Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabiH97|041640
Gene name
Locationscaffold_2:797433..799833
Strand+
Gene length (bp)2400
Transcript length (bp)1926
Coding sequence length (bp)1926
Protein length (aa) 642

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00249 Myb_DNA-binding Myb-like DNA-binding domain 2.6E-10 88 130
PF04433 SWIRM SWIRM domain 1.1E-09 499 566

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|Q59WH0|ADA2_CANAL Transcriptional adapter 2 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=ADA2 PE=3 SV=1 25 214 9.0E-51
sp|Q02336|ADA2_YEAST Transcriptional adapter 2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ADA2 PE=1 SV=1 24 214 4.0E-47
sp|Q75LL6|TADA2_ORYSJ Transcriptional adapter ADA2 OS=Oryza sativa subsp. japonica GN=ADA2 PE=2 SV=2 25 562 1.0E-44
sp|Q9ATB4|TAD2B_ARATH Transcriptional adapter ADA2b OS=Arabidopsis thaliana GN=ADA2B PE=1 SV=1 20 568 3.0E-44
sp|Q59WH0|ADA2_CANAL Transcriptional adapter 2 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=ADA2 PE=3 SV=1 300 565 2.0E-43
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Swissprot ID Swissprot Description Start End E-value
sp|Q59WH0|ADA2_CANAL Transcriptional adapter 2 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=ADA2 PE=3 SV=1 25 214 9.0E-51
sp|Q02336|ADA2_YEAST Transcriptional adapter 2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ADA2 PE=1 SV=1 24 214 4.0E-47
sp|Q75LL6|TADA2_ORYSJ Transcriptional adapter ADA2 OS=Oryza sativa subsp. japonica GN=ADA2 PE=2 SV=2 25 562 1.0E-44
sp|Q9ATB4|TAD2B_ARATH Transcriptional adapter ADA2b OS=Arabidopsis thaliana GN=ADA2B PE=1 SV=1 20 568 3.0E-44
sp|Q59WH0|ADA2_CANAL Transcriptional adapter 2 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=ADA2 PE=3 SV=1 300 565 2.0E-43
sp|Q9SFD5|TAD2A_ARATH Transcriptional adapter ADA2a OS=Arabidopsis thaliana GN=ADA2A PE=1 SV=1 20 565 6.0E-42
sp|Q02336|ADA2_YEAST Transcriptional adapter 2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ADA2 PE=1 SV=1 300 566 9.0E-42
sp|Q9P7J7|ADA2_SCHPO Transcriptional adapter 2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=ada2 PE=1 SV=1 21 214 4.0E-40
sp|Q9P7J7|ADA2_SCHPO Transcriptional adapter 2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=ada2 PE=1 SV=1 315 566 3.0E-30
sp|Q3SZP8|TAD2A_BOVIN Transcriptional adapter 2-alpha OS=Bos taurus GN=TADA2A PE=2 SV=1 320 566 5.0E-26
sp|O75478|TAD2A_HUMAN Transcriptional adapter 2-alpha OS=Homo sapiens GN=TADA2A PE=1 SV=3 320 566 2.0E-25
sp|Q5ZJF3|TAD2A_CHICK Transcriptional adapter 2-alpha OS=Gallus gallus GN=TADA2A PE=2 SV=1 320 566 3.0E-24
sp|Q6AYE3|TAD2A_RAT Transcriptional adapter 2-alpha OS=Rattus norvegicus GN=Tada2a PE=2 SV=1 320 566 3.0E-23
sp|Q8CHV6|TAD2A_MOUSE Transcriptional adapter 2-alpha OS=Mus musculus GN=Tada2a PE=1 SV=1 320 566 4.0E-23
sp|Q503N9|TAD2B_DANRE Transcriptional adapter 2-beta OS=Danio rerio GN=tada2b PE=2 SV=1 22 134 1.0E-16
sp|Q6AYE3|TAD2A_RAT Transcriptional adapter 2-alpha OS=Rattus norvegicus GN=Tada2a PE=2 SV=1 19 241 2.0E-16
sp|O75478|TAD2A_HUMAN Transcriptional adapter 2-alpha OS=Homo sapiens GN=TADA2A PE=1 SV=3 19 241 4.0E-16
sp|Q8CHV6|TAD2A_MOUSE Transcriptional adapter 2-alpha OS=Mus musculus GN=Tada2a PE=1 SV=1 19 241 5.0E-16
sp|Q3SZP8|TAD2A_BOVIN Transcriptional adapter 2-alpha OS=Bos taurus GN=TADA2A PE=2 SV=1 19 241 3.0E-15
sp|Q6NRB5|TAD2B_XENLA Transcriptional adapter 2-beta OS=Xenopus laevis GN=tada2b PE=2 SV=1 27 212 4.0E-14
sp|Q5ZJF3|TAD2A_CHICK Transcriptional adapter 2-alpha OS=Gallus gallus GN=TADA2A PE=2 SV=1 19 137 1.0E-13
sp|Q86TJ2|TAD2B_HUMAN Transcriptional adapter 2-beta OS=Homo sapiens GN=TADA2B PE=1 SV=2 18 212 1.0E-13
sp|Q5RBN9|TAD2B_PONAB Transcriptional adapter 2-beta OS=Pongo abelii GN=TADA2B PE=2 SV=1 18 212 1.0E-13
sp|Q8I8V0|TAD2B_DROME Transcriptional adapter 2B OS=Drosophila melanogaster GN=Ada2b PE=1 SV=1 15 214 3.0E-13
sp|Q7KSD8|TAD2A_DROME Transcriptional adapter 2A OS=Drosophila melanogaster GN=Rpb4 PE=1 SV=1 312 566 2.0E-11
sp|Q5RBN9|TAD2B_PONAB Transcriptional adapter 2-beta OS=Pongo abelii GN=TADA2B PE=2 SV=1 352 566 1.0E-08
sp|Q86TJ2|TAD2B_HUMAN Transcriptional adapter 2-beta OS=Homo sapiens GN=TADA2B PE=1 SV=2 352 566 1.0E-08
sp|Q6NRB5|TAD2B_XENLA Transcriptional adapter 2-beta OS=Xenopus laevis GN=tada2b PE=2 SV=1 318 566 2.0E-08
sp|Q7KSD8|TAD2A_DROME Transcriptional adapter 2A OS=Drosophila melanogaster GN=Rpb4 PE=1 SV=1 27 134 3.0E-08
sp|O13719|LAF1_SCHPO SWIRM domain-containing protein laf1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=laf1 PE=1 SV=1 488 566 5.0E-07
sp|O74443|LAF2_SCHPO SWIRM domain-containing protein laf2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=laf2 PE=1 SV=1 488 566 3.0E-06
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GO

GO Term Description Terminal node
GO:0005515 protein binding Yes
GO:0005488 binding No
GO:0003674 molecular_function No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 37 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Developmental stages of Agaricus bisporus (strain A15). Published in Pelkmans et al, Applied Microbiology and Biotechnology, 2016

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >AgabiH97|041640
MTVTQRKSQHIPDEVQTVNEPGEQYECDACACDLTHTVRIKCADPVCTNDEGVDICPACFCAGKEFKDHKRWHSY
RVIELNSYPIFTEDWGADEELHLITGLAQHGMGNWKRISEHLGTRTKEDIEKHYESVYIDSPDWPLPRVDQHLSV
DPDEFQERKRRRIAEMSSVTAPTQKVAPTSAPGVHEVASFLPGRLEFEHENDNDAEDRVKDLEFGICLEWGGDQI
IEDEFDPDVQARLKIAEERNNGFLISGASITLPAGKGPPAPQTNGSINGHHVNGDVKRDVKSEDAAMANGSNGEE
EEVEEPTRPPPYETKDSLKFKLTLLEEYGQRVEKRHQDKALMFERGLLEYKKIQAADKKKGKEEREILHRLRPFA
RLQTAEDYESFSADILYEAILRKRIQELQHYRRLGLSTAADIDKYENDLSKRTQVKAQARDYDRSQYRSSGRQSS
GPDPRRSSLVSYCESDDRSREPTPRLPGTAPPVRRPPPPLNLANSPSLHLLTPAEQTLCSQLRILPKPYLVVKET
LVREYARRGGKLRRREARDLVKIDVNKTSRIWDFLVQAGFLKITTDTASHSAPAAASGPQDASLQSSATNGSPSK
SPRPPLPPAIASVSSASSSVNGSLYSSSQHVSQATWPPNPT*
Coding >AgabiH97|041640
ATGACGGTCACCCAGCGAAAGTCACAACACATCCCAGACGAAGTCCAAACTGTCAATGAACCCGGAGAGCAGTAC
GAGTGCGATGCGTGCGCATGTGACCTTACACACACTGTTCGAATCAAATGTGCCGATCCCGTATGCACCAATGAC
GAAGGCGTCGATATTTGCCCAGCATGCTTTTGTGCTGGGAAGGAGTTCAAGGACCACAAGAGGTGGCATTCCTAT
CGCGTCATTGAGTTGAATTCCTACCCCATCTTTACCGAAGACTGGGGTGCAGATGAGGAACTTCACTTAATTACT
GGGCTAGCTCAACATGGTATGGGCAATTGGAAAAGAATTTCTGAACATTTGGGTACGAGGACCAAGGAGGATATA
GAAAAACATTATGAGAGTGTCTACATCGACTCACCGGATTGGCCACTACCGCGAGTGGACCAGCATCTCTCTGTG
GACCCTGACGAATTTCAGGAGCGTAAACGACGTCGAATAGCAGAAATGAGCTCTGTTACCGCCCCAACACAAAAA
GTAGCACCAACTTCTGCTCCAGGTGTACATGAAGTCGCTTCTTTCCTGCCGGGTCGTCTAGAATTTGAGCACGAG
AATGATAACGATGCAGAAGATCGTGTCAAAGATTTGGAATTTGGAATCTGTTTGGAATGGGGAGGAGATCAGATT
ATTGAAGATGAGTTCGATCCTGATGTTCAGGCCCGTCTGAAGATAGCGGAAGAGCGCAATAATGGCTTCCTGATA
TCCGGTGCTTCAATAACACTGCCGGCAGGAAAGGGCCCACCTGCACCTCAAACCAATGGCTCTATCAATGGTCAC
CACGTCAATGGTGATGTCAAAAGAGACGTAAAATCAGAAGATGCGGCGATGGCTAATGGTAGCAATGGAGAGGAA
GAGGAGGTGGAAGAGCCAACACGACCTCCCCCTTATGAAACCAAGGATTCTCTGAAATTCAAATTGACACTTCTA
GAAGAATACGGCCAGCGAGTAGAGAAGCGGCATCAGGACAAAGCTCTCATGTTCGAACGTGGACTTTTGGAATAC
AAAAAGATACAAGCGGCCGACAAGAAAAAGGGAAAGGAAGAGCGCGAGATTCTGCATCGACTACGACCATTTGCG
AGGCTACAGACAGCTGAAGATTACGAATCATTTTCCGCGGATATCCTCTACGAGGCAATTTTACGAAAGCGTATT
CAAGAGCTTCAACACTACCGTCGTCTTGGGTTATCCACCGCTGCCGACATTGATAAATACGAAAATGACCTTTCT
AAGCGAACCCAGGTCAAGGCCCAAGCCCGTGATTACGACAGGTCACAGTATCGCAGTAGTGGAAGGCAATCCTCC
GGACCTGATCCTCGACGTTCTAGTCTTGTGTCCTACTGTGAATCAGACGACCGCTCTAGAGAGCCGACGCCACGT
TTACCAGGAACAGCTCCACCTGTCCGCCGCCCTCCACCTCCACTCAACCTCGCCAACAGTCCTTCATTGCATCTA
CTTACTCCCGCTGAACAAACCCTGTGCTCTCAACTTCGAATTCTTCCCAAGCCTTATCTTGTCGTCAAGGAAACA
CTTGTACGAGAGTACGCTCGAAGAGGAGGCAAACTTCGTCGGCGTGAAGCACGCGACCTGGTCAAGATTGATGTC
AATAAAACTAGTCGAATATGGGATTTTCTGGTGCAAGCAGGGTTCTTAAAGATTACCACCGATACTGCTAGCCAT
AGTGCGCCTGCAGCTGCCAGTGGTCCTCAAGATGCCAGTCTCCAATCCTCCGCTACCAACGGTTCTCCCTCAAAA
TCCCCTCGCCCGCCCCTGCCACCCGCCATTGCATCGGTCTCTTCAGCATCAAGCAGCGTGAACGGGTCATTGTAC
AGTTCATCGCAGCACGTATCACAAGCAACTTGGCCTCCAAATCCAACCTAA
Transcript >AgabiH97|041640
ATGACGGTCACCCAGCGAAAGTCACAACACATCCCAGACGAAGTCCAAACTGTCAATGAACCCGGAGAGCAGTAC
GAGTGCGATGCGTGCGCATGTGACCTTACACACACTGTTCGAATCAAATGTGCCGATCCCGTATGCACCAATGAC
GAAGGCGTCGATATTTGCCCAGCATGCTTTTGTGCTGGGAAGGAGTTCAAGGACCACAAGAGGTGGCATTCCTAT
CGCGTCATTGAGTTGAATTCCTACCCCATCTTTACCGAAGACTGGGGTGCAGATGAGGAACTTCACTTAATTACT
GGGCTAGCTCAACATGGTATGGGCAATTGGAAAAGAATTTCTGAACATTTGGGTACGAGGACCAAGGAGGATATA
GAAAAACATTATGAGAGTGTCTACATCGACTCACCGGATTGGCCACTACCGCGAGTGGACCAGCATCTCTCTGTG
GACCCTGACGAATTTCAGGAGCGTAAACGACGTCGAATAGCAGAAATGAGCTCTGTTACCGCCCCAACACAAAAA
GTAGCACCAACTTCTGCTCCAGGTGTACATGAAGTCGCTTCTTTCCTGCCGGGTCGTCTAGAATTTGAGCACGAG
AATGATAACGATGCAGAAGATCGTGTCAAAGATTTGGAATTTGGAATCTGTTTGGAATGGGGAGGAGATCAGATT
ATTGAAGATGAGTTCGATCCTGATGTTCAGGCCCGTCTGAAGATAGCGGAAGAGCGCAATAATGGCTTCCTGATA
TCCGGTGCTTCAATAACACTGCCGGCAGGAAAGGGCCCACCTGCACCTCAAACCAATGGCTCTATCAATGGTCAC
CACGTCAATGGTGATGTCAAAAGAGACGTAAAATCAGAAGATGCGGCGATGGCTAATGGTAGCAATGGAGAGGAA
GAGGAGGTGGAAGAGCCAACACGACCTCCCCCTTATGAAACCAAGGATTCTCTGAAATTCAAATTGACACTTCTA
GAAGAATACGGCCAGCGAGTAGAGAAGCGGCATCAGGACAAAGCTCTCATGTTCGAACGTGGACTTTTGGAATAC
AAAAAGATACAAGCGGCCGACAAGAAAAAGGGAAAGGAAGAGCGCGAGATTCTGCATCGACTACGACCATTTGCG
AGGCTACAGACAGCTGAAGATTACGAATCATTTTCCGCGGATATCCTCTACGAGGCAATTTTACGAAAGCGTATT
CAAGAGCTTCAACACTACCGTCGTCTTGGGTTATCCACCGCTGCCGACATTGATAAATACGAAAATGACCTTTCT
AAGCGAACCCAGGTCAAGGCCCAAGCCCGTGATTACGACAGGTCACAGTATCGCAGTAGTGGAAGGCAATCCTCC
GGACCTGATCCTCGACGTTCTAGTCTTGTGTCCTACTGTGAATCAGACGACCGCTCTAGAGAGCCGACGCCACGT
TTACCAGGAACAGCTCCACCTGTCCGCCGCCCTCCACCTCCACTCAACCTCGCCAACAGTCCTTCATTGCATCTA
CTTACTCCCGCTGAACAAACCCTGTGCTCTCAACTTCGAATTCTTCCCAAGCCTTATCTTGTCGTCAAGGAAACA
CTTGTACGAGAGTACGCTCGAAGAGGAGGCAAACTTCGTCGGCGTGAAGCACGCGACCTGGTCAAGATTGATGTC
AATAAAACTAGTCGAATATGGGATTTTCTGGTGCAAGCAGGGTTCTTAAAGATTACCACCGATACTGCTAGCCAT
AGTGCGCCTGCAGCTGCCAGTGGTCCTCAAGATGCCAGTCTCCAATCCTCCGCTACCAACGGTTCTCCCTCAAAA
TCCCCTCGCCCGCCCCTGCCACCCGCCATTGCATCGGTCTCTTCAGCATCAAGCAGCGTGAACGGGTCATTGTAC
AGTTCATCGCAGCACGTATCACAAGCAACTTGGCCTCCAAATCCAACCTAA
Gene >AgabiH97|041640
ATGACGGTCACCCAGCGAAAGTCACAACACATCCCAGACGAAGTCCAAAGTGATTTCTACGCCTTTCCTCTGTTG
TCCATGTCTACTAACCACGTCGCATGTTCCGCGTAGCTGTCAATGAACCCGGAGAGCAGTACGAGTGCGATGCGT
GCGCATGTGACCTTACACACACTGTTCGAATCAAATGTGCCGATCCCGTATGCACCAATGACGAAGGCGTCGATA
TTTGCCCAGCATGCTTTTGTGCTGGGAAGGAGTTCAAGGACCACAAGAGGTGGCATTCCTATCGCGTCATTGTGA
GTACGTCTAATTCAGGGAGGGCGATATATTTACCTTGGTACAGGAGTTGAATTCCTACCCCATCTTTACCGAAGA
CTGGGGTGCAGATGAGTGAGTCTCATCATCACGTTGCATGATGCAAAGCAATGACTCCGCATATAGGGAACTTCA
CTTAATTACTGGGCTAGCTCAACATGGTATGGGCAATTGGAAAAGAATTTCTGAACATTTGGGTACGAGGACCAA
GGAGGATATAGAAAAACATTATGAGAGTGTCTACATCGACTCACCGGATTGGCCACTACCGGTAAACATTTTTTA
CTTGCCCACATATATACGATAAAACTCATAGTTCTTTAGCGAGTGGACCAGCATCTCTCTGTGGACCCTGACGAA
TTTCAGGAGCGTAAACGACGTCGAATAGCAGAAATGAGCTCTGTTACCGCCCCAACACAAAAAGTAGCACCAACT
TCTGCTCCAGGTGTACATGAAGTCGCTTCTTTCCTGCCGGGTCGTCTAGAATTTGAGCACGAGAATGATAACGAT
GCAGAAGATCGTGTCAAAGATTTGGAATTTGGAATCTGTTTGGAATGGGGAGGAGATCAGATTATTGAAGATGAG
TTCGATCCTGATGTTCAGGCCCGTCTGAAGATAGCGGAAGAGCGCAATAATGGCTTCCTGATATCCGGTGCTTCA
ATAACACTGCCGGCAGGAAAGGGCCCACCTGCACCTCAAACCAATGGCTCTATCAATGGTCACCACGTCAATGGT
GATGTCAAAAGAGACGTAAAATCAGAAGATGCGGCGATGGCTAATGGTAGCAATGGAGAGGAAGAGGAGGTGGAA
GAGCCAACACGACCTCCCCCTTATGAAACCAAGGATTCTCTGAAATTCAAATTGACACTTCTAGAAGAATACGGC
CAGCGAGTAGAGAAGCGGCATCAGGACAAAGCTCTCATGTTCGAACGTGGACTTTTGGAATACAAAAAGGTGCCC
ATATCTCGTGATCATGTCCACTTCCGCCTCTGACGCGTTTCAGATACAAGCGGCCGACAAGAAAAAGGGAAAGGA
AGAGCGCGAGATTCTGCATCGACTACGACCATTTGCGAGGCTACAGACAGCTGAAGATTACGAATCATTTTCCGC
GGATATCCTCTGTGTGTATCTTCACACAACCATCTGCTGGAATATTCTGATATACTAGTCTATAGACGAGGCAAT
TTTACGAAAGCGTATTCAAGAGCTTCAACACTACCGTCGTCTTGGGTTATCCACCGCTGCCGACATTGATAAATA
CGAAAATGACCTTTCTAAGCGAGTGCGTATTTTGGCCGCTTTTTTCTCGCTCTATCTTGATCTCTGTGCCTCAGA
CCCAGGTCAAGGCCCAAGCCCGTGATTACGACAGGTCACAGTATCGCAGTAGTGGAAGGCAATCCTCCGGACCTG
ATCCTCGACGTTCTAGTCTTGTGTCCTACTGTGAATCAGACGACCGCTCTAGAGAGCCGACGCCACGTTTACCAG
GAACAGCTCCACCTGTCCGCCGCCCTCGTAAGTTAATGAATCGAGTAGTTTTCGTATATGCTCACTTTAGCGGCA
GCACCTCCACTCAACCTCGCCAACAGTCCTTCATTGCATCTACTTACTCCCGCTGAACAAACCCTGTGCTCTCAA
CTTCGAATTCTTCCCAAGCCTTATCTTGTCGTCAAGGAAACACTTGTACGAGAGTACGCTCGAAGAGGAGGCAAA
CTTCGTCGGCGTGAAGCACGCGACCTGGTCAAGATTGATGTCAATAAAACTAGTCGAATATGGGATTTTCTGGTG
CAAGCAGGGTTCTTAAAGATTACCACCGATACTGCTAGCCATAGTGCGCCTGCAGCTGCCAGTGGTCCTCAAGAT
GCCAGGTTTGTCTCGACTTACGCCATGTCCCCTCGCATTGCTCATCCGCTTATATTTCTCAGTCTCCAATCCTCC
GCTACCAACGGTTCTCCCTCAAAATCCCCTCGCCCGCCCCTGCCACCCGCCATTGCATCGGTCTCTTCAGCATCA
AGCAGCGTGAACGGGTCATTGTACAGTTCATCGCAGCACGTATCACAAGCAACTTGGCCTCCAAATCCAACCTAA

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