Protein ID | AgabiH97|044160 |
Gene name | |
Location | scaffold_2:1410234..1411403 |
Strand | - |
Gene length (bp) | 1169 |
Transcript length (bp) | 945 |
Coding sequence length (bp) | 945 |
Protein length (aa) | 315 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF02089 | Palm_thioest | Palmitoyl protein thioesterase | 3.8E-91 | 25 | 295 |
Swissprot ID | Swissprot Description | Start | End | E-value |
---|---|---|---|---|
sp|Q20390|PPT1_CAEEL | Palmitoyl-protein thioesterase 1 OS=Caenorhabditis elegans GN=ppt-1 PE=2 SV=2 | 25 | 298 | 3.0E-56 |
sp|Q8HXW6|PPT1_MACFA | Palmitoyl-protein thioesterase 1 OS=Macaca fascicularis GN=PPT1 PE=2 SV=1 | 21 | 302 | 3.0E-56 |
sp|P50897|PPT1_HUMAN | Palmitoyl-protein thioesterase 1 OS=Homo sapiens GN=PPT1 PE=1 SV=1 | 21 | 302 | 4.0E-56 |
sp|O88531|PPT1_MOUSE | Palmitoyl-protein thioesterase 1 OS=Mus musculus GN=Ppt1 PE=1 SV=2 | 21 | 302 | 3.0E-55 |
sp|P45478|PPT1_BOVIN | Palmitoyl-protein thioesterase 1 OS=Bos taurus GN=PPT1 PE=1 SV=1 | 21 | 302 | 3.0E-54 |
Swissprot ID | Swissprot Description | Start | End | E-value |
---|---|---|---|---|
sp|Q20390|PPT1_CAEEL | Palmitoyl-protein thioesterase 1 OS=Caenorhabditis elegans GN=ppt-1 PE=2 SV=2 | 25 | 298 | 3.0E-56 |
sp|Q8HXW6|PPT1_MACFA | Palmitoyl-protein thioesterase 1 OS=Macaca fascicularis GN=PPT1 PE=2 SV=1 | 21 | 302 | 3.0E-56 |
sp|P50897|PPT1_HUMAN | Palmitoyl-protein thioesterase 1 OS=Homo sapiens GN=PPT1 PE=1 SV=1 | 21 | 302 | 4.0E-56 |
sp|O88531|PPT1_MOUSE | Palmitoyl-protein thioesterase 1 OS=Mus musculus GN=Ppt1 PE=1 SV=2 | 21 | 302 | 3.0E-55 |
sp|P45478|PPT1_BOVIN | Palmitoyl-protein thioesterase 1 OS=Bos taurus GN=PPT1 PE=1 SV=1 | 21 | 302 | 3.0E-54 |
sp|P45479|PPT1_RAT | Palmitoyl-protein thioesterase 1 OS=Rattus norvegicus GN=Ppt1 PE=1 SV=1 | 21 | 302 | 3.0E-53 |
sp|Q9W3C7|PPT1_DROME | Palmitoyl-protein thioesterase 1 OS=Drosophila melanogaster GN=Ppt1 PE=1 SV=2 | 17 | 302 | 6.0E-47 |
sp|O59747|PDF1_SCHPO | Palmitoyl-protein thioesterase-dolichyl pyrophosphate phosphatase fusion 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=pdf1 PE=1 SV=2 | 12 | 309 | 4.0E-41 |
sp|Q54CM0|PPT3_DICDI | Palmitoyl-protein thioesterase 3 OS=Dictyostelium discoideum GN=ppt3 PE=3 SV=1 | 20 | 297 | 7.0E-33 |
sp|O70489|PPT2_RAT | Lysosomal thioesterase PPT2 OS=Rattus norvegicus GN=Ppt2 PE=2 SV=1 | 22 | 293 | 2.0E-21 |
sp|O35448|PPT2_MOUSE | Lysosomal thioesterase PPT2 OS=Mus musculus GN=Ppt2 PE=1 SV=1 | 22 | 293 | 2.0E-21 |
sp|Q9UMR5|PPT2_HUMAN | Lysosomal thioesterase PPT2 OS=Homo sapiens GN=PPT2 PE=1 SV=4 | 22 | 293 | 1.0E-20 |
sp|Q1JQA0|PPT2_BOVIN | Lysosomal thioesterase PPT2 OS=Bos taurus GN=PPT2 PE=2 SV=1 | 24 | 293 | 9.0E-20 |
sp|Q9VKH6|PPT2_DROME | Lysosomal thioesterase PPT2 homolog OS=Drosophila melanogaster GN=Ppt2 PE=2 SV=1 | 24 | 287 | 1.0E-19 |
sp|Q6GNY7|PPT2B_XENLA | Lysosomal thioesterase PPT2-B OS=Xenopus laevis GN=ppt2-b PE=2 SV=1 | 22 | 293 | 2.0E-19 |
sp|Q6PCJ9|PPT2A_XENLA | Lysosomal thioesterase PPT2-A OS=Xenopus laevis GN=ppt2-a PE=2 SV=1 | 24 | 287 | 5.0E-16 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
Yes | 1 - 18 | 0.45 |
Expression values
Label | Description | Expression (RPKM) | Confidence interval (low) | Confidence interval (high) |
---|---|---|---|---|
Casing | Casing mycelium | 78.38 | 44.91 | 111.86 |
Initials | Initials knots | 52.55 | 30.22 | 74.89 |
Pileal_Stipeal_center | Stage I stipe center | 114.86 | 69.07 | 160.64 |
Pileal_Stipeal_shell | Stage I stipe shell | 135.34 | 81.22 | 189.47 |
DIF_stipe_center | Stage II stipe center | 104.47 | 62.60 | 146.34 |
DIF_stipe_shell | Stage II stipe shell | 85.41 | 50.89 | 119.93 |
DIF_stipe_skin | Stage II stipe skin | 98.53 | 58.74 | 138.32 |
DIF_cap_skin | Stage II cap skin | 131.22 | 78.70 | 183.74 |
DIF_cap_tissue | Stage II cap tissue | 120.47 | 72.43 | 168.52 |
DIF_gill_tissue | Stage II gill tissue | 128.50 | 77.32 | 179.68 |
YFB_stipe_center | Young fruiting body stipe center | 87.12 | 50.83 | 123.41 |
YFB_stipe_shell | Young fruiting body stipe shell | 69.53 | 40.60 | 98.46 |
YFB_stipe_skin | Young fruiting body stipe skin | 96.87 | 57.40 | 136.35 |
YFB_cap_skin | Young fruiting body cap skin | 142.31 | 85.51 | 199.11 |
YFB_cap_tissue | Young fruiting body cap tissue | 117.19 | 70.45 | 163.93 |
YFB_gill_tissue | Young fruiting body gill tissue | 145.97 | 87.63 | 204.31 |
YFB_veil | Young fruiting body veil | 137.73 | 82.77 | 192.69 |
Differential expression
Label1 | Label2 | Q-value | Significant difference |
---|---|---|---|
Casing | DIF_gill_tissue | 0.074661 | no |
Casing | YFB_stipe_center | 0.826218 | no |
Casing | YFB_stipe_shell | 0.798913 | no |
Casing | YFB_stipe_skin | 0.579797 | no |
Casing | YFB_cap_skin | 0.026955 | yes |
Casing | YFB_cap_tissue | 0.173347 | no |
Casing | YFB_gill_tissue | 0.019715 | yes |
Casing | YFB_veil | 0.036911 | yes |
Casing | Initials | 0.198914 | no |
Casing | Pileal_Stipeal_center | 0.209256 | no |
Casing | Pileal_Stipeal_shell | 0.047373 | yes |
Casing | DIF_stipe_center | 0.395957 | no |
Casing | DIF_stipe_shell | 0.864259 | no |
Casing | DIF_stipe_skin | 0.536081 | no |
Casing | DIF_cap_skin | 0.061086 | no |
Casing | DIF_cap_tissue | 0.134719 | no |
DIF_gill_tissue | YFB_stipe_center | 0.178830 | no |
DIF_gill_tissue | YFB_stipe_shell | 0.018896 | yes |
DIF_gill_tissue | YFB_stipe_skin | 0.389945 | no |
DIF_gill_tissue | YFB_cap_skin | 0.818786 | no |
DIF_gill_tissue | YFB_cap_tissue | 0.843341 | no |
DIF_gill_tissue | YFB_gill_tissue | 0.764295 | no |
DIF_gill_tissue | YFB_veil | 0.887638 | no |
YFB_stipe_center | YFB_stipe_shell | 0.545316 | no |
YFB_stipe_center | YFB_stipe_skin | 0.820582 | no |
YFB_stipe_center | YFB_cap_skin | 0.075908 | no |
YFB_stipe_center | YFB_cap_tissue | 0.358230 | no |
YFB_stipe_center | YFB_gill_tissue | 0.056367 | no |
YFB_stipe_center | YFB_veil | 0.099595 | no |
YFB_stipe_shell | YFB_stipe_skin | 0.296112 | no |
YFB_stipe_shell | YFB_cap_skin | 0.006387 | yes |
YFB_stipe_shell | YFB_cap_tissue | 0.056367 | no |
YFB_stipe_shell | YFB_gill_tissue | 0.004548 | yes |
YFB_stipe_shell | YFB_veil | 0.007782 | yes |
YFB_stipe_skin | YFB_cap_skin | 0.189762 | no |
YFB_stipe_skin | YFB_cap_tissue | 0.613438 | no |
YFB_stipe_skin | YFB_gill_tissue | 0.151656 | no |
YFB_stipe_skin | YFB_veil | 0.243731 | no |
YFB_cap_skin | YFB_cap_tissue | 0.598176 | no |
YFB_cap_skin | YFB_gill_tissue | 0.963335 | no |
YFB_cap_skin | YFB_veil | 0.953385 | no |
YFB_cap_tissue | YFB_gill_tissue | 0.528753 | no |
YFB_cap_tissue | YFB_veil | 0.682837 | no |
YFB_gill_tissue | YFB_veil | 0.909219 | no |
Initials | DIF_gill_tissue | 0.000613 | yes |
Initials | YFB_stipe_center | 0.074130 | no |
Initials | YFB_stipe_shell | 0.423692 | no |
Initials | YFB_stipe_skin | 0.026955 | yes |
Initials | YFB_cap_skin | 0.000613 | yes |
Initials | YFB_cap_tissue | 0.001140 | yes |
Initials | YFB_gill_tissue | 0.000613 | yes |
Initials | YFB_veil | 0.000613 | yes |
Initials | Pileal_Stipeal_center | 0.003365 | yes |
Initials | Pileal_Stipeal_shell | 0.000613 | yes |
Initials | DIF_stipe_center | 0.009446 | yes |
Initials | DIF_stipe_shell | 0.090151 | no |
Initials | DIF_stipe_skin | 0.021056 | yes |
Initials | DIF_cap_skin | 0.000613 | yes |
Initials | DIF_cap_tissue | 0.000613 | yes |
Pileal_Stipeal_center | DIF_gill_tissue | 0.801376 | no |
Pileal_Stipeal_center | YFB_stipe_center | 0.407453 | no |
Pileal_Stipeal_center | YFB_stipe_shell | 0.070681 | no |
Pileal_Stipeal_center | YFB_stipe_skin | 0.669500 | no |
Pileal_Stipeal_center | YFB_cap_skin | 0.543543 | no |
Pileal_Stipeal_center | YFB_cap_tissue | 0.970338 | no |
Pileal_Stipeal_center | YFB_gill_tissue | 0.483189 | no |
Pileal_Stipeal_center | YFB_veil | 0.634752 | no |
Pileal_Stipeal_center | Pileal_Stipeal_shell | 0.678648 | no |
Pileal_Stipeal_center | DIF_stipe_center | 0.839133 | no |
Pileal_Stipeal_center | DIF_stipe_shell | 0.364099 | no |
Pileal_Stipeal_center | DIF_stipe_skin | 0.709908 | no |
Pileal_Stipeal_center | DIF_cap_skin | 0.752354 | no |
Pileal_Stipeal_center | DIF_cap_tissue | 0.925128 | no |
Pileal_Stipeal_shell | DIF_gill_tissue | 0.918132 | no |
Pileal_Stipeal_shell | YFB_stipe_center | 0.114271 | no |
Pileal_Stipeal_shell | YFB_stipe_shell | 0.009123 | yes |
Pileal_Stipeal_shell | YFB_stipe_skin | 0.272730 | no |
Pileal_Stipeal_shell | YFB_cap_skin | 0.919747 | no |
Pileal_Stipeal_shell | YFB_cap_tissue | 0.719318 | no |
Pileal_Stipeal_shell | YFB_gill_tissue | 0.873595 | no |
Pileal_Stipeal_shell | YFB_veil | 0.973755 | no |
Pileal_Stipeal_shell | DIF_stipe_center | 0.431613 | no |
Pileal_Stipeal_shell | DIF_stipe_shell | 0.095478 | no |
Pileal_Stipeal_shell | DIF_stipe_skin | 0.303820 | no |
Pileal_Stipeal_shell | DIF_cap_skin | 0.953149 | no |
Pileal_Stipeal_shell | DIF_cap_tissue | 0.786022 | no |
DIF_stipe_center | DIF_gill_tissue | 0.563359 | no |
DIF_stipe_center | YFB_stipe_center | 0.637149 | no |
DIF_stipe_center | YFB_stipe_shell | 0.158228 | no |
DIF_stipe_center | YFB_stipe_skin | 0.876519 | no |
DIF_stipe_center | YFB_cap_skin | 0.314071 | no |
DIF_stipe_center | YFB_cap_tissue | 0.791067 | no |
DIF_stipe_center | YFB_gill_tissue | 0.263495 | no |
DIF_stipe_center | YFB_veil | 0.390800 | no |
DIF_stipe_center | DIF_stipe_shell | 0.584067 | no |
DIF_stipe_center | DIF_stipe_skin | 0.908752 | no |
DIF_stipe_center | DIF_cap_skin | 0.506011 | no |
DIF_stipe_center | DIF_cap_tissue | 0.724325 | no |
DIF_stipe_shell | DIF_gill_tissue | 0.150982 | no |
DIF_stipe_shell | YFB_stipe_center | 0.972063 | no |
DIF_stipe_shell | YFB_stipe_shell | 0.587937 | no |
DIF_stipe_shell | YFB_stipe_skin | 0.776570 | no |
DIF_stipe_shell | YFB_cap_skin | 0.062610 | no |
DIF_stipe_shell | YFB_cap_tissue | 0.309546 | no |
DIF_stipe_shell | YFB_gill_tissue | 0.044418 | yes |
DIF_stipe_shell | YFB_veil | 0.078944 | no |
DIF_stipe_shell | DIF_stipe_skin | 0.738696 | no |
DIF_stipe_shell | DIF_cap_skin | 0.130962 | no |
DIF_stipe_shell | DIF_cap_tissue | 0.253793 | no |
DIF_stipe_skin | DIF_gill_tissue | 0.430826 | no |
DIF_stipe_skin | YFB_stipe_center | 0.786231 | no |
DIF_stipe_skin | YFB_stipe_shell | 0.265944 | no |
DIF_stipe_skin | YFB_stipe_skin | 0.975724 | no |
DIF_stipe_skin | YFB_cap_skin | 0.220561 | no |
DIF_stipe_skin | YFB_cap_tissue | 0.660009 | no |
DIF_stipe_skin | YFB_gill_tissue | 0.178069 | no |
DIF_stipe_skin | YFB_veil | 0.275250 | no |
DIF_stipe_skin | DIF_cap_skin | 0.377104 | no |
DIF_stipe_skin | DIF_cap_tissue | 0.589729 | no |
DIF_cap_skin | DIF_gill_tissue | 0.969852 | no |
DIF_cap_skin | YFB_stipe_center | 0.150574 | no |
DIF_cap_skin | YFB_stipe_shell | 0.013186 | yes |
DIF_cap_skin | YFB_stipe_skin | 0.342385 | no |
DIF_cap_skin | YFB_cap_skin | 0.864100 | no |
DIF_cap_skin | YFB_cap_tissue | 0.797807 | no |
DIF_cap_skin | YFB_gill_tissue | 0.810780 | no |
DIF_cap_skin | YFB_veil | 0.926903 | no |
DIF_cap_skin | DIF_cap_tissue | 0.855080 | no |
DIF_cap_tissue | DIF_gill_tissue | 0.894972 | no |
DIF_cap_tissue | YFB_stipe_center | 0.293279 | no |
DIF_cap_tissue | YFB_stipe_shell | 0.040947 | yes |
DIF_cap_tissue | YFB_stipe_skin | 0.538578 | no |
DIF_cap_tissue | YFB_cap_skin | 0.660130 | no |
DIF_cap_tissue | YFB_cap_tissue | 0.957628 | no |
DIF_cap_tissue | YFB_gill_tissue | 0.597762 | no |
DIF_cap_tissue | YFB_veil | 0.749213 | no |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >AgabiH97|044160 MSLWFILLGFAVHLALASTIPSPRPLVLWHGLGDSHSSPGMLEFMNLIKEIHPGIFVHSIFISEDLNEDKKAGFY GNVLEQLEFVADQLAAIPELEAGFDAVGLSQGGQFLRAYVECYNNPPVNNLITFGSQHMGISDIPICRPFDFLCQ IARKAAKRAVYSTWAQENLIQAQYYRDPNNYASYLHANHFLPYVNNEIEEARNQTYARNFASLSNLVLVMFTEDK LVVPKESSWFGYEELRDSVVSDASDQQRFLAMDKKIIPMREQPLYIEDWIGLRELDERGAVVFSECVGEHMEMGD CWEELIVEYTGGSL* |
Coding | >AgabiH97|044160 ATGTCACTCTGGTTCATCCTCCTCGGTTTCGCTGTTCACCTTGCGTTGGCATCTACCATCCCGTCTCCACGGCCA CTTGTTCTCTGGCATGGTTTGGGGGATTCGCATTCCTCACCCGGAATGCTTGAATTTATGAACCTCATCAAGGAG ATACACCCCGGAATCTTCGTCCATTCCATATTTATTTCGGAAGACCTGAATGAAGACAAGAAAGCTGGTTTCTAC GGAAACGTTCTTGAGCAGCTGGAATTTGTGGCAGATCAGCTCGCCGCCATACCAGAACTGGAAGCTGGATTCGAC GCGGTGGGCCTCTCGCAAGGTGGTCAATTCTTGCGAGCATATGTCGAATGTTACAATAATCCACCCGTCAATAAC CTCATCACGTTTGGCTCTCAACACATGGGTATCTCTGATATACCAATATGCAGACCGTTCGATTTTCTATGTCAG ATTGCTCGAAAGGCAGCCAAGAGAGCGGTTTATAGTACCTGGGCTCAAGAAAATCTGATTCAGGCCCAGTATTAT CGTGATCCAAATAATTATGCATCATATCTCCACGCGAACCACTTCCTTCCATACGTCAACAATGAAATCGAGGAA GCGCGCAATCAGACTTATGCACGCAACTTTGCTTCCCTGAGTAACCTCGTGCTGGTCATGTTTACAGAAGACAAG TTGGTGGTGCCAAAAGAGAGCTCCTGGTTCGGATATGAAGAATTGAGAGACAGCGTTGTGTCCGACGCGTCGGAT CAGCAGCGCTTCTTAGCAATGGACAAGAAGATCATTCCGATGAGGGAACAACCGCTGTATATTGAAGATTGGATA GGATTGCGGGAGCTGGATGAGCGCGGGGCGGTTGTTTTTTCCGAGTGCGTTGGCGAGCACATGGAGATGGGAGAC TGCTGGGAAGAGCTGATTGTCGAGTACACGGGAGGGAGTCTGTAG |
Transcript | >AgabiH97|044160 ATGTCACTCTGGTTCATCCTCCTCGGTTTCGCTGTTCACCTTGCGTTGGCATCTACCATCCCGTCTCCACGGCCA CTTGTTCTCTGGCATGGTTTGGGGGATTCGCATTCCTCACCCGGAATGCTTGAATTTATGAACCTCATCAAGGAG ATACACCCCGGAATCTTCGTCCATTCCATATTTATTTCGGAAGACCTGAATGAAGACAAGAAAGCTGGTTTCTAC GGAAACGTTCTTGAGCAGCTGGAATTTGTGGCAGATCAGCTCGCCGCCATACCAGAACTGGAAGCTGGATTCGAC GCGGTGGGCCTCTCGCAAGGTGGTCAATTCTTGCGAGCATATGTCGAATGTTACAATAATCCACCCGTCAATAAC CTCATCACGTTTGGCTCTCAACACATGGGTATCTCTGATATACCAATATGCAGACCGTTCGATTTTCTATGTCAG ATTGCTCGAAAGGCAGCCAAGAGAGCGGTTTATAGTACCTGGGCTCAAGAAAATCTGATTCAGGCCCAGTATTAT CGTGATCCAAATAATTATGCATCATATCTCCACGCGAACCACTTCCTTCCATACGTCAACAATGAAATCGAGGAA GCGCGCAATCAGACTTATGCACGCAACTTTGCTTCCCTGAGTAACCTCGTGCTGGTCATGTTTACAGAAGACAAG TTGGTGGTGCCAAAAGAGAGCTCCTGGTTCGGATATGAAGAATTGAGAGACAGCGTTGTGTCCGACGCGTCGGAT CAGCAGCGCTTCTTAGCAATGGACAAGAAGATCATTCCGATGAGGGAACAACCGCTGTATATTGAAGATTGGATA GGATTGCGGGAGCTGGATGAGCGCGGGGCGGTTGTTTTTTCCGAGTGCGTTGGCGAGCACATGGAGATGGGAGAC TGCTGGGAAGAGCTGATTGTCGAGTACACGGGAGGGAGTCTGTAG |
Gene | >AgabiH97|044160 ATGTCACTCTGGTTCATCCTCCTCGGTTTCGCTGTTCACCTTGCGTTGGCATCTACCATCCCGTCTCCACGGCCA CTTGTTCTCTGGCATGGTTTGGGTAGGAATGAGTCCTTGGGAATACAGAGTAGCATTTGCCCTTAGCTAATTTCC TCGCGCAGGGGATTCGCATTCCTCACCCGGAATGCTTGAATTTATGAACCTCATCAAGGAGATACACCCCGGAAT CTTCGTCCATTCCATATTTATTTCGGAAGACCTGAATGAAGACAAGAAAGCTGGTTTCGTATGACAGCCGCGTCT TTCAAAGTTATTCTACTGATTATCGAGAAATGGGTGCATGTAGTACGGAAACGTTCTTGAGCAGCTGGAATTTGT GGCAGATCAGCTCGCCGCCATACCAGAACTGGAAGCTGGATTCGACGCGGTGGGCCTCTCGCAAGGTTTGTCCAG CTACTCTATGTGTACTGTTAAGCTAGTATTGAAACAAAGAAGGTGGTCAATTCTTGCGAGCATATGTCGAATGTT ACAATAATCCACCCGTCAATAACCTCATCACGTTTGGCTCTCAACACATGGGTATCTCTGATATACCAATATGCA GACCGTTCGATTTTCTATGTCAGATTGCTCGAAAGGCAGCCAAGAGAGCGGTTTATAGTACCTGGGCTCAAGAAA ATCTGATTCAGGTGAGCGTTGGCGTTGGTGACCTGAAGATGATTAATTCTTATGTCCTATAGGCCCAGTATTATC GTGATCCAAATAATTATGCATCATATCTCCACGCGAACCACTTCCTTCCATACGTCAACAATGAAATCGAGGAAG CGCGCAATCAGACTTATGCACGCAACTTTGCTTCCCTGAGTAACCTCGTGCTGGTCATGTTTACAGAAGACAAGT TGGTGGTGCCAAAAGAGAGCTCCTGGTTCGGATATGAAGAATTGAGAGACAGCGTTGTGTCCGACGCGTCGGATC AGCAGCGCTTCTTAGCAATGGACAAGAAGATCATTCCGATGAGGGAACAACCGCTGTATATTGAAGATTGGATAG GATTGCGGGAGCTGGATGAGCGCGGGGCGGTTGTTTTTTCCGAGTGCGTTGGCGAGCACATGGAGATGGGAGACT GCTGGGAAGAGCTGATTGTCGAGTACACGGGAGGGAGTCTGTAG |