Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabiH97|041850
Gene name
Locationscaffold_2:850011..851803
Strand-
Gene length (bp)1792
Transcript length (bp)1434
Coding sequence length (bp)1434
Protein length (aa) 478

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00704 Glyco_hydro_18 Glycosyl hydrolases family 18 2.3E-53 42 405

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|P20533|CHIA1_BACCI Chitinase A1 OS=Bacillus circulans GN=chiA1 PE=1 SV=1 99 438 2.0E-25
sp|Q95M17|CHIA_BOVIN Acidic mammalian chitinase OS=Bos taurus GN=CHIA PE=1 SV=1 61 406 9.0E-25
sp|P48827|CHI42_TRIHA Endochitinase 42 OS=Trichoderma harzianum GN=chit42 PE=1 SV=1 98 419 3.0E-23
sp|P36362|CHIT_MANSE Endochitinase OS=Manduca sexta PE=2 SV=1 50 440 4.0E-23
sp|Q91XA9|CHIA_MOUSE Acidic mammalian chitinase OS=Mus musculus GN=Chia PE=1 SV=2 61 406 4.0E-23
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Swissprot ID Swissprot Description Start End E-value
sp|P20533|CHIA1_BACCI Chitinase A1 OS=Bacillus circulans GN=chiA1 PE=1 SV=1 99 438 2.0E-25
sp|Q95M17|CHIA_BOVIN Acidic mammalian chitinase OS=Bos taurus GN=CHIA PE=1 SV=1 61 406 9.0E-25
sp|P48827|CHI42_TRIHA Endochitinase 42 OS=Trichoderma harzianum GN=chit42 PE=1 SV=1 98 419 3.0E-23
sp|P36362|CHIT_MANSE Endochitinase OS=Manduca sexta PE=2 SV=1 50 440 4.0E-23
sp|Q91XA9|CHIA_MOUSE Acidic mammalian chitinase OS=Mus musculus GN=Chia PE=1 SV=2 61 406 4.0E-23
sp|Q6RY07|CHIA_RAT Acidic mammalian chitinase OS=Rattus norvegicus GN=Chia PE=2 SV=1 61 406 5.0E-23
sp|Q9D7Q1|CHIT1_MOUSE Chitotriosidase-1 OS=Mus musculus GN=Chit1 PE=1 SV=2 61 406 1.0E-22
sp|Q9W5U2|CHIT3_DROME Probable chitinase 3 OS=Drosophila melanogaster GN=Cht3 PE=2 SV=2 61 406 3.0E-22
sp|Q9BZP6|CHIA_HUMAN Acidic mammalian chitinase OS=Homo sapiens GN=CHIA PE=1 SV=1 61 406 5.0E-22
sp|P32470|CHI1_APHAL Chitinase 1 OS=Aphanocladium album GN=CHI1 PE=1 SV=2 90 421 8.0E-22
sp|Q13231|CHIT1_HUMAN Chitotriosidase-1 OS=Homo sapiens GN=CHIT1 PE=1 SV=1 61 406 2.0E-21
sp|A6N6J0|CHI46_TRIHA Endochitinase 46 OS=Trichoderma harzianum GN=chit46 PE=1 SV=1 98 419 1.0E-20
sp|A5FB63|CHIA_FLAJ1 Chitinase ChiA OS=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) GN=chiA PE=1 SV=1 41 416 2.0E-20
sp|G5EAZ3|CHIB1_EMENI Endochitinase B OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=chiB PE=1 SV=1 40 405 9.0E-20
sp|Q92222|CHIB_EMEND Endochitinase B OS=Emericella nidulans GN=chiB PE=1 SV=3 40 405 9.0E-20
sp|Q11174|CHIT_CAEEL Probable endochitinase OS=Caenorhabditis elegans GN=cht-1 PE=1 SV=1 99 408 4.0E-19
sp|Q9W5U2|CHIT3_DROME Probable chitinase 3 OS=Drosophila melanogaster GN=Cht3 PE=2 SV=2 61 406 5.0E-19
sp|Q9W5U2|CHIT3_DROME Probable chitinase 3 OS=Drosophila melanogaster GN=Cht3 PE=2 SV=2 50 284 8.0E-19
sp|E9QRF2|CHIB1_ASPFU Endochitinase B1 OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=chiB1 PE=3 SV=1 29 417 9.0E-19
sp|Q873X9|CHIB1_ASPFM Endochitinase B1 OS=Neosartorya fumigata GN=chiB1 PE=1 SV=1 29 417 9.0E-19
sp|Q28542|OVGP1_SHEEP Oviduct-specific glycoprotein OS=Ovis aries GN=OVGP1 PE=1 SV=1 61 406 9.0E-19
sp|Q28042|OVGP1_BOVIN Oviduct-specific glycoprotein (Fragment) OS=Bos taurus GN=OVGP1 PE=1 SV=1 61 406 9.0E-19
sp|Q12889|OVGP1_HUMAN Oviduct-specific glycoprotein OS=Homo sapiens GN=OVGP1 PE=2 SV=1 61 406 2.0E-18
sp|Q9W092|CHIT2_DROME Probable chitinase 2 OS=Drosophila melanogaster GN=Cht2 PE=1 SV=1 61 406 6.0E-18
sp|P36718|OVGP1_PAPAN Oviduct-specific glycoprotein OS=Papio anubis GN=OVGP1 PE=2 SV=2 61 406 2.0E-17
sp|Q91Z98|CHIL4_MOUSE Chitinase-like protein 4 OS=Mus musculus GN=Chil4 PE=1 SV=2 61 406 3.0E-17
sp|O35744|CHIL3_MOUSE Chitinase-like protein 3 OS=Mus musculus GN=Chil3 PE=1 SV=2 61 406 4.0E-17
sp|Q1E3R8|CHI1_COCIM Endochitinase 1 OS=Coccidioides immitis (strain RS) GN=CTS1 PE=3 SV=1 4 405 6.0E-17
sp|Q61362|CH3L1_MOUSE Chitinase-3-like protein 1 OS=Mus musculus GN=Chi3l1 PE=1 SV=3 61 284 7.0E-17
sp|C5P230|CHI1_COCP7 Endochitinase 1 OS=Coccidioides posadasii (strain C735) GN=CTS1 PE=3 SV=1 4 405 7.0E-17
sp|Q62010|OVGP1_MOUSE Oviduct-specific glycoprotein OS=Mus musculus GN=Ovgp1 PE=2 SV=1 61 406 1.0E-16
sp|P0CB51|CHI1_COCPS Endochitinase 1 OS=Coccidioides posadasii (strain RMSCC 757 / Silveira) GN=CTS1 PE=1 SV=1 58 405 1.0E-16
sp|Q60557|OVGP1_MESAU Oviduct-specific glycoprotein OS=Mesocricetus auratus GN=OVGP1 PE=1 SV=1 61 406 2.0E-16
sp|Q9WTV1|CH3L1_RAT Chitinase-3-like protein 1 OS=Rattus norvegicus GN=Chi3l1 PE=2 SV=3 99 284 1.0E-15
sp|Q29411|CH3L1_PIG Chitinase-3-like protein 1 OS=Sus scrofa GN=CHI3L1 PE=1 SV=2 61 406 1.0E-15
sp|E9ERT9|CHI1_METRA Endochitinase 1 OS=Metarhizium robertsii (strain ARSEF 23 / ATCC MYA-3075) GN=chit1 PE=3 SV=1 90 405 3.0E-15
sp|Q5RBP6|CH3L1_PONAB Chitinase-3-like protein 1 OS=Pongo abelii GN=CHI3L1 PE=2 SV=1 61 284 4.0E-15
sp|Q6TMG6|CH3L1_SHEEP Chitinase-3-like protein 1 OS=Ovis aries GN=CHI3L1 PE=1 SV=1 61 406 5.0E-15
sp|P36222|CH3L1_HUMAN Chitinase-3-like protein 1 OS=Homo sapiens GN=CHI3L1 PE=1 SV=2 61 284 6.0E-15
sp|Q28990|OVGP1_PIG Oviduct-specific glycoprotein OS=Sus scrofa GN=OVGP1 PE=2 SV=1 61 406 2.0E-14
sp|O10363|CHIT_NPVOP Probable endochitinase OS=Orgyia pseudotsugata multicapsid polyhedrosis virus GN=ORF124 PE=3 SV=1 104 410 2.0E-14
sp|P30922|CH3L1_BOVIN Chitinase-3-like protein 1 OS=Bos taurus GN=CHI3L1 PE=1 SV=3 61 284 3.0E-14
sp|Q7YS85|CH3L1_BUBBU Chitinase-3-like protein 1 OS=Bubalus bubalis GN=CHI3L1 PE=1 SV=3 61 284 5.0E-14
sp|P32823|CHIA_PSEO7 Chitinase A OS=Pseudoalteromonas piscicida GN=chiA PE=1 SV=1 104 455 8.0E-14
sp|P96156|CHID_VIBFU Chitodextrinase OS=Vibrio furnissii GN=endo I PE=1 SV=1 2 413 8.0E-14
sp|P11797|CHIB_SERMA Chitinase B OS=Serratia marcescens GN=chiB PE=1 SV=1 50 426 1.0E-13
sp|Q8SPQ0|CH3L1_CAPHI Chitinase-3-like protein 1 OS=Capra hircus GN=CHI3L1 PE=1 SV=1 61 284 3.0E-13
sp|P07254|CHIA_SERMA Chitinase A OS=Serratia marcescens GN=chiA PE=1 SV=3 77 410 3.0E-13
sp|O14456|CHI1_METAN Endochitinase 1 OS=Metarhizium anisopliae GN=chit1 PE=1 SV=1 90 405 3.0E-13
sp|P41684|CHIT_NPVAC Probable endochitinase OS=Autographa californica nuclear polyhedrosis virus PE=3 SV=1 104 410 4.0E-13
sp|P36909|CHIT_STRLI Chitinase C OS=Streptomyces lividans GN=chiC PE=2 SV=1 52 280 4.0E-13
sp|Q5AM60|CHI4_CANAL Chitinase 4 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=CHT4 PE=3 SV=1 24 405 6.0E-13
sp|P11220|CHIT_STRPL Chitinase 63 OS=Streptomyces plicatus GN=chtA PE=1 SV=2 99 280 1.0E-12
sp|Q15782|CH3L2_HUMAN Chitinase-3-like protein 2 OS=Homo sapiens GN=CHI3L2 PE=1 SV=1 61 289 2.0E-12
sp|Q06350|CHI2_YEAST Sporulation-specific chitinase 2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=CTS2 PE=1 SV=1 100 421 6.0E-11
sp|H2A0L4|CHI1_PINMG Putative chitinase 1 OS=Pinctada margaritifera PE=1 SV=1 61 406 4.0E-09
sp|P09805|KTXA_KLULA Killer toxin subunits alpha/beta OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) PE=1 SV=1 104 279 4.0E-09
sp|H2A0L5|CHI2_PINMG Putative chitinase 2 OS=Pinctada margaritifera PE=1 SV=1 61 406 7.0E-09
sp|P86955|CHI_PINMA Putative chitinase OS=Pinctada maxima PE=1 SV=1 103 406 1.0E-08
sp|Q9W5U2|CHIT3_DROME Probable chitinase 3 OS=Drosophila melanogaster GN=Cht3 PE=2 SV=2 65 284 2.0E-08
sp|P29030|CHIT_BRUMA Endochitinase OS=Brugia malayi PE=1 SV=1 61 287 2.0E-08
sp|O05495|YDHD_BACSU Putative sporulation-specific glycosylase YdhD OS=Bacillus subtilis (strain 168) GN=ydhD PE=1 SV=2 124 282 4.0E-06
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GO

GO Term Description Terminal node
GO:0005975 carbohydrate metabolic process Yes
GO:0008152 metabolic process No
GO:0008150 biological_process No
GO:0071704 organic substance metabolic process No
GO:0044238 primary metabolic process No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
Yes 1 - 20 0.45

Transmembrane Domains

Domain # Start End Length
1 451 473 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Developmental stages of Agaricus bisporus (strain A15). Published in Pelkmans et al, Applied Microbiology and Biotechnology, 2016

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >AgabiH97|041850
MWPLPAAVLILASIPAAHPHKHHRHRRQEQGASPSLISSAWFAGWHATDFPLTNVSWEKYTHMNYAFAVTTPKPD
LISLAPPDQELLPKFVSAAHKNGVKAGLSIGGWTGSQFFSPGVGSSKNRTAFVQAVTDLVEQYSLDAIDFDWEFP
ALPGIGCNVFNANDTSNFLSFLKELRSSPIGRHLILTAAVYTKPFADNTGQPSNDLAGFSQVLDHITIMNYDAKS
TPTTGAGPNAPLEDSCAPSASQSGSARSALNSWTAAGIPAHQILLGVPSYGHSFVIPSSVALSGQDNLTLGLYPP
YVSDNTQKGDRWDGDAGTDVCGNPVGPGGVYTLWGLIEEGFLNTDGTVRQGIDYRYDNCSQTPFLYDQSKQVFVS
YDNAMSFAAKGNFVNVTGMAGFAMWEAGGDDKNMLLDSIISAAHDGDPSRFASPSNAGNSAPTTQASGASKLRSH
GMLDLIVATAASLPLFFFLPVTLMQSF*
Coding >AgabiH97|041850
ATGTGGCCGTTACCTGCTGCTGTTCTCATTTTGGCGTCCATCCCAGCAGCTCACCCGCATAAACACCACCGACAC
CGGAGGCAAGAGCAGGGCGCGTCACCGTCACTCATTTCTTCTGCATGGTTTGCCGGCTGGCATGCGACGGACTTT
CCTTTGACAAATGTGAGCTGGGAAAAATACACACATATGAATTATGCCTTCGCCGTCACAACACCCAAACCTGAT
CTCATTTCACTCGCACCCCCGGATCAGGAGCTCCTGCCCAAGTTTGTTTCCGCCGCTCATAAGAACGGCGTAAAA
GCCGGTCTTTCCATCGGAGGTTGGACTGGCTCGCAGTTTTTCTCGCCCGGCGTTGGCTCGTCCAAGAATCGAACA
GCCTTTGTCCAAGCCGTTACAGACCTGGTAGAGCAATACTCACTAGACGCTATTGATTTCGATTGGGAGTTTCCC
GCTTTGCCAGGAATAGGTTGTAATGTCTTCAACGCCAATGACACCTCCAATTTTCTCTCATTCCTGAAAGAGCTT
CGATCGAGCCCTATTGGACGGCATCTAATTCTCACCGCCGCTGTCTATACCAAACCCTTCGCTGACAATACTGGA
CAACCATCCAATGATCTCGCTGGGTTCAGCCAGGTTCTAGACCATATCACTATCATGAATTACGACGCAAAGTCG
ACACCAACAACTGGTGCTGGCCCCAATGCGCCATTAGAAGATTCATGTGCACCGTCTGCAAGTCAGTCTGGATCT
GCGAGATCTGCTCTCAACAGTTGGACTGCTGCAGGGATCCCCGCACATCAAATCCTGTTGGGTGTACCCTCATAT
GGTCATTCCTTCGTTATACCGTCTTCCGTCGCGCTGTCGGGGCAGGACAACTTAACGCTCGGTTTATACCCTCCC
TATGTCTCCGATAACACCCAGAAAGGGGATCGCTGGGATGGTGATGCTGGAACAGATGTTTGTGGAAACCCTGTA
GGCCCTGGAGGCGTTTATACCCTCTGGGGCCTCATAGAAGAAGGCTTCCTAAATACCGATGGAACGGTACGCCAG
GGAATTGATTATCGATATGATAACTGCAGCCAGACGCCATTTTTATATGACCAGTCCAAACAAGTCTTCGTCTCG
TATGATAACGCCATGTCCTTCGCTGCCAAAGGCAACTTCGTCAACGTGACCGGTATGGCTGGATTTGCTATGTGG
GAGGCCGGAGGGGACGACAAGAACATGCTTCTCGACTCCATAATCTCCGCAGCACACGATGGCGATCCTTCGCGC
TTCGCCTCGCCCTCTAATGCAGGTAACTCTGCTCCGACAACCCAAGCTTCCGGTGCCAGCAAACTGCGATCACAC
GGCATGCTTGATCTAATCGTTGCCACCGCCGCATCACTACCGCTGTTCTTTTTCTTGCCCGTCACTCTCATGCAG
TCATTCTAG
Transcript >AgabiH97|041850
ATGTGGCCGTTACCTGCTGCTGTTCTCATTTTGGCGTCCATCCCAGCAGCTCACCCGCATAAACACCACCGACAC
CGGAGGCAAGAGCAGGGCGCGTCACCGTCACTCATTTCTTCTGCATGGTTTGCCGGCTGGCATGCGACGGACTTT
CCTTTGACAAATGTGAGCTGGGAAAAATACACACATATGAATTATGCCTTCGCCGTCACAACACCCAAACCTGAT
CTCATTTCACTCGCACCCCCGGATCAGGAGCTCCTGCCCAAGTTTGTTTCCGCCGCTCATAAGAACGGCGTAAAA
GCCGGTCTTTCCATCGGAGGTTGGACTGGCTCGCAGTTTTTCTCGCCCGGCGTTGGCTCGTCCAAGAATCGAACA
GCCTTTGTCCAAGCCGTTACAGACCTGGTAGAGCAATACTCACTAGACGCTATTGATTTCGATTGGGAGTTTCCC
GCTTTGCCAGGAATAGGTTGTAATGTCTTCAACGCCAATGACACCTCCAATTTTCTCTCATTCCTGAAAGAGCTT
CGATCGAGCCCTATTGGACGGCATCTAATTCTCACCGCCGCTGTCTATACCAAACCCTTCGCTGACAATACTGGA
CAACCATCCAATGATCTCGCTGGGTTCAGCCAGGTTCTAGACCATATCACTATCATGAATTACGACGCAAAGTCG
ACACCAACAACTGGTGCTGGCCCCAATGCGCCATTAGAAGATTCATGTGCACCGTCTGCAAGTCAGTCTGGATCT
GCGAGATCTGCTCTCAACAGTTGGACTGCTGCAGGGATCCCCGCACATCAAATCCTGTTGGGTGTACCCTCATAT
GGTCATTCCTTCGTTATACCGTCTTCCGTCGCGCTGTCGGGGCAGGACAACTTAACGCTCGGTTTATACCCTCCC
TATGTCTCCGATAACACCCAGAAAGGGGATCGCTGGGATGGTGATGCTGGAACAGATGTTTGTGGAAACCCTGTA
GGCCCTGGAGGCGTTTATACCCTCTGGGGCCTCATAGAAGAAGGCTTCCTAAATACCGATGGAACGGTACGCCAG
GGAATTGATTATCGATATGATAACTGCAGCCAGACGCCATTTTTATATGACCAGTCCAAACAAGTCTTCGTCTCG
TATGATAACGCCATGTCCTTCGCTGCCAAAGGCAACTTCGTCAACGTGACCGGTATGGCTGGATTTGCTATGTGG
GAGGCCGGAGGGGACGACAAGAACATGCTTCTCGACTCCATAATCTCCGCAGCACACGATGGCGATCCTTCGCGC
TTCGCCTCGCCCTCTAATGCAGGTAACTCTGCTCCGACAACCCAAGCTTCCGGTGCCAGCAAACTGCGATCACAC
GGCATGCTTGATCTAATCGTTGCCACCGCCGCATCACTACCGCTGTTCTTTTTCTTGCCCGTCACTCTCATGCAG
TCATTCTAG
Gene >AgabiH97|041850
ATGTGGCCGTTACCTGCTGCTGTTCTCATTTTGGCGTCCATCCCAGCAGCTCACCCGCATAAACACCACCGACAC
CGGAGGCAAGAGCAGGGCGCGTCACCGTCACTCATTTCTTCTGCATGGTTTGCCGGCTGGCATGCGACGGACTTT
CCTTTGACAAATGTGAGCTGGGAAAAATACACACATATGAATTATGCCTTCGCGTGCGTCGTCTATTGTATTGTC
TGCTAAACAACCAGTGGAACTTTAATAACCCAGCGTCACAACACCCAAACCTGATCTCATTTCACTCGCACCCCC
GGATCAGGAGCTCCTGCCCAAGTTTGTTTCCGCCGCTCATAAGAACGTAAGCCCTCCTTCCTTCTCTGACGACTT
CGCTTGATGCTTGTCACAGGGCGTAAAAGCCGGTCTTTCCATCGGAGGTTGGACTGGCTCGCAGTTTTTCTCGCC
CGGCGTTGGCTCGTCCAAGAATCGAACAGCCTTTGTCCAAGCCGTTACAGACCTGGTAGAGCAATACTCACTAGA
CGCTATTGATTTCGAGTATGTCCTCATCTTCTCTTGCTGCCATCTAATCTAATTCGTTCCAAGTTGGGAGTTTCC
CGCTTTGCCAGGAATAGGTTGTAATGTCTTCAACGCCAATGACACCTCCAATTTTCTCTCATTCCTGAAAGAGCT
TCGATCGAGCCCTATTGGACGGCATCTAATTCTCACCGCCGCTGTCTATACCAAACCCTTCGCTGACAATACTGG
ACAACCATCCAATGATCTCGCTGGGTTCAGCCAGGTTCTAGACCATATCACTATCATGAATTACGACGCAAAGTC
GACACCAACAACTGGTGCTGGCCCCAATGCGCCATTAGAAGATTCATGTGCACCGTCTGCAAGTCAGTCTGGATC
TGCGAGATCTGCTCTCAACAGTTGGACTGCTGCAGGGATCCCCGCACATCAAATCCTGTTGGGTGTACCCTCATA
TGGTCATTCCTTCGTTATACCGTCTTCCGTCGCGCTGTCGGGGCAGGACAACTTAACGCTCGGTTTATACCCTCC
CTATGTCTCCGATAACACCCAGAAAGGGGATCGCTGGGATGGTGATGCTGGAACAGATGTTTGTGGAAACCCTGT
AGGCCCTGGAGGCGTTTATACCCTCTGGGGCCTCATAGAAGAAGGCTTCCTAAATACCGATGGAACGGTACGCCA
GGGAATTGATTATCGATATGATAACTGCAGCCAGACGGTAAGCAAATCCTGTTCTTGGTGTTGACAGTTATCATT
CTCGTGCTACCCTGCCTTCTTCACATCTTACTTCCTCCGTTTCCCCACACATTTCGGTATTTTAAGTCTACGGTC
CGCTAATGGAAGCAATTCTCGTTCTTTTTTTCTAGCCATTTTTATATGACCAGTCCAAACAAGTCTTCGTCTCGT
ATGATAACGCCATGTCCTTCGCTGCCAAAGGCAACTTCGTCAACGTGACCGGTATGGCTGGATTTGCTATGTGGG
AGGCCGGAGGGGACGACAAGAACATGCTTCTCGACTCCATAAGTGCGTATAACTCACTAACAGCTGAGAAGGCAC
AAATCTCTAATATCTTCCCATTGTAGTCTCCGCAGCACACGATGGCGATCCTTCGCGCTTCGCCTCGCCCTCTAA
TGCAGGTAACTCTGCTCCGACAACCCAAGCTTCCGGTGCCAGCAAACTGCGATCACACGGCATGCTTGATCTAAT
CGTTGCCACCGCCGCATCACTACCGCTGTTCTTTTTCTTGCCCGTCACTCTCATGCAGTCATTCTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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