© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | AgabiH97|042550 |
| Gene name | |
| Location | scaffold_2:1016842..1018678 |
| Strand | + |
| Gene length (bp) | 1836 |
| Transcript length (bp) | 1608 |
| Coding sequence length (bp) | 1608 |
| Protein length (aa) | 536 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF01853 | MOZ_SAS | MOZ/SAS family | 2.3E-81 | 312 | 490 |
| PF17772 | zf-MYST | MYST family zinc finger domain | 3.0E-20 | 253 | 307 |
| PF11717 | Tudor-knot | RNA binding activity-knot of a chromodomain | 7.4E-18 | 28 | 103 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|P0CP03|ESA1_CRYNB | Histone acetyltransferase ESA1 OS=Cryptococcus neoformans var. neoformans serotype D (strain B-3501A) GN=ESA1 PE=3 SV=1 | 11 | 535 | 0.0E+00 |
| sp|Q4P3S3|ESA1_USTMA | Histone acetyltransferase ESA1 OS=Ustilago maydis (strain 521 / FGSC 9021) GN=ESA1 PE=3 SV=1 | 14 | 535 | 0.0E+00 |
| sp|P0CP02|ESA1_CRYNJ | Histone acetyltransferase ESA1 OS=Cryptococcus neoformans var. neoformans serotype D (strain JEC21 / ATCC MYA-565) GN=ESA1 PE=3 SV=1 | 11 | 535 | 0.0E+00 |
| sp|C8VBH4|ESA1_EMENI | Histone acetyltransferase esa1 OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=esa1 PE=3 SV=1 | 13 | 535 | 5.0E-155 |
| sp|Q2UMQ5|ESA1_ASPOR | Histone acetyltransferase ESA1 OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) GN=esa1 PE=3 SV=1 | 13 | 535 | 2.0E-154 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|P0CP03|ESA1_CRYNB | Histone acetyltransferase ESA1 OS=Cryptococcus neoformans var. neoformans serotype D (strain B-3501A) GN=ESA1 PE=3 SV=1 | 11 | 535 | 0.0E+00 |
| sp|Q4P3S3|ESA1_USTMA | Histone acetyltransferase ESA1 OS=Ustilago maydis (strain 521 / FGSC 9021) GN=ESA1 PE=3 SV=1 | 14 | 535 | 0.0E+00 |
| sp|P0CP02|ESA1_CRYNJ | Histone acetyltransferase ESA1 OS=Cryptococcus neoformans var. neoformans serotype D (strain JEC21 / ATCC MYA-565) GN=ESA1 PE=3 SV=1 | 11 | 535 | 0.0E+00 |
| sp|C8VBH4|ESA1_EMENI | Histone acetyltransferase esa1 OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=esa1 PE=3 SV=1 | 13 | 535 | 5.0E-155 |
| sp|Q2UMQ5|ESA1_ASPOR | Histone acetyltransferase ESA1 OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) GN=esa1 PE=3 SV=1 | 13 | 535 | 2.0E-154 |
| sp|O94446|ESA1_SCHPO | Histone acetyltransferase mst1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=mst1 PE=1 SV=1 | 73 | 535 | 5.0E-152 |
| sp|Q4WHG1|ESA1_ASPFU | Histone acetyltransferase esa1 OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=esa1 PE=3 SV=1 | 44 | 535 | 7.0E-148 |
| sp|Q7S9B6|ESA1_NEUCR | Histone acetyltransferase esa-1 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=esa-1 PE=3 SV=1 | 20 | 535 | 8.0E-146 |
| sp|Q08649|ESA1_YEAST | Histone acetyltransferase ESA1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ESA1 PE=1 SV=1 | 10 | 535 | 5.0E-145 |
| sp|Q6CKE9|ESA1_KLULA | Histone acetyltransferase ESA1 OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=ESA1 PE=3 SV=1 | 23 | 535 | 1.0E-144 |
| sp|Q6C710|ESA1_YARLI | Histone acetyltransferase ESA1 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=ESA1 PE=3 SV=1 | 210 | 535 | 3.0E-142 |
| sp|Q4IEV4|ESA1_GIBZE | Histone acetyltransferase ESA1 OS=Gibberella zeae (strain PH-1 / ATCC MYA-4620 / FGSC 9075 / NRRL 31084) GN=ESA1 PE=3 SV=1 | 25 | 535 | 1.0E-139 |
| sp|Q6FPH9|ESA1_CANGA | Histone acetyltransferase ESA1 OS=Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=ESA1 PE=3 SV=1 | 23 | 535 | 2.0E-136 |
| sp|Q75BY2|ESA1_ASHGO | Histone acetyltransferase ESA1 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=ESA1 PE=3 SV=2 | 228 | 535 | 6.0E-136 |
| sp|Q6BU95|ESA1_DEBHA | Histone acetyltransferase ESA1 OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968) GN=ESA1 PE=3 SV=2 | 27 | 535 | 4.0E-131 |
| sp|Q5A7Q2|ESA1_CANAL | Histone acetyltransferase ESA1 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=ESA1 PE=3 SV=1 | 30 | 535 | 9.0E-126 |
| sp|Q5RBG4|KAT5_PONAB | Histone acetyltransferase KAT5 OS=Pongo abelii GN=KAT5 PE=2 SV=1 | 30 | 523 | 2.0E-118 |
| sp|Q960X4|TIP60_DROME | Histone acetyltransferase Tip60 OS=Drosophila melanogaster GN=Tip60 PE=1 SV=1 | 23 | 523 | 3.0E-117 |
| sp|Q92993|KAT5_HUMAN | Histone acetyltransferase KAT5 OS=Homo sapiens GN=KAT5 PE=1 SV=2 | 30 | 523 | 5.0E-117 |
| sp|Q8CHK4|KAT5_MOUSE | Histone acetyltransferase KAT5 OS=Mus musculus GN=Kat5 PE=1 SV=2 | 30 | 523 | 5.0E-117 |
| sp|Q99MK2|KAT5_RAT | Histone acetyltransferase KAT5 OS=Rattus norvegicus GN=Kat5 PE=1 SV=2 | 30 | 523 | 5.0E-117 |
| sp|Q810T5|KAT7_RAT | Histone acetyltransferase KAT7 OS=Rattus norvegicus GN=Kat7 PE=1 SV=1 | 221 | 527 | 1.0E-99 |
| sp|Q5SVQ0|KAT7_MOUSE | Histone acetyltransferase KAT7 OS=Mus musculus GN=Kat7 PE=1 SV=1 | 221 | 527 | 1.0E-99 |
| sp|O95251|KAT7_HUMAN | Histone acetyltransferase KAT7 OS=Homo sapiens GN=KAT7 PE=1 SV=1 | 221 | 527 | 2.0E-99 |
| sp|Q9TYU5|TIP60_CAEEL | Histone acetyltransferase Tip60 homolog OS=Caenorhabditis elegans GN=mys-1 PE=2 SV=1 | 237 | 533 | 6.0E-99 |
| sp|Q8LI34|MYST1_ORYSJ | Putative MYST-like histone acetyltransferase 1 OS=Oryza sativa subsp. japonica GN=Os07g0626600 PE=3 SV=1 | 163 | 523 | 4.0E-98 |
| sp|Q9LXD7|MYST2_ARATH | Histone acetyltransferase of the MYST family 2 OS=Arabidopsis thaliana GN=HAM2 PE=1 SV=1 | 249 | 523 | 6.0E-98 |
| sp|Q9FLF7|MYST1_ARATH | Histone acetyltransferase of the MYST family 1 OS=Arabidopsis thaliana GN=HAM1 PE=1 SV=1 | 249 | 523 | 2.0E-97 |
| sp|Q9H7Z6|KAT8_HUMAN | Histone acetyltransferase KAT8 OS=Homo sapiens GN=KAT8 PE=1 SV=2 | 239 | 524 | 7.0E-97 |
| sp|Q9D1P2|KAT8_MOUSE | Histone acetyltransferase KAT8 OS=Mus musculus GN=Kat8 PE=1 SV=1 | 239 | 524 | 1.0E-96 |
| sp|Q5XI06|KAT8_RAT | Histone acetyltransferase KAT8 OS=Rattus norvegicus GN=Kat8 PE=1 SV=1 | 239 | 524 | 1.0E-96 |
| sp|O02193|MOF_DROME | Males-absent on the first protein OS=Drosophila melanogaster GN=mof PE=1 SV=1 | 239 | 523 | 5.0E-90 |
| sp|Q8WYB5|KAT6B_HUMAN | Histone acetyltransferase KAT6B OS=Homo sapiens GN=KAT6B PE=1 SV=3 | 259 | 527 | 4.0E-81 |
| sp|Q8BRB7|KAT6B_MOUSE | Histone acetyltransferase KAT6B OS=Mus musculus GN=Kat6b PE=1 SV=3 | 259 | 527 | 4.0E-81 |
| sp|Q8WML3|KAT6B_MACFA | Histone acetyltransferase KAT6B OS=Macaca fascicularis GN=KAT6B PE=2 SV=1 | 259 | 527 | 7.0E-81 |
| sp|Q10325|MST2_SCHPO | Histone acetyltransferase mst2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=mst2 PE=1 SV=1 | 255 | 523 | 1.0E-80 |
| sp|Q92794|KAT6A_HUMAN | Histone acetyltransferase KAT6A OS=Homo sapiens GN=KAT6A PE=1 SV=2 | 259 | 527 | 2.0E-80 |
| sp|Q8BZ21|KAT6A_MOUSE | Histone acetyltransferase KAT6A OS=Mus musculus GN=Kat6a PE=1 SV=2 | 259 | 527 | 3.0E-80 |
| sp|Q5TKR9|KAT6A_RAT | Histone acetyltransferase KAT6A OS=Rattus norvegicus GN=Kat6a PE=1 SV=2 | 259 | 527 | 4.0E-80 |
| sp|P34218|SAS3_YEAST | Histone acetyltransferase SAS3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SAS3 PE=1 SV=1 | 249 | 526 | 1.0E-67 |
| sp|P40963|SAS2_YEAST | Histone acetyltransferase SAS2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SAS2 PE=1 SV=1 | 281 | 477 | 4.0E-29 |
| sp|Q75BY2|ESA1_ASHGO | Histone acetyltransferase ESA1 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=ESA1 PE=3 SV=2 | 18 | 114 | 4.0E-09 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0016573 | histone acetylation | Yes |
| GO:0006355 | regulation of transcription, DNA-templated | Yes |
| GO:0004402 | histone acetyltransferase activity | Yes |
| GO:0016410 | N-acyltransferase activity | No |
| GO:0006473 | protein acetylation | No |
| GO:0061733 | peptide-lysine-N-acetyltransferase activity | No |
| GO:0016746 | acyltransferase activity | No |
| GO:2001141 | regulation of RNA biosynthetic process | No |
| GO:0043412 | macromolecule modification | No |
| GO:0008152 | metabolic process | No |
| GO:0016747 | acyltransferase activity, transferring groups other than amino-acyl groups | No |
| GO:0019222 | regulation of metabolic process | No |
| GO:0019538 | protein metabolic process | No |
| GO:0018193 | peptidyl-amino acid modification | No |
| GO:0008150 | biological_process | No |
| GO:0071704 | organic substance metabolic process | No |
| GO:0018205 | peptidyl-lysine modification | No |
| GO:0031326 | regulation of cellular biosynthetic process | No |
| GO:0009889 | regulation of biosynthetic process | No |
| GO:1901564 | organonitrogen compound metabolic process | No |
| GO:0016570 | histone modification | No |
| GO:0006475 | internal protein amino acid acetylation | No |
| GO:0065007 | biological regulation | No |
| GO:0080090 | regulation of primary metabolic process | No |
| GO:0051171 | regulation of nitrogen compound metabolic process | No |
| GO:0019219 | regulation of nucleobase-containing compound metabolic process | No |
| GO:0140096 | catalytic activity, acting on a protein | No |
| GO:0016407 | acetyltransferase activity | No |
| GO:0003824 | catalytic activity | No |
| GO:0060255 | regulation of macromolecule metabolic process | No |
| GO:0050789 | regulation of biological process | No |
| GO:1903506 | regulation of nucleic acid-templated transcription | No |
| GO:0043543 | protein acylation | No |
| GO:0044238 | primary metabolic process | No |
| GO:0010468 | regulation of gene expression | No |
| GO:0018394 | peptidyl-lysine acetylation | No |
| GO:0034212 | peptide N-acetyltransferase activity | No |
| GO:0018393 | internal peptidyl-lysine acetylation | No |
| GO:0003674 | molecular_function | No |
| GO:0036211 | protein modification process | No |
| GO:0016740 | transferase activity | No |
| GO:0031323 | regulation of cellular metabolic process | No |
| GO:0008080 | N-acetyltransferase activity | No |
| GO:0010556 | regulation of macromolecule biosynthetic process | No |
| GO:0050794 | regulation of cellular process | No |
| GO:0006807 | nitrogen compound metabolic process | No |
| GO:0051252 | regulation of RNA metabolic process | No |
| GO:0043170 | macromolecule metabolic process | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 19 | 0.45 |
Expression values
| Label | Description | Expression (RPKM) | Confidence interval (low) | Confidence interval (high) |
|---|---|---|---|---|
| Casing | Casing mycelium | 35.95 | 20.94 | 50.96 |
| Initials | Initials knots | 39.05 | 23.14 | 54.96 |
| Pileal_Stipeal_center | Stage I stipe center | 42.77 | 25.49 | 60.05 |
| Pileal_Stipeal_shell | Stage I stipe shell | 62.36 | 37.56 | 87.15 |
| DIF_stipe_center | Stage II stipe center | 47.37 | 28.36 | 66.39 |
| DIF_stipe_shell | Stage II stipe shell | 40.90 | 24.32 | 57.48 |
| DIF_stipe_skin | Stage II stipe skin | 42.95 | 25.55 | 60.34 |
| DIF_cap_skin | Stage II cap skin | 61.37 | 36.96 | 85.79 |
| DIF_cap_tissue | Stage II cap tissue | 65.16 | 39.06 | 91.26 |
| DIF_gill_tissue | Stage II gill tissue | 60.13 | 36.18 | 84.08 |
| YFB_stipe_center | Young fruiting body stipe center | 37.10 | 21.85 | 52.34 |
| YFB_stipe_shell | Young fruiting body stipe shell | 36.13 | 21.31 | 50.96 |
| YFB_stipe_skin | Young fruiting body stipe skin | 38.91 | 23.04 | 54.78 |
| YFB_cap_skin | Young fruiting body cap skin | 44.69 | 26.64 | 62.75 |
| YFB_cap_tissue | Young fruiting body cap tissue | 71.13 | 42.75 | 99.50 |
| YFB_gill_tissue | Young fruiting body gill tissue | 51.90 | 30.83 | 72.96 |
| YFB_veil | Young fruiting body veil | 52.41 | 31.34 | 73.49 |
Differential expression
| Label1 | Label2 | Q-value | Significant difference |
|---|---|---|---|
| Casing | DIF_gill_tissue | 0.054170 | no |
| Casing | YFB_stipe_center | 0.954369 | no |
| Casing | YFB_stipe_shell | 0.992340 | no |
| Casing | YFB_stipe_skin | 0.874132 | no |
| Casing | YFB_cap_skin | 0.561375 | no |
| Casing | YFB_cap_tissue | 0.007782 | yes |
| Casing | YFB_gill_tissue | 0.230438 | no |
| Casing | YFB_veil | 0.203637 | no |
| Casing | Initials | 0.864678 | no |
| Casing | Pileal_Stipeal_center | 0.664741 | no |
| Casing | Pileal_Stipeal_shell | 0.033444 | yes |
| Casing | DIF_stipe_center | 0.406835 | no |
| Casing | DIF_stipe_shell | 0.771042 | no |
| Casing | DIF_stipe_skin | 0.650384 | no |
| Casing | DIF_cap_skin | 0.043339 | yes |
| Casing | DIF_cap_tissue | 0.024698 | yes |
| DIF_gill_tissue | YFB_stipe_center | 0.076444 | no |
| DIF_gill_tissue | YFB_stipe_shell | 0.061844 | no |
| DIF_gill_tissue | YFB_stipe_skin | 0.119156 | no |
| DIF_gill_tissue | YFB_cap_skin | 0.355880 | no |
| DIF_gill_tissue | YFB_cap_tissue | 0.660684 | no |
| DIF_gill_tissue | YFB_gill_tissue | 0.725408 | no |
| DIF_gill_tissue | YFB_veil | 0.740828 | no |
| YFB_stipe_center | YFB_stipe_shell | 0.962244 | no |
| YFB_stipe_center | YFB_stipe_skin | 0.930000 | no |
| YFB_stipe_center | YFB_cap_skin | 0.637194 | no |
| YFB_stipe_center | YFB_cap_tissue | 0.011350 | yes |
| YFB_stipe_center | YFB_gill_tissue | 0.284940 | no |
| YFB_stipe_center | YFB_veil | 0.254850 | no |
| YFB_stipe_shell | YFB_stipe_skin | 0.881432 | no |
| YFB_stipe_shell | YFB_cap_skin | 0.568975 | no |
| YFB_stipe_shell | YFB_cap_tissue | 0.006032 | yes |
| YFB_stipe_shell | YFB_gill_tissue | 0.237882 | no |
| YFB_stipe_shell | YFB_veil | 0.207986 | no |
| YFB_stipe_skin | YFB_cap_skin | 0.748933 | no |
| YFB_stipe_skin | YFB_cap_tissue | 0.021056 | yes |
| YFB_stipe_skin | YFB_gill_tissue | 0.390721 | no |
| YFB_stipe_skin | YFB_veil | 0.350999 | no |
| YFB_cap_skin | YFB_cap_tissue | 0.095644 | no |
| YFB_cap_skin | YFB_gill_tissue | 0.724739 | no |
| YFB_cap_skin | YFB_veil | 0.692029 | no |
| YFB_cap_tissue | YFB_gill_tissue | 0.320737 | no |
| YFB_cap_tissue | YFB_veil | 0.324781 | no |
| YFB_gill_tissue | YFB_veil | 0.985620 | no |
| Initials | DIF_gill_tissue | 0.127784 | no |
| Initials | YFB_stipe_center | 0.923540 | no |
| Initials | YFB_stipe_shell | 0.877498 | no |
| Initials | YFB_stipe_skin | 0.994620 | no |
| Initials | YFB_cap_skin | 0.757787 | no |
| Initials | YFB_cap_tissue | 0.022111 | yes |
| Initials | YFB_gill_tissue | 0.400535 | no |
| Initials | YFB_veil | 0.359520 | no |
| Initials | Pileal_Stipeal_center | 0.852009 | no |
| Initials | Pileal_Stipeal_shell | 0.092165 | no |
| Initials | DIF_stipe_center | 0.605834 | no |
| Initials | DIF_stipe_shell | 0.933438 | no |
| Initials | DIF_stipe_skin | 0.839196 | no |
| Initials | DIF_cap_skin | 0.112109 | no |
| Initials | DIF_cap_tissue | 0.065276 | no |
| Pileal_Stipeal_center | DIF_gill_tissue | 0.259041 | no |
| Pileal_Stipeal_center | YFB_stipe_center | 0.739160 | no |
| Pileal_Stipeal_center | YFB_stipe_shell | 0.674418 | no |
| Pileal_Stipeal_center | YFB_stipe_skin | 0.842728 | no |
| Pileal_Stipeal_center | YFB_cap_skin | 0.936465 | no |
| Pileal_Stipeal_center | YFB_cap_tissue | 0.068081 | no |
| Pileal_Stipeal_center | YFB_gill_tissue | 0.619061 | no |
| Pileal_Stipeal_center | YFB_veil | 0.582266 | no |
| Pileal_Stipeal_center | Pileal_Stipeal_shell | 0.197823 | no |
| Pileal_Stipeal_center | DIF_stipe_center | 0.823840 | no |
| Pileal_Stipeal_center | DIF_stipe_shell | 0.935596 | no |
| Pileal_Stipeal_center | DIF_stipe_skin | 0.992713 | no |
| Pileal_Stipeal_center | DIF_cap_skin | 0.229368 | no |
| Pileal_Stipeal_center | DIF_cap_tissue | 0.151387 | no |
| Pileal_Stipeal_shell | DIF_gill_tissue | 0.944715 | no |
| Pileal_Stipeal_shell | YFB_stipe_center | 0.052135 | no |
| Pileal_Stipeal_shell | YFB_stipe_shell | 0.042260 | yes |
| Pileal_Stipeal_shell | YFB_stipe_skin | 0.086750 | no |
| Pileal_Stipeal_shell | YFB_cap_skin | 0.281547 | no |
| Pileal_Stipeal_shell | YFB_cap_tissue | 0.752207 | no |
| Pileal_Stipeal_shell | YFB_gill_tissue | 0.637336 | no |
| Pileal_Stipeal_shell | YFB_veil | 0.650291 | no |
| Pileal_Stipeal_shell | DIF_stipe_center | 0.399915 | no |
| Pileal_Stipeal_shell | DIF_stipe_shell | 0.133000 | no |
| Pileal_Stipeal_shell | DIF_stipe_skin | 0.203521 | no |
| Pileal_Stipeal_shell | DIF_cap_skin | 0.975341 | no |
| Pileal_Stipeal_shell | DIF_cap_tissue | 0.932526 | no |
| DIF_stipe_center | DIF_gill_tissue | 0.477508 | no |
| DIF_stipe_center | YFB_stipe_center | 0.474821 | no |
| DIF_stipe_center | YFB_stipe_shell | 0.413271 | no |
| DIF_stipe_center | YFB_stipe_skin | 0.596542 | no |
| DIF_stipe_center | YFB_cap_skin | 0.909839 | no |
| DIF_stipe_center | YFB_cap_tissue | 0.150436 | no |
| DIF_stipe_center | YFB_gill_tissue | 0.846828 | no |
| DIF_stipe_center | YFB_veil | 0.821210 | no |
| DIF_stipe_center | DIF_stipe_shell | 0.720059 | no |
| DIF_stipe_center | DIF_stipe_skin | 0.827085 | no |
| DIF_stipe_center | DIF_cap_skin | 0.440852 | no |
| DIF_stipe_center | DIF_cap_tissue | 0.312315 | no |
| DIF_stipe_shell | DIF_gill_tissue | 0.186180 | no |
| DIF_stipe_shell | YFB_stipe_center | 0.833930 | no |
| DIF_stipe_shell | YFB_stipe_shell | 0.779362 | no |
| DIF_stipe_shell | YFB_stipe_skin | 0.924382 | no |
| DIF_stipe_shell | YFB_cap_skin | 0.853404 | no |
| DIF_stipe_shell | YFB_cap_tissue | 0.037593 | yes |
| DIF_stipe_shell | YFB_gill_tissue | 0.508520 | no |
| DIF_stipe_shell | YFB_veil | 0.466993 | no |
| DIF_stipe_shell | DIF_stipe_skin | 0.924452 | no |
| DIF_stipe_shell | DIF_cap_skin | 0.162357 | no |
| DIF_stipe_shell | DIF_cap_tissue | 0.100566 | no |
| DIF_stipe_skin | DIF_gill_tissue | 0.260698 | no |
| DIF_stipe_skin | YFB_stipe_center | 0.722630 | no |
| DIF_stipe_skin | YFB_stipe_shell | 0.660176 | no |
| DIF_stipe_skin | YFB_stipe_skin | 0.831718 | no |
| DIF_stipe_skin | YFB_cap_skin | 0.942747 | no |
| DIF_stipe_skin | YFB_cap_tissue | 0.064705 | no |
| DIF_stipe_skin | YFB_gill_tissue | 0.627081 | no |
| DIF_stipe_skin | YFB_veil | 0.586921 | no |
| DIF_stipe_skin | DIF_cap_skin | 0.230239 | no |
| DIF_stipe_skin | DIF_cap_tissue | 0.148649 | no |
| DIF_cap_skin | DIF_gill_tissue | 0.970686 | no |
| DIF_cap_skin | YFB_stipe_center | 0.064520 | no |
| DIF_cap_skin | YFB_stipe_shell | 0.051723 | no |
| DIF_cap_skin | YFB_stipe_skin | 0.103956 | no |
| DIF_cap_skin | YFB_cap_skin | 0.314436 | no |
| DIF_cap_skin | YFB_cap_tissue | 0.715000 | no |
| DIF_cap_skin | YFB_gill_tissue | 0.677752 | no |
| DIF_cap_skin | YFB_veil | 0.692868 | no |
| DIF_cap_skin | DIF_cap_tissue | 0.908427 | no |
| DIF_cap_tissue | DIF_gill_tissue | 0.866443 | no |
| DIF_cap_tissue | YFB_stipe_center | 0.032978 | yes |
| DIF_cap_tissue | YFB_stipe_shell | 0.027451 | yes |
| DIF_cap_tissue | YFB_stipe_skin | 0.058347 | no |
| DIF_cap_tissue | YFB_cap_skin | 0.211358 | no |
| DIF_cap_tissue | YFB_cap_tissue | 0.851723 | no |
| DIF_cap_tissue | YFB_gill_tissue | 0.533876 | no |
| DIF_cap_tissue | YFB_veil | 0.542619 | no |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >AgabiH97|042550 MVSQPAPTTDTPPPPVSAGGTYSIQTVSVGCKLYIRRPGPDGQAEERLAEILSIREKPQNPYARPQAAKGDGLEK SEDNLEFFVHWEHFNKRLDDWVPGSRLVLSRDLEWPRPKVSAGKKNAPAPSKVSRGQNLLKRATSNAAKTSSPTP APSTPNLSGDYPSSPSPAPSSLKRKVPHDEEEEEEEEEDAEGEEDAEGEMDIDAQGEVQAFDITMQDVIPDLQPQ SQFSKEQEIEKLRTSGSMTQSISEITRVKNLNRLQIGKHEVDAWYFSPYPKEFAHLPILFICEYCLSFFPSQFMF SRHRKRCTMLHPPGNEIYRHEDISFYEIDGKRQLTWCRNLSLLSKCFLDHKTLYYDVTPFMYYVMAKRDSSGCHV IGYFSKEKESAENYNVACILTLPHHQRHGYGKLLIEFSYELSKKENKLGSPEKPLSDLGLLSYRAYWAETIVDLL LNTPEGELSIDEIAQRTSITHADVMNTCTTLQLFKHYKGQHMICLNNAVLDKHQKAVAKRRQRIHSELLRWKPPV FTREQLRFGW* |
| Coding | >AgabiH97|042550 ATGGTTTCTCAGCCAGCACCTACTACCGACACGCCGCCACCACCGGTCTCCGCGGGCGGCACGTACAGCATACAG ACCGTTTCGGTTGGTTGCAAACTCTACATCCGCCGCCCTGGCCCAGATGGCCAGGCAGAAGAACGGCTTGCCGAA ATTTTATCAATACGCGAGAAGCCCCAGAATCCCTATGCTCGCCCACAGGCTGCCAAGGGTGATGGTCTCGAGAAG TCGGAGGACAATCTGGAATTTTTCGTTCACTGGGAACACTTCAACAAGCGCCTGGATGACTGGGTGCCCGGCTCG CGACTGGTCCTCAGTCGCGACCTTGAATGGCCAAGACCGAAAGTCTCAGCAGGCAAGAAAAATGCACCTGCACCC AGCAAAGTATCCCGCGGCCAGAATCTATTAAAGAGGGCAACTTCCAATGCTGCCAAAACTTCCTCTCCCACTCCT GCCCCTTCCACCCCTAACCTCAGTGGTGACTACCCTTCATCGCCATCTCCTGCACCATCGTCTTTAAAAAGGAAA GTTCCTCATGACGAAGAGGAGGAAGAAGAAGAAGAAGAAGATGCTGAAGGCGAGGAGGATGCTGAAGGAGAGATG GATATCGATGCCCAAGGGGAAGTCCAAGCGTTTGATATCACTATGCAGGACGTGATTCCAGATCTTCAACCACAA TCCCAATTTAGCAAAGAACAGGAAATAGAGAAGTTACGGACCTCGGGATCCATGACTCAATCAATTTCAGAGATC ACACGAGTGAAAAACCTCAATCGCTTGCAGATTGGAAAGCACGAGGTGGATGCGTGGTACTTTAGCCCGTATCCG AAAGAATTCGCTCATCTGCCTATTTTATTCATTTGCGAATACTGTCTATCGTTCTTCCCTTCGCAGTTCATGTTT TCTCGCCACCGAAAACGCTGTACGATGCTACATCCTCCCGGGAACGAAATATACCGACATGAGGATATATCCTTC TATGAGATAGACGGCAAACGCCAATTGACATGGTGCAGAAATCTGAGCTTACTTTCCAAATGCTTCCTAGATCAT AAGACCCTTTACTATGATGTTACTCCATTCATGTACTATGTCATGGCGAAACGCGACTCGTCGGGATGCCATGTT ATCGGCTACTTCTCAAAAGAGAAGGAATCCGCTGAGAACTACAATGTTGCTTGTATCTTGACGCTTCCGCACCAC CAACGCCACGGCTATGGCAAACTTTTAATCGAATTTTCCTACGAGCTCAGCAAAAAGGAAAATAAACTCGGAAGT CCTGAGAAACCCCTCAGTGATCTGGGTTTACTTTCATACCGAGCTTATTGGGCGGAAACGATCGTCGACCTTCTA TTGAATACGCCAGAGGGCGAGCTCAGCATTGATGAGATAGCTCAGAGGACATCAATCACACATGCGGACGTCATG AATACGTGTACAACACTGCAGCTGTTCAAACACTACAAAGGACAACATATGATATGCTTGAATAATGCCGTTCTA GATAAACATCAGAAAGCCGTGGCCAAACGACGACAACGAATTCATTCAGAGTTACTCAGGTGGAAGCCGCCTGTG TTTACTCGAGAACAGCTACGTTTTGGGTGGTAA |
| Transcript | >AgabiH97|042550 ATGGTTTCTCAGCCAGCACCTACTACCGACACGCCGCCACCACCGGTCTCCGCGGGCGGCACGTACAGCATACAG ACCGTTTCGGTTGGTTGCAAACTCTACATCCGCCGCCCTGGCCCAGATGGCCAGGCAGAAGAACGGCTTGCCGAA ATTTTATCAATACGCGAGAAGCCCCAGAATCCCTATGCTCGCCCACAGGCTGCCAAGGGTGATGGTCTCGAGAAG TCGGAGGACAATCTGGAATTTTTCGTTCACTGGGAACACTTCAACAAGCGCCTGGATGACTGGGTGCCCGGCTCG CGACTGGTCCTCAGTCGCGACCTTGAATGGCCAAGACCGAAAGTCTCAGCAGGCAAGAAAAATGCACCTGCACCC AGCAAAGTATCCCGCGGCCAGAATCTATTAAAGAGGGCAACTTCCAATGCTGCCAAAACTTCCTCTCCCACTCCT GCCCCTTCCACCCCTAACCTCAGTGGTGACTACCCTTCATCGCCATCTCCTGCACCATCGTCTTTAAAAAGGAAA GTTCCTCATGACGAAGAGGAGGAAGAAGAAGAAGAAGAAGATGCTGAAGGCGAGGAGGATGCTGAAGGAGAGATG GATATCGATGCCCAAGGGGAAGTCCAAGCGTTTGATATCACTATGCAGGACGTGATTCCAGATCTTCAACCACAA TCCCAATTTAGCAAAGAACAGGAAATAGAGAAGTTACGGACCTCGGGATCCATGACTCAATCAATTTCAGAGATC ACACGAGTGAAAAACCTCAATCGCTTGCAGATTGGAAAGCACGAGGTGGATGCGTGGTACTTTAGCCCGTATCCG AAAGAATTCGCTCATCTGCCTATTTTATTCATTTGCGAATACTGTCTATCGTTCTTCCCTTCGCAGTTCATGTTT TCTCGCCACCGAAAACGCTGTACGATGCTACATCCTCCCGGGAACGAAATATACCGACATGAGGATATATCCTTC TATGAGATAGACGGCAAACGCCAATTGACATGGTGCAGAAATCTGAGCTTACTTTCCAAATGCTTCCTAGATCAT AAGACCCTTTACTATGATGTTACTCCATTCATGTACTATGTCATGGCGAAACGCGACTCGTCGGGATGCCATGTT ATCGGCTACTTCTCAAAAGAGAAGGAATCCGCTGAGAACTACAATGTTGCTTGTATCTTGACGCTTCCGCACCAC CAACGCCACGGCTATGGCAAACTTTTAATCGAATTTTCCTACGAGCTCAGCAAAAAGGAAAATAAACTCGGAAGT CCTGAGAAACCCCTCAGTGATCTGGGTTTACTTTCATACCGAGCTTATTGGGCGGAAACGATCGTCGACCTTCTA TTGAATACGCCAGAGGGCGAGCTCAGCATTGATGAGATAGCTCAGAGGACATCAATCACACATGCGGACGTCATG AATACGTGTACAACACTGCAGCTGTTCAAACACTACAAAGGACAACATATGATATGCTTGAATAATGCCGTTCTA GATAAACATCAGAAAGCCGTGGCCAAACGACGACAACGAATTCATTCAGAGTTACTCAGGTGGAAGCCGCCTGTG TTTACTCGAGAACAGCTACGTTTTGGGTGGTAA |
| Gene | >AgabiH97|042550 ATGGTTTCTCAGCCAGCACCTACTACCGACACGCCGCCACCACCGGTCTCCGCGGGCGGCACGTACAGCATACAG GTGAGCTAGGGCTGCCGCTGTTCAATCTGACTGTGGAGGTCCGATGACTCACGTGCTTTGATCAGACCGTTTCGG TTGGTTGCAAACTCTACATCCGCCGCCCTGGCCCAGATGGCCAGGCAGAAGAACGGCTTGCCGAAATTTTATCAA TACGCGAGAAGCCCCAGAATCCCTATGCTCGCCCACAGGCTGCCAAGGGTGATGGTCTCGAGAAGTCGGAGGACA ATCTGGAATTTTTCGTTCACTGGGAACACTTCAACAAGCGCCTGGATGACTGGGTGCCCGGCTCGCGACTGGTCC TCAGTCGCGACCTTGAATGGCCAAGACCGAAAGTCTCAGCAGGCAAGAAAAATGCACCTGCACCCAGCAAAGTAT CCCGCGGCCAGAATCTATTAAAGAGGGCAACTTCCAATGCTGCCAAAACTTCCTCTCCCACTCCTGCCCCTTCCA CCCCTAACCTCAGTGGTGACTACCCTTCATCGCCATCTCCTGCACCATCGTCTTTAAAAAGGAAAGTTCCTCATG ACGAAGAGGAGGAAGAAGAAGAAGAAGAAGATGCTGAAGGCGAGGAGGATGCTGAAGGAGAGATGGATATCGATG CCCAAGGGGAAGTCCAAGCGTTTGATATCACTATGCAGGACGTGATTCCAGATCTTCAACCACAATCCCAATTTA GCAAAGAACAGGAAATAGAGAAGTTACGGACCTCGGGATCCATGACTCAATCAATTTCAGAGATCACACGAGTGA AAAACCTCAATCGCTTGCAGATTGGAAAGCACGAGGTGGATGCGTGGTACTTTAGCCCGTATCCGAAAGAATTCG CTCATCTGCCTATTTTATTCATTTGCGAATACTGTCTATCGTTCTTCCCTTCGCAGTTCATGTTTTCTCGCCACC GAAAACGCTGTACGATGCTACATCCTCCCGGGAACGAAATATACCGACATGAGGATATATCCTTCTATGAGATAG ACGGCAAACGCCAATTGACATGGTGCAGAAATCTGAGCTTACTTTCCAAATGCTTCCTAGATCAGTGAGTGGCCT TCGCTTGAAAGATTACTCAACGATTCCTGACATTTCTCTTGCTCAGTAAGACCCTTTACTATGATGTTACTCCAT TCATGTACTATGTCATGGTTCGATATCCAGTCATACCCATCTTGATTACCCTACTAAGCACTTATCGCAGGCGAA ACGCGACTCGTCGGGATGCCATGTTATCGGCTACTTCTCAAAAGAGAAGGAATCCGCTGAGAACTACAATGTTGC TTGTATCTTGACGCTTCCGCACCACCAACGCCACGGCTATGGCAAACTTTTAATCGAATTTTCCTACGAGCTCAG CAAAAAGGAAAATAAACTCGGAAGTCCTGAGAAACCCCTCAGTGATCTGGGTTTACTTTCATACCGAGCTTATTG GGCGGAAACGATCGTCGACCTTCTATTGAATACGCCAGAGGGCGAGCTCAGCATTGATGAGATAGCTCAGAGGAC ATCAATCACACATGCGGACGTCATGAATACGTATGTCACTTTTGCTATCCCCCGACTCTGCACAGCGCTCATCTC AGTTCTAGGTGTACAACACTGCAGCTGTTCAAACACTACAAAGGACAACATATGATATGCTTGAATAATGCCGTT CTAGATAAACATCAGAAAGCCGTGGCCAAACGACGACAACGAATTCATTCAGAGTTACTCAGGTGGAAGCCGCCT GTGTTTACTCGAGAACAGCTACGTTTTGGGTGGTAA |