Fungal Genomics

General Properties

Protein ID	AgabiH97|044680
Gene name
Location	scaffold_2:1531552..1532614
Strand	+
Gene length (bp)	1062
Transcript length (bp)	1014
Coding sequence length (bp)	1014
Protein length (aa)	338

Overview

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PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF02045	CBFB_NFYA	CCAAT-binding transcription factor (CBF-B/NF-YA) subunit B	3.9E-27	105	160

Swissprot hits

GO

GO Term	Description	Terminal node
GO:0003700	DNA-binding transcription factor activity	Yes
GO:0006355	regulation of transcription, DNA-templated	Yes
GO:0051171	regulation of nitrogen compound metabolic process	No
GO:0060255	regulation of macromolecule metabolic process	No
GO:0080090	regulation of primary metabolic process	No
GO:0065007	biological regulation	No
GO:0009889	regulation of biosynthetic process	No
GO:0031326	regulation of cellular biosynthetic process	No
GO:0008150	biological_process	No
GO:0019222	regulation of metabolic process	No
GO:0140110	transcription regulator activity	No
GO:2001141	regulation of RNA biosynthetic process	No
GO:0051252	regulation of RNA metabolic process	No
GO:0050794	regulation of cellular process	No
GO:0010556	regulation of macromolecule biosynthetic process	No
GO:0031323	regulation of cellular metabolic process	No
GO:0003674	molecular_function	No
GO:0019219	regulation of nucleobase-containing compound metabolic process	No
GO:0010468	regulation of gene expression	No
GO:1903506	regulation of nucleic acid-templated transcription	No
GO:0050789	regulation of biological process	No

Deeploc

[Help with interpreting the results of Deeploc 2.0]

Localizations	Signals	Cytoplasm	Nucleus	Extracellular	Cell membrane	Mitochondrion	Plastid	Endoplasmic reticulum	Lysosome vacuole	Golgi apparatus	Peroxisome
Nucleus	Nuclear localization signal	0.3575	0.8412	0.0181	0.0265	0.1056	0.0001	0.093	0.0399	0.0431	0.003

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

Transcription Factor Class (based on PFAM domains)
CCAAT-binding TF

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

Analysis 1: Developmental stages of Agaricus bisporus (strain A15). Published in Pelkmans et al, Applied Microbiology and Biotechnology, 2016

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Orthologs

Orthofinder run ID	1
Orthogroup	3737
Change Orthofinder run	1: Agaricomycetes 5: Agaricus - all strains

Species	Protein ID
Agaricus bisporus var bisporus H39	AgabiH39|044680
Agaricus bisporus var bisporus H97	AgabiH97|044680 (this protein)
Rhodonia placenta FPRL280	RhoplFPRL280|114_10

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus Download genbank file of locus (reverse complement) The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>AgabiH97|044680 MDLHDVQQQQQHAVQHSLHPQPHIVHNALHDIHHHQHTQLDHHLHIAQNDQLFRPFYREPDHFQLYNNHDIFQGQ PSDPPTPPSPPKSAAPQSQPPLELANIDDEPLYVNAKQYFRILKRRVARTRLEEVHRLSRQRKPYLHESRHKHAM RRPRGPGGRFLTASEIAAQKLAAQDEPRSAANPAADPDPDDEPEDDDSKPDDSSVSPAPDSEVFMSHQPPPDSMG IINMAYRPIPHHLSHHPPPPSIAMSQSRQPPSPPSIYPQTQPQPQPSQQEPQDKSPSVTLTSPYSVQMHHVPHPH AHARHHHSINPYMYNADAVDPSTDSTEEMIQFSAGPP*
Coding	>AgabiH97|044680 ATGGACCTCCACGACGTCCAGCAACAGCAGCAGCACGCTGTCCAGCACAGCCTGCACCCGCAGCCGCACATCGTC CACAACGCCCTCCACGACATCCACCACCACCAGCACACCCAGCTCGACCACCACCTCCACATCGCACAGAACGAC CAGCTCTTTCGCCCCTTTTACAGAGAGCCAGACCACTTCCAGCTCTACAACAACCACGACATCTTTCAGGGCCAG CCCTCTGATCCTCCCACCCCGCCCTCCCCGCCCAAGTCTGCCGCCCCGCAGTCCCAACCACCCCTCGAGCTCGCA AACATCGACGACGAGCCCCTCTATGTCAACGCAAAGCAGTACTTTCGCATCCTCAAGCGCAGAGTAGCCCGCACC CGCCTCGAAGAGGTCCACCGCCTCTCCCGCCAGCGCAAGCCCTATCTTCACGAATCTCGTCACAAACATGCCATG CGTCGCCCCAGAGGCCCTGGCGGCCGCTTCCTCACCGCAAGCGAGATTGCCGCCCAAAAGCTCGCTGCCCAAGAC GAGCCCCGCTCAGCCGCCAACCCAGCCGCTGACCCCGACCCCGACGACGAACCCGAAGACGACGACTCCAAACCA GACGATTCCTCCGTCAGTCCCGCCCCCGATTCAGAGGTCTTCATGTCTCATCAGCCTCCTCCCGATTCCATGGGC ATCATCAACATGGCCTACCGCCCCATCCCTCACCATCTATCTCACCACCCGCCCCCTCCCTCGATTGCAATGTCC CAATCCCGTCAGCCACCGTCTCCGCCCTCCATCTACCCCCAAACACAGCCGCAACCTCAGCCGTCGCAGCAAGAA CCTCAGGATAAAAGTCCTTCCGTCACTCTCACCTCCCCTTATTCTGTCCAGATGCACCACGTCCCTCACCCCCAT GCACACGCCAGGCATCATCATTCTATCAACCCGTACATGTACAATGCAGACGCCGTCGATCCCAGCACTGACTCG ACGGAGGAGATGATTCAGTTCAGTGCCGGTCCACCTTGA
Transcript	>AgabiH97|044680 ATGGACCTCCACGACGTCCAGCAACAGCAGCAGCACGCTGTCCAGCACAGCCTGCACCCGCAGCCGCACATCGTC CACAACGCCCTCCACGACATCCACCACCACCAGCACACCCAGCTCGACCACCACCTCCACATCGCACAGAACGAC CAGCTCTTTCGCCCCTTTTACAGAGAGCCAGACCACTTCCAGCTCTACAACAACCACGACATCTTTCAGGGCCAG CCCTCTGATCCTCCCACCCCGCCCTCCCCGCCCAAGTCTGCCGCCCCGCAGTCCCAACCACCCCTCGAGCTCGCA AACATCGACGACGAGCCCCTCTATGTCAACGCAAAGCAGTACTTTCGCATCCTCAAGCGCAGAGTAGCCCGCACC CGCCTCGAAGAGGTCCACCGCCTCTCCCGCCAGCGCAAGCCCTATCTTCACGAATCTCGTCACAAACATGCCATG CGTCGCCCCAGAGGCCCTGGCGGCCGCTTCCTCACCGCAAGCGAGATTGCCGCCCAAAAGCTCGCTGCCCAAGAC GAGCCCCGCTCAGCCGCCAACCCAGCCGCTGACCCCGACCCCGACGACGAACCCGAAGACGACGACTCCAAACCA GACGATTCCTCCGTCAGTCCCGCCCCCGATTCAGAGGTCTTCATGTCTCATCAGCCTCCTCCCGATTCCATGGGC ATCATCAACATGGCCTACCGCCCCATCCCTCACCATCTATCTCACCACCCGCCCCCTCCCTCGATTGCAATGTCC CAATCCCGTCAGCCACCGTCTCCGCCCTCCATCTACCCCCAAACACAGCCGCAACCTCAGCCGTCGCAGCAAGAA CCTCAGGATAAAAGTCCTTCCGTCACTCTCACCTCCCCTTATTCTGTCCAGATGCACCACGTCCCTCACCCCCAT GCACACGCCAGGCATCATCATTCTATCAACCCGTACATGTACAATGCAGACGCCGTCGATCCCAGCACTGACTCG ACGGAGGAGATGATTCAGTTCAGTGCCGGTCCACCTTGA
Gene	>AgabiH97|044680 ATGGACCTCCACGACGTCCAGCAACAGCAGCAGCACGCTGTCCAGCACAGCCTGCACCCGCAGCCGCACATCGTC CACAACGCCCTCCACGACATCCACCACCACCAGCACACCCAGCTCGACCACCACCTCCACATCGCACAGAACGAC CAGCTCTTTCGCCCCTTTTACAGAGAGCCAGACCACTTCCAGCTCTACAACAACCACGACATCTTTCAGGGCCAG CCCTCTGATCCTCCCACCCCGCCCTCCCCGCCCAAGTCTGCCGCCCCGCAGTCCCAACCACCCCTCGAGCTCGCA AACATCGACGACGAGCCCCTCTATGTCAACGCAAAGCAGTACTTTCGCATCCTCAAGCGCAGAGTAGCCCGCACC CGCCTCGAAGAGGTCCACCGCCTCTCCCGCCAGCGCAAGGTACATTCGCATCTTCCTCCTCACTAGCCCCATCTG ACTTCTTTCTAGCCCTATCTTCACGAATCTCGTCACAAACATGCCATGCGTCGCCCCAGAGGCCCTGGCGGCCGC TTCCTCACCGCAAGCGAGATTGCCGCCCAAAAGCTCGCTGCCCAAGACGAGCCCCGCTCAGCCGCCAACCCAGCC GCTGACCCCGACCCCGACGACGAACCCGAAGACGACGACTCCAAACCAGACGATTCCTCCGTCAGTCCCGCCCCC GATTCAGAGGTCTTCATGTCTCATCAGCCTCCTCCCGATTCCATGGGCATCATCAACATGGCCTACCGCCCCATC CCTCACCATCTATCTCACCACCCGCCCCCTCCCTCGATTGCAATGTCCCAATCCCGTCAGCCACCGTCTCCGCCC TCCATCTACCCCCAAACACAGCCGCAACCTCAGCCGTCGCAGCAAGAACCTCAGGATAAAAGTCCTTCCGTCACT CTCACCTCCCCTTATTCTGTCCAGATGCACCACGTCCCTCACCCCCATGCACACGCCAGGCATCATCATTCTATC AACCCGTACATGTACAATGCAGACGCCGTCGATCCCAGCACTGACTCGACGGAGGAGATGATTCAGTTCAGTGCC GGTCCACCTTGA