Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabiH97|045270
Gene name
Locationscaffold_2:1667987..1669613
Strand-
Gene length (bp)1626
Transcript length (bp)1566
Coding sequence length (bp)1566
Protein length (aa) 522

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 22 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Developmental stages of Agaricus bisporus (strain A15). Published in Pelkmans et al, Applied Microbiology and Biotechnology, 2016

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >AgabiH97|045270
MYPSPPHSLLALPILTVLVGAGWQLRSKRWNWPLRQRGTGRKGGARRMETKERRELKQWPGRSKRRNRARQHHMA
LDPQLKAHSQPALDVSGSVANGTSRKDWSTQKVQSSVLIGSGVRVAKAAHTPSDTSAQAVEALSMEPKPASLPKT
LTISTPYAWEVWQGFLNRFNLSERYPSFIDNLRYGFVAGIPAITSTLAPFNHPSVVQYSNQLLSIVQQEFAKGRY
FGPYLEAQVVDLIGLFQSSPLSIIPKPGKPGKFRLIQNFSHLYTATLGRASVNSYIDPAEFPCTWGTFTTVALII
SRLPEGSEAATRDVKEAYRTVPIHPTQWPGMVIRLPGSNSFAIDTRDTFGLSSGAGLYGEVVDAGLDIMRAIGIG
PVTKWVDDHLFFRVPRASLQTYNALRQSAATVIKQSQGRVHQNGRIWYKGNRLPDDRLEEYSEDMTFPLKDLASC
SPRSSHDGSFTYSLEDIDDLSQKLGIPWEREKDQPFSSKVTYIGLDWDLNKKTVALSEKKKQKYLDEIKEW*
Coding >AgabiH97|045270
ATGTACCCCTCTCCCCCTCACTCTCTCCTTGCCCTTCCCATTCTTACTGTGCTCGTGGGAGCAGGCTGGCAGCTC
AGATCGAAGCGCTGGAATTGGCCTCTCCGACAAAGGGGCACAGGCAGAAAAGGGGGCGCCAGGAGGATGGAGACC
AAGGAGAGGAGAGAGCTAAAGCAGTGGCCCGGCCGTTCAAAAAGGCGAAATCGGGCTCGTCAACACCACATGGCT
CTGGACCCTCAACTCAAAGCTCACTCTCAGCCTGCACTAGATGTCTCGGGCTCCGTTGCGAATGGAACAAGCAGA
AAAGACTGGTCAACCCAAAAGGTACAGTCCTCTGTTCTGATTGGCAGCGGCGTCAGGGTTGCAAAAGCAGCTCAC
ACCCCTTCAGACACGAGTGCTCAGGCTGTGGAAGCACTGAGCATGGAGCCCAAACCTGCCAGCTTGCCGAAAACC
CTGACAATTAGCACACCCTACGCGTGGGAAGTGTGGCAGGGTTTCCTCAACCGCTTCAACCTCTCCGAAAGATAC
CCCTCGTTTATAGACAACTTGCGATATGGTTTCGTTGCAGGCATACCTGCAATCACTAGTACCTTAGCCCCCTTT
AATCATCCATCAGTAGTTCAGTACTCTAATCAGCTCCTCAGCATAGTTCAACAAGAGTTTGCGAAAGGCAGATAT
TTTGGACCATATTTGGAAGCACAGGTTGTGGATCTGATTGGCCTGTTCCAGTCGTCGCCCCTGAGCATCATACCC
AAGCCTGGAAAACCTGGCAAATTCAGGTTAATACAGAATTTTTCGCACCTATACACAGCGACCCTAGGCAGGGCT
TCAGTGAACTCCTACATTGACCCTGCAGAATTTCCCTGCACTTGGGGGACGTTTACCACAGTGGCTCTGATCATC
TCGAGACTGCCCGAAGGATCAGAGGCAGCGACAAGAGATGTCAAGGAGGCGTATAGGACTGTCCCAATCCATCCG
ACACAATGGCCAGGAATGGTAATACGGCTACCTGGCTCCAACAGCTTTGCCATTGACACCCGTGACACATTTGGG
CTTTCCTCGGGTGCAGGTCTTTATGGAGAGGTCGTAGATGCGGGTTTAGACATAATGAGAGCCATTGGGATAGGT
CCTGTCACCAAGTGGGTGGATGACCACCTTTTCTTTCGAGTCCCACGAGCATCACTTCAGACGTACAATGCATTA
AGACAAAGTGCAGCAACAGTCATCAAACAATCTCAGGGTCGGGTGCACCAAAACGGTAGAATATGGTACAAGGGC
AACCGATTGCCCGATGACAGACTCGAGGAGTACAGTGAAGACATGACTTTCCCGCTAAAAGACCTAGCGAGCTGC
TCCCCTCGGTCATCTCATGATGGCAGTTTTACATACAGCTTGGAAGATATAGACGATCTATCGCAAAAGCTAGGC
ATCCCTTGGGAGAGAGAGAAGGATCAGCCTTTCAGCTCCAAAGTGACCTATATTGGGTTGGATTGGGATCTCAAC
AAGAAAACAGTCGCATTATCGGAGAAGAAGAAACAAAAGTATCTAGACGAGATAAAGGAGTGGTAG
Transcript >AgabiH97|045270
ATGTACCCCTCTCCCCCTCACTCTCTCCTTGCCCTTCCCATTCTTACTGTGCTCGTGGGAGCAGGCTGGCAGCTC
AGATCGAAGCGCTGGAATTGGCCTCTCCGACAAAGGGGCACAGGCAGAAAAGGGGGCGCCAGGAGGATGGAGACC
AAGGAGAGGAGAGAGCTAAAGCAGTGGCCCGGCCGTTCAAAAAGGCGAAATCGGGCTCGTCAACACCACATGGCT
CTGGACCCTCAACTCAAAGCTCACTCTCAGCCTGCACTAGATGTCTCGGGCTCCGTTGCGAATGGAACAAGCAGA
AAAGACTGGTCAACCCAAAAGGTACAGTCCTCTGTTCTGATTGGCAGCGGCGTCAGGGTTGCAAAAGCAGCTCAC
ACCCCTTCAGACACGAGTGCTCAGGCTGTGGAAGCACTGAGCATGGAGCCCAAACCTGCCAGCTTGCCGAAAACC
CTGACAATTAGCACACCCTACGCGTGGGAAGTGTGGCAGGGTTTCCTCAACCGCTTCAACCTCTCCGAAAGATAC
CCCTCGTTTATAGACAACTTGCGATATGGTTTCGTTGCAGGCATACCTGCAATCACTAGTACCTTAGCCCCCTTT
AATCATCCATCAGTAGTTCAGTACTCTAATCAGCTCCTCAGCATAGTTCAACAAGAGTTTGCGAAAGGCAGATAT
TTTGGACCATATTTGGAAGCACAGGTTGTGGATCTGATTGGCCTGTTCCAGTCGTCGCCCCTGAGCATCATACCC
AAGCCTGGAAAACCTGGCAAATTCAGGTTAATACAGAATTTTTCGCACCTATACACAGCGACCCTAGGCAGGGCT
TCAGTGAACTCCTACATTGACCCTGCAGAATTTCCCTGCACTTGGGGGACGTTTACCACAGTGGCTCTGATCATC
TCGAGACTGCCCGAAGGATCAGAGGCAGCGACAAGAGATGTCAAGGAGGCGTATAGGACTGTCCCAATCCATCCG
ACACAATGGCCAGGAATGGTAATACGGCTACCTGGCTCCAACAGCTTTGCCATTGACACCCGTGACACATTTGGG
CTTTCCTCGGGTGCAGGTCTTTATGGAGAGGTCGTAGATGCGGGTTTAGACATAATGAGAGCCATTGGGATAGGT
CCTGTCACCAAGTGGGTGGATGACCACCTTTTCTTTCGAGTCCCACGAGCATCACTTCAGACGTACAATGCATTA
AGACAAAGTGCAGCAACAGTCATCAAACAATCTCAGGGTCGGGTGCACCAAAACGGTAGAATATGGTACAAGGGC
AACCGATTGCCCGATGACAGACTCGAGGAGTACAGTGAAGACATGACTTTCCCGCTAAAAGACCTAGCGAGCTGC
TCCCCTCGGTCATCTCATGATGGCAGTTTTACATACAGCTTGGAAGATATAGACGATCTATCGCAAAAGCTAGGC
ATCCCTTGGGAGAGAGAGAAGGATCAGCCTTTCAGCTCCAAAGTGACCTATATTGGGTTGGATTGGGATCTCAAC
AAGAAAACAGTCGCATTATCGGAGAAGAAGAAACAAAAGTATCTAGACGAGATAAAGGAGTGGTAG
Gene >AgabiH97|045270
ATGTACCCCTCTCCCCCTCACTCTCTCCTTGCCCTTCCCATTCTTACTGTGCTCGTGGGAGCAGGCTGGCAGCTC
AGATCGAAGCGCTGGAATTGGCCTCTCCGACAAAGGGGCACAGGCAGAAAAGGGGGCGCCAGGAGGATGGAGACC
AAGGAGAGGAGAGAGCTAAAGCAGTGGCCCGGCCGTTCAAAAAGGCGAAATCGGGCTCGTCAACACCACATGGCT
CTGGACCCTCAACTCAAAGCTCACTCTCAGCCTGCACTAGATGTCTCGGGCGTCACCCGCATGACATAGCTAATT
GCGCAGCTACTACCTTATGGGACAAAAACACGCCAGTCCGTTGCGAATGGAACAAGCAGAAAAGACTGGTCAACC
CAAAAGGTACAGTCCTCTGTTCTGATTGGCAGCGGCGTCAGGGTTGCAAAAGCAGCTCACACCCCTTCAGACACG
AGTGCTCAGGCTGTGGAAGCACTGAGCATGGAGCCCAAACCTGCCAGCTTGCCGAAAACCCTGACAATTAGCACA
CCCTACGCGTGGGAAGTGTGGCAGGGTTTCCTCAACCGCTTCAACCTCTCCGAAAGATACCCCTCGTTTATAGAC
AACTTGCGATATGGTTTCGTTGCAGGCATACCTGCAATCACTAGTACCTTAGCCCCCTTTAATCATCCATCAGTA
GTTCAGTACTCTAATCAGCTCCTCAGCATAGTTCAACAAGAGTTTGCGAAAGGCAGATATTTTGGACCATATTTG
GAAGCACAGGTTGTGGATCTGATTGGCCTGTTCCAGTCGTCGCCCCTGAGCATCATACCCAAGCCTGGAAAACCT
GGCAAATTCAGGTTAATACAGAATTTTTCGCACCTATACACAGCGACCCTAGGCAGGGCTTCAGTGAACTCCTAC
ATTGACCCTGCAGAATTTCCCTGCACTTGGGGGACGTTTACCACAGTGGCTCTGATCATCTCGAGACTGCCCGAA
GGATCAGAGGCAGCGACAAGAGATGTCAAGGAGGCGTATAGGACTGTCCCAATCCATCCGACACAATGGCCAGGA
ATGGTAATACGGCTACCTGGCTCCAACAGCTTTGCCATTGACACCCGTGACACATTTGGGCTTTCCTCGGGTGCA
GGTCTTTATGGAGAGGTCGTAGATGCGGGTTTAGACATAATGAGAGCCATTGGGATAGGTCCTGTCACCAAGTGG
GTGGATGACCACCTTTTCTTTCGAGTCCCACGAGCATCACTTCAGACGTACAATGCATTAAGACAAAGTGCAGCA
ACAGTCATCAAACAATCTCAGGGTCGGGTGCACCAAAACGGTAGAATATGGTACAAGGGCAACCGATTGCCCGAT
GACAGACTCGAGGAGTACAGTGAAGACATGACTTTCCCGCTAAAAGACCTAGCGAGCTGCTCCCCTCGGTCATCT
CATGATGGCAGTTTTACATACAGCTTGGAAGATATAGACGATCTATCGCAAAAGCTAGGCATCCCTTGGGAGAGA
GAGAAGGATCAGCCTTTCAGCTCCAAAGTGACCTATATTGGGTTGGATTGGGATCTCAACAAGAAAACAGTCGCA
TTATCGGAGAAGAAGAAACAAAAGTATCTAGACGAGATAAAGGAGTGGTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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