGCCTCGCCTGGGTCTCAGACCACTTCAACACGGAAGTCGCCAAGTAGTTCGGTT TCCAATGCCCACCACTCGTCGCCTACACCTGCCTCCAAACTGACTAGGTCTCGTTCTGATACGCAAGCGCGGAAT GGTGCTTCTCCTGGACGCTTCAACTTGAGGGACCCGAATACTGTCTCTGCAGCTGGGAGAACGACCACCAGTCTA AATCGCGTGATAACTCTTTCAAAAACTCATTCTGAACCAAATCCTACTGCGTCCGCATTTGACTCCCTAAAAAAG GTTTATGTACAACAGCACACTGCCTCGAATGGAATAGAAGCGTCCTCAAATGTCGATGTACCCAACACGCCATTT CGTACCAGGGTGGAATCACCGCCTTGGTTAGCGTCATACCCAGACGATGAAATTGAATCATCTATATCATCTATT TCGCCTGCCTTAGGTCCTATAGCTTCCCCAGTCATTTCATCCAGGTCATTCGGGCCCTGTAGCCCTGTACCTTTC TCCACACCTCGACATGACAGGGAAGCTGTGGAACATACTGGTTATGATTCTTCCGAGCCGGTGAAGTCACCCACA CCTTCTTTCCGTCGGCGGGAGGTTCGGGGAAGCAGGAATTGCGGAATAGATCAGACAACTGAAAGCAAGTTGAAT GCAGCATCAGGAGGATTGTCAAAGAATTCCCGTTGTAATGGAGAAGTTCCTAAATTTCAAGGCGACGTGGATCCA TTCGTTCAGCTTGTTGTTGACGAAGTCTTGAAGCGCCTCCGTCCTTCCCCCAGGGTTGAGGATGAGTTGTTGCCT GACAGTAGCTCAAAGCGCCCTTCTAGGCCAAACGGCCATAATAGCAACGCTCGGTCAGAGAGGCAGAATGGAAGG AAGGAAGTTTCATCCCCAGGCTCACATTCACAAAGAAGCGCGCCATCACCCACCTCAGGAGCAAAAAGCTTGCTT AGTCCAGGTGCACCTAATGGTTCTGTTTTGTTCCACCGCAGCCGTGATAACTCGGGGTCCTTTAGAAATGGTCCT CTGAAACGAAACGGACTTTGTCAACAATGCAACGGAACAGGCTATGATGTCGGAGTTGCTGTCTCTGTTTTAGAT GAAGCAGGGTTGAATCAACCGAATCTCGCTCCCTTTCAGCCGTATGATACTGTCCAGGATCCCAGGTCACCACTG ATCACAGGCTTGAAGAAACTGGCGAGCCCTTTCACATTTCGTCGACCTTCGCCTATCGTCTCGAAAAATTTATCT GCAAACACGAGTTTTTGA |
Transcript | >AgabiH97|046290 ATGTTGTACACCAACTTGTCGGTGCAGTCCACCCTGCTTGAGGGATTCACCGCCAACGGTTCATTGGGATATCGC GCAGCAGCAGGCTACGACTTTGATCATTCATACACGAGCCATAGCCACGGCTGGGCAACAGGTCCGACTCCGGCT ATGACGTTCCATATCCTCGGAATTGGAATAACGTCTCCTCAAGGAAAAACATGGAGCATAAGTCCTGTCCTGAGT GGGCTTCAATCTGCTGAGGGAGGCCTAGAAACGGGGCTCGGATGGTTTGGAGTGAAGTGGGAAGTGAGCGACAGT ATGCTGAGTGTGGCGGTCTCAACCCCACTTGGAACATCGGGGACGGTGAGGCTGCCTGGGGAGGGGCCGGTGACG GTGGACGGAATAGTACAGACAGGAATCAATGTCGACTTTGCTCTGTTCTCGAGTCTCGACGCTCAACGTCAACTC TTCCTTGCTAATGGCTGGACCTTGGCAGAGGAACAGGCTGCATTCGATTGTCATGTCGCCACTGAGGGCGCAAAC TTTGATTTGACAGGGCTCTCTGGCGAGCATACGTTAAACCGGACAAGGAACACACCGCCAACGAAGATGGTGGAT TCCCTGCGGTTCAATCTCTGCTCAGACCTCAAACCCCAGGAGGACGTTGCGGAAGGCGACCAATGTCCTAAAGGA GCCCGTGCTTGTTTGACTAGTGTGAATCAGAAATCTCAAGAATCCGATCGTATAATTTCAGTCATCACCCTTGCA ATGGCTTCCTCTACACGCTCCGTAACCGCTGGACTGTCTGATCCCAAATTCATCTCTATCTTGTTTGCCGGCCCC GAGTACTCGTCACCCTCTGAGTCTACTCCAACAAAACAGTTTCTGAACGTCACGGTACATTGTGACCCGAATTCA AAGTCTGATCCCATTTTTCTCTCCTACGACGACTCGTTGCTCGCTTTAGAATGGCGGGCGCCCGGTGGTTGTCCA TCCGAACAAAGTCCAGAGCCTCCGAAAGACCATGATGACAAGGATGATCCTAAGGAAGAGAATGTAGGCAGTGGG CTGGGATGGTTCTTCTTAGTAATACTCTTGGCATTCGTGGCTTATTTTGGTCTGGGAGCTTACTATAACTATTCG ACATATGGTGCTAGAGGCAAAGACCTTATTCCACACCGAGATTTCTGGCAGGAAGTGCCCTATATGCTCAAGGAC GTTATCTCCCATCTTTGTTCGTCAGTGCATCCACGGCGATCATCCAGAGGGGGCTATGTTGCTTTAATGAATAAT AATGACTTGATTCTTCGAGAAAATGCGTCGAAGAACGATCTAGGGAGTGCTATGACGTTATGTCGAAGCTACTGC CCGAAAAGGAGGAAACATATCAACGCGAAGGCGCTGCTCCCAATGGTGAAGAAATACTATGTCATTATCGTTGGA GTCGATCCTGGTGTATATTTCGACTATTGGGTAGAAGTCGCGCCTCTGGTGAAGAATCACCCGAGTTCTATTTAC CAAAAGGTGGAGACTGAGGAAGAGGCGTGGAGGCTGTTTGAGAATGCTAGCCTTAAAGGACAGGTTCGAGCCCTG TCGTTTCCGCCCGGCTCAACCGCCTCGCCTGGGTCTCAGACCACTTCAACACGGAAGTCGCCAAGTAGTTCGGTT TCCAATGCCCACCACTCGTCGCCTACACCTGCCTCCAAACTGACTAGGTCTCGTTCTGATACGCAAGCGCGGAAT GGTGCTTCTCCTGGACGCTTCAACTTGAGGGACCCGAATACTGTCTCTGCAGCTGGGAGAACGACCACCAGTCTA AATCGCGTGATAACTCTTTCAAAAACTCATTCTGAACCAAATCCTACTGCGTCCGCATTTGACTCCCTAAAAAAG GTTTATGTACAACAGCACACTGCCTCGAATGGAATAGAAGCGTCCTCAAATGTCGATGTACCCAACACGCCATTT CGTACCAGGGTGGAATCACCGCCTTGGTTAGCGTCATACCCAGACGATGAAATTGAATCATCTATATCATCTATT TCGCCTGCCTTAGGTCCTATAGCTTCCCCAGTCATTTCATCCAGGTCATTCGGGCCCTGTAGCCCTGTACCTTTC TCCACACCTCGACATGACAGGGAAGCTGTGGAACATACTGGTTATGATTCTTCCGAGCCGGTGAAGTCACCCACA CCTTCTTTCCGTCGGCGGGAGGTTCGGGGAAGCAGGAATTGCGGAATAGATCAGACAACTGAAAGCAAGTTGAAT GCAGCATCAGGAGGATTGTCAAAGAATTCCCGTTGTAATGGAGAAGTTCCTAAATTTCAAGGCGACGTGGATCCA TTCGTTCAGCTTGTTGTTGACGAAGTCTTGAAGCGCCTCCGTCCTTCCCCCAGGGTTGAGGATGAGTTGTTGCCT GACAGTAGCTCAAAGCGCCCTTCTAGGCCAAACGGCCATAATAGCAACGCTCGGTCAGAGAGGCAGAATGGAAGG AAGGAAGTTTCATCCCCAGGCTCACATTCACAAAGAAGCGCGCCATCACCCACCTCAGGAGCAAAAAGCTTGCTT AGTCCAGGTGCACCTAATGGTTCTGTTTTGTTCCACCGCAGCCGTGATAACTCGGGGTCCTTTAGAAATGGTCCT CTGAAACGAAACGGACTTTGTCAACAATGCAACGGAACAGGCTATGATGTCGGAGTTGCTGTCTCTGTTTTAGAT GAAGCAGGGTTGAATCAACCGAATCTCGCTCCCTTTCAGCCGTATGATACTGTCCAGGATCCCAGGTCACCACTG ATCACAGGCTTGAAGAAACTGGCGAGCCCTTTCACATTTCGTCGACCTTCGCCTATCGTCTCGAAAAATTTATCT GCAAACACGAGTTTTTGA |
Gene | >AgabiH97|046290 ATGTTGTACACCAACTTGTCGGTGCAGTCCACCCTGCTTGAGGGATTCACCGCCAACGGTTCATTGGGGTGAGTT CAGAGAGTCAAATGACACTTGCTCTGGCTTAGTGGCCATTCAGATATCGCGCAGCAGCAGGCTACGACTTTGATC ATTCATACACGAGCCATAGCCACGGCTGGGCAACAGGTCCGACTCCGGCTATGACGTTCCATATCCTCGGAATTG GAATAACGTCTCCTCAAGGAAAAACATGGAGCATAAGTCCTGTCCTGAGTGGGCTTCAATCTGCTGAGGGAGGCC TAGAAACGGGGCTCGGATGGTTTGGAGTGAAGTGGGAAGTGAGCGACAGTATGCTGAGTGTGGCGGTCTCAACCC CACTTGGAACATCGGGGACGGTGAGGCTGCCTGGGGAGGGGCCGGTGACGGTGGACGGAATAGTACAGACAGGAA TCAATGTCGAGTTGAGCGGAGGCGAGCACGTCCTGACGAGGCATGTGTAGTCACGTGATATGAATCATAACTAGC TTTGCTCTGTTCTCGAGTCTCGACGCTCAACGTCAACTCTTCCTTGCTAATGGTCCGCTGGGGCTCGCTCCCGTG CTCGTCCCTTCTAACAGCCATCGTTTATCTCCTGCTGCTGCCAGGCTGGACCTTGGCAGAGGAACAGGCTGCATT CGATTGTCATGTCGCCACTGAGGGCGCAAACTTTGATTTGACAGGGCTCTCTGGCGAGCATACGTTAAACCGGAC AAGGAACACACCGCCAACGAAGATGGTGGATTCCCTGCGGTTCAATCTCTGCTCAGACCTCAAACCCCAGGAGGA CGTTGCGGAAGGCGACCAAGTGGGTGGTAGACAATGAGTCTGGTATCTCCTCTTTGCTCATCTTCATTGCACCTA GTGTCCTAAAGGAGCCCGTGCTTGTTTGACTAGTGTGAATCAGAAATCTCAAGAATCCGATCGTATAATTTCAGT CATCACCCTTGCAATGGCTTCCTCTACACGCTCCGTAACCGCTGGACTGTCTGGTCAGTGATCTGAATTGAAAGT TCTTTCTATTCCCGCTCAAAAGAAAAACTTGGGTATTCAGATCCCAAATTCATCTCTATCTTGTTTGCCGGCCCC GAGTACTCGTCACCCTCTGAGTCTACTCCAACAAAACAGTTTCTGAACGTCACGGTACATTGTGACCCGAATTCA AAGTCTGATCCCATTTTTCTCTCCTACGACGACTCGTTGCTCGCTTTAGAATGGCGGGCGCCCGGTGGTTGTCCA TCCGAACAAAGTCCAGAGCCTCCGAAAGACCATGATGACAAGGATGATCCTAAGGAAGAGAATGTAGGCAGTGGG CTGGGATGGTTCTTCTTAGTGTACGCGATTCCATTCCATTTCGCGATGACTTTCTGTCCTCATAATTTTGCGCAG AATACTCTTGGCATTCGTGGCTTATTTTGGTCTGGGAGCTTACTATAACTATTCGACATATGGTGCTAGAGGCAA AGACCTTATTCCGTGGGTCCATTCCCTTCAGTCACTCGCCCTACTGACATGACCTCTTGTTAGACACCGAGATTT CTGGCAGGAAGTGCCCTATATGCTCAAGGACGTTATCTCCCATCTTTGTTCGTCAGTGCATCCACGGCGATCATC CAGAGGGGGCTATGTTGCTGTATGAGTGTCTGCAAGGATGAAGGGTCAGTAGTGCTGCGACGGAGAAATGGTTTA TTGGACTAGCTTATAGGGTAGTTTTGTAGTTAATGAATAATAATGACTTGATTCTTCGAGAAAATGCGTCGAAGA ACGATCTAGGGAGTGCTATGACGTTATGTCGAAGCTACTGCCCGAAAAGGAGGAAACATATCAACGCGAAGGCGC TGGTCTGTTCTTTGCTCCCACGTCTCTCCTTGACCGTTATCGTCCGAGTGTAAGCTCCCAATGGTGAAGAAATAC TATGTCATTATCGTTGGAGTCGATCCTGGTGTATATTTCGACTATTGGTGTGTTCTAATTCAAGTCCTGTGTCTG TATTCTTTTTGACATTGCTTCAGGGTAGAAGTCGCGCCTCTGGTGAAGAATCACCCGAGTTCTATTTACCAAAAG GTGGAGACTGAGGAAGAGGCGTGGAGGCTGTTTGAGAATGCTAGCCTTAAAGGACAGGTTCGAGCCCTGTCGTTT CCGCCCGGCTCAACCGCCTCGCCTGGGTCTCAGACCACTTCAACACGGAAGTCGCCAAGTAGTTCGGTTTCCAAT GCCCACCACTCGTCGCCTACACCTGCCTCCAAACTGACTAGGTCTCGTTCTGATACGCAAGCGCGGAATGGTGCT TCTCCTGGACGCTTCAACTTGAGGGACCCGAATACTGTCTCTGCAGCTGGGAGAACGACCACCAGTCTAAATCGC GTGATAACTCTTTCAAAAACTCATTCTGAACCAAATCCTACTGCGTCCGCATTTGACTCCCTAAAAAAGGTTTAT GTACAACAGCACACTGCCTCGAATGGAATAGAAGCGTCCTCAAATGTCGATGTACCCAACACGCCATTTCGTACC AGGGTGGAATCACCGCCTTGGTTAGCGTCATACCCAGACGATGAAATTGAATCATCTATATCATCTATTTCGCCT GCCTTAGGTCCTATAGCTTCCCCAGTCATTTCATCCAGGTCATTCGGGCCCTGTAGCCCTGTACCTTTCTCCACA CCTCGACATGACAGGGAAGCTGTGGAACATACTGGTTATGATTCTTCCGAGCCGGTGAAGTCACCCACACCTTCT TTCCGTCGGCGGGAGGTTCGGGGAAGCAGGAATTGCGGAATAGATCAGACAACTGAAAGCAAGTTGAATGCAGCA TCAGGAGGATTGTCAAAGAATTCCCGTTGTAATGGAGAAGTTCCTAAATTTCAAGGCGACGTGGATCCATTCGTT CAGCTTGTTGTTGACGAAGTCTTGAAGCGCCTCCGTCCTTCCCCCAGGGTTGAGGATGAGTTGTTGCCTGACAGT AGCTCAAAGCGCCCTTCTAGGCCAAACGGCCATAATAGCAACGCTCGGTCAGAGAGGCAGAATGGAAGGAAGGAA GTTTCATCCCCAGGCTCACATTCACAAAGAAGCGCGCCATCACCCACCTCAGGAGCAAAAAGCTTGCTTAGTCCA GGTGCACCTAATGGTTCTGTTTTGTTCCACCGCAGCCGTATGTTTCTTCTGTGCGCCAGATTGCGTTGACTAAAG AAGATCCCTAGGTGATAACTCGGGGTCCTTTAGAAATGGTCCTCTGAAACGAAACGGACTTTGTCAACAATGCAA CGGAACAGGCTATGATGTCGGAGTTGCTGTCTCTGTTTTAGATGAAGCAGGGTTGAATCAACCGAATCTCGCTCC CTTTCAGCCGTATGATACTGTCCAGGATCCCAGGTCACCACTGATCACAGGCTTGAAGAAACTGGCGAGGTTCGT TTTCCTCTGTTAAAAGTCGCCCAATGACTCAACCCGCTTAGCCCTTTCACATTTCGTCGACCTTCGCCTATCGTC TCGAAAAATTTATCTGCAAACACGAGTTTTTGA |