Protein ID | AgabiH97|041050 |
Gene name | |
Location | scaffold_2:669216..672658 |
Strand | - |
Gene length (bp) | 3442 |
Transcript length (bp) | 2742 |
Coding sequence length (bp) | 2742 |
Protein length (aa) | 914 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF01713 | Smr | Smr domain | 6.8E-11 | 410 | 483 |
PF08590 | DUF1771 | Domain of unknown function (DUF1771) | 2.2E-08 | 339 | 402 |
Swissprot ID | Swissprot Description | Start | End | E-value |
---|---|---|---|---|
sp|Q08954|YP199_YEAST | Smr domain-containing protein YPL199C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YPL199C PE=1 SV=1 | 338 | 536 | 8.0E-17 |
sp|Q9UTP4|YLL3_SCHPO | Smr domain-containing protein C11H11.03c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC11H11.03c PE=3 SV=1 | 338 | 520 | 7.0E-13 |
sp|Q08954|YP199_YEAST | Smr domain-containing protein YPL199C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YPL199C PE=1 SV=1 | 569 | 715 | 6.0E-06 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
Yes | 1 - 19 | 0.45 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >AgabiH97|041050 MLDIILCLLLVLWLVAEALSDKKPRSERSLLPQHHDGVRYTAPLHNGEQRSVSEHQRQSTPSSRALYVHQGQERI SPPQHRDGVPNTVPQQRQSAPIARALYVHQEQERISPPQHRDGVTNTVPLQRQSAPPTRALRVHQEHERVSPPRH RDGVTNAVPDQRRDVPQRGQYVHQEQERIFLSNLLRAVQLGAQGSSDECSGSEPPPLPQPHDNVRCTATLHDVEQ RSVSEHQLQSAPPPRAQNVQHERVSSPEPLQAVQLSTPAVPQGQDQTPLQTAPQHVNEPEQNSVLIPPATVSPTE PKLEAAQTYQATEAALATEAGGEVPQHPQDDADEGSGDYDRLRERAKQEIKAIQKYRKEKQQAKASGQFKLVAEL AEEIKKHRQRRQLFDEQASHLIFAKNNKNRSPNQVDLHGLTAKEATTHAKRAIQEARERGVVQLRLIVGKGLHSS GPPVLKPCMLKLMQELKLPAEVHPSNEGVLVVQIVPSSTASPLATVHQSVLQPSLLITSQPEPSPLVPHIDASPG EPDQWAHNLSRELVWYGQEISQRFQNSAHHNVEDGNGDGIILREYARQERQMKLNYRKEKKLAKAGGQLVLAREL AEKENEHRNRCDMFNAQASELIFAQNNKHGSLDWVVLHDLKAKEAKVHTKRVIEEARAKGIIKICLVVGEQSSSG ALKPAMLKFLRKKRELSVEVNPLYAGVLVVQLVSMSTESPPAVWDQTLLQAPLSQTSQPASSPIVISHIDAPPDR LTGDSSRGLAQNCEVTSTPLVPVGGEELPEVPQIAAHRDAKDGNTDFMMLREYARQEKQKQLNCRMEKKRARAGG QMALAMELAKQENEHQILRDLYDATASQLIFSKNNENGSLDKVVLRDLKDKEAMTHARRVIQEAREKGKTEICLV KIVWALSGKGRQR* |
Coding | >AgabiH97|041050 ATGCTTGACATCATATTATGCTTGCTCCTGGTACTATGGCTGGTCGCTGAGGCTTTGAGCGATAAAAAGCCCAGA TCCGAACGGTCACTTCTTCCTCAGCATCACGATGGTGTTCGTTACACTGCACCGCTACATAATGGGGAACAGCGA TCAGTGAGCGAACATCAACGCCAGAGCACTCCTTCCTCAAGGGCGCTATATGTGCATCAAGGGCAAGAACGAATC TCTCCTCCTCAACATCGTGACGGTGTACCAAACACTGTCCCCCAACAACGCCAGAGCGCTCCTATCGCAAGGGCG CTGTATGTACACCAAGAGCAAGAACGAATCTCTCCTCCTCAACATCGCGACGGTGTAACAAACACCGTCCCCTTA CAACGCCAGAGTGCTCCTCCGACAAGGGCGCTACGTGTACATCAAGAACACGAGCGAGTCTCTCCTCCTCGACAT CGCGATGGTGTAACGAACGCTGTCCCAGATCAACGTCGGGATGTTCCTCAAAGGGGGCAATATGTACATCAGGAG CAAGAGCGAATCTTTCTTTCCAATCTTCTTCGAGCTGTCCAGCTGGGGGCTCAAGGCTCGAGCGACGAATGTTCC GGTTCCGAACCGCCACCCCTTCCTCAACCTCACGACAATGTCCGTTGCACTGCAACATTACATGATGTAGAGCAG CGATCCGTAAGCGAACATCAATTGCAGAGCGCTCCTCCCCCAAGGGCGCAAAATGTACAGCATGAACGAGTCTCT TCTCCAGAACCTCTTCAAGCTGTCCAGCTCTCCACTCCTGCAGTTCCTCAGGGACAGGATCAGACGCCTCTCCAA ACTGCACCGCAGCATGTAAACGAACCGGAACAGAATTCTGTTCTTATTCCCCCGGCTACTGTGTCTCCCACCGAG CCCAAACTAGAGGCAGCTCAGACCTATCAAGCTACAGAGGCAGCTCTTGCAACCGAAGCCGGGGGAGAAGTGCCC CAGCACCCTCAAGATGATGCGGATGAAGGAAGCGGTGACTATGACAGGCTCAGAGAACGTGCAAAGCAGGAGATA AAAGCGATACAGAAGTATCGCAAAGAGAAGCAACAAGCCAAAGCCAGTGGTCAATTCAAGTTGGTCGCAGAACTT GCCGAAGAAATCAAGAAACACAGACAGCGCCGGCAATTATTCGATGAACAAGCCAGTCATTTGATCTTTGCGAAA AATAACAAGAATCGCTCACCGAACCAGGTCGACTTACACGGCCTTACGGCAAAGGAAGCAACCACTCACGCAAAG CGTGCAATTCAGGAGGCCCGTGAAAGAGGCGTCGTCCAATTGCGCCTCATCGTTGGCAAGGGACTTCATTCATCA GGACCACCTGTACTCAAACCCTGCATGCTGAAGCTTATGCAAGAGCTTAAACTTCCTGCGGAAGTTCATCCTTCG AATGAAGGTGTACTAGTCGTTCAAATCGTTCCTTCGAGTACTGCGTCTCCTCTGGCGACAGTTCATCAATCGGTT TTGCAGCCCTCCTTGTTAATCACAAGCCAACCGGAACCAAGTCCTCTTGTTCCTCATATTGATGCGTCTCCCGGC GAACCTGATCAATGGGCTCACAATTTATCTCGAGAGCTTGTTTGGTATGGTCAAGAAATCTCACAGCGCTTCCAA AACTCAGCTCATCATAATGTGGAAGATGGAAATGGTGATGGTATCATACTTCGTGAATATGCAAGGCAAGAGAGA CAAATGAAGTTGAATTACCGCAAGGAGAAAAAGCTAGCCAAAGCCGGGGGTCAATTGGTGCTTGCCAGAGAACTG GCTGAGAAAGAGAATGAACACAGAAATCGCTGTGATATGTTCAATGCGCAAGCGAGCGAGCTAATTTTTGCCCAA AATAATAAGCATGGCTCATTGGACTGGGTCGTCTTGCACGACCTCAAGGCAAAGGAAGCGAAAGTTCACACGAAG CGCGTTATCGAAGAGGCTCGTGCGAAAGGCATTATCAAAATATGCCTGGTTGTTGGTGAACAAAGTTCATCAGGT GCGCTCAAGCCCGCTATGCTCAAATTTTTGAGAAAAAAGCGTGAGCTCTCAGTGGAAGTTAATCCTTTATATGCA GGTGTACTGGTCGTTCAACTCGTTTCCATGAGTACTGAGTCTCCTCCTGCGGTTTGGGACCAAACGCTTTTGCAG GCCCCCTTATCGCAGACAAGTCAACCGGCATCGAGTCCTATTGTTATTTCCCATATTGATGCGCCTCCTGATCGA CTGACCGGTGATTCATCTCGAGGCCTTGCACAGAACTGTGAGGTCACATCGACACCTCTTGTTCCTGTTGGTGGT GAAGAGCTGCCAGAAGTTCCCCAAATCGCAGCTCATCGTGATGCGAAAGATGGGAACACTGATTTTATGATGCTC CGGGAATATGCAAGGCAAGAGAAACAAAAGCAGTTGAATTGCCGTATGGAGAAGAAGCGAGCCCGAGCCGGAGGC CAGATGGCGCTTGCCATGGAACTGGCTAAGCAAGAGAATGAACATCAAATTCTCCGTGACCTGTACGACGCAACA GCGAGCCAGCTAATTTTTTCCAAAAATAATGAGAACGGCTCCTTGGACAAGGTCGTCCTGCGCGACCTCAAGGAT AAGGAAGCCATGACCCATGCAAGGCGTGTTATTCAAGAGGCTCGTGAGAAGGGCAAAACCGAGATATGCCTGGTT AAAATAGTGTGGGCTCTCAGCGGAAAAGGACGCCAAAGATAA |
Transcript | >AgabiH97|041050 ATGCTTGACATCATATTATGCTTGCTCCTGGTACTATGGCTGGTCGCTGAGGCTTTGAGCGATAAAAAGCCCAGA TCCGAACGGTCACTTCTTCCTCAGCATCACGATGGTGTTCGTTACACTGCACCGCTACATAATGGGGAACAGCGA TCAGTGAGCGAACATCAACGCCAGAGCACTCCTTCCTCAAGGGCGCTATATGTGCATCAAGGGCAAGAACGAATC TCTCCTCCTCAACATCGTGACGGTGTACCAAACACTGTCCCCCAACAACGCCAGAGCGCTCCTATCGCAAGGGCG CTGTATGTACACCAAGAGCAAGAACGAATCTCTCCTCCTCAACATCGCGACGGTGTAACAAACACCGTCCCCTTA CAACGCCAGAGTGCTCCTCCGACAAGGGCGCTACGTGTACATCAAGAACACGAGCGAGTCTCTCCTCCTCGACAT CGCGATGGTGTAACGAACGCTGTCCCAGATCAACGTCGGGATGTTCCTCAAAGGGGGCAATATGTACATCAGGAG CAAGAGCGAATCTTTCTTTCCAATCTTCTTCGAGCTGTCCAGCTGGGGGCTCAAGGCTCGAGCGACGAATGTTCC GGTTCCGAACCGCCACCCCTTCCTCAACCTCACGACAATGTCCGTTGCACTGCAACATTACATGATGTAGAGCAG CGATCCGTAAGCGAACATCAATTGCAGAGCGCTCCTCCCCCAAGGGCGCAAAATGTACAGCATGAACGAGTCTCT TCTCCAGAACCTCTTCAAGCTGTCCAGCTCTCCACTCCTGCAGTTCCTCAGGGACAGGATCAGACGCCTCTCCAA ACTGCACCGCAGCATGTAAACGAACCGGAACAGAATTCTGTTCTTATTCCCCCGGCTACTGTGTCTCCCACCGAG CCCAAACTAGAGGCAGCTCAGACCTATCAAGCTACAGAGGCAGCTCTTGCAACCGAAGCCGGGGGAGAAGTGCCC CAGCACCCTCAAGATGATGCGGATGAAGGAAGCGGTGACTATGACAGGCTCAGAGAACGTGCAAAGCAGGAGATA AAAGCGATACAGAAGTATCGCAAAGAGAAGCAACAAGCCAAAGCCAGTGGTCAATTCAAGTTGGTCGCAGAACTT GCCGAAGAAATCAAGAAACACAGACAGCGCCGGCAATTATTCGATGAACAAGCCAGTCATTTGATCTTTGCGAAA AATAACAAGAATCGCTCACCGAACCAGGTCGACTTACACGGCCTTACGGCAAAGGAAGCAACCACTCACGCAAAG CGTGCAATTCAGGAGGCCCGTGAAAGAGGCGTCGTCCAATTGCGCCTCATCGTTGGCAAGGGACTTCATTCATCA GGACCACCTGTACTCAAACCCTGCATGCTGAAGCTTATGCAAGAGCTTAAACTTCCTGCGGAAGTTCATCCTTCG AATGAAGGTGTACTAGTCGTTCAAATCGTTCCTTCGAGTACTGCGTCTCCTCTGGCGACAGTTCATCAATCGGTT TTGCAGCCCTCCTTGTTAATCACAAGCCAACCGGAACCAAGTCCTCTTGTTCCTCATATTGATGCGTCTCCCGGC GAACCTGATCAATGGGCTCACAATTTATCTCGAGAGCTTGTTTGGTATGGTCAAGAAATCTCACAGCGCTTCCAA AACTCAGCTCATCATAATGTGGAAGATGGAAATGGTGATGGTATCATACTTCGTGAATATGCAAGGCAAGAGAGA CAAATGAAGTTGAATTACCGCAAGGAGAAAAAGCTAGCCAAAGCCGGGGGTCAATTGGTGCTTGCCAGAGAACTG GCTGAGAAAGAGAATGAACACAGAAATCGCTGTGATATGTTCAATGCGCAAGCGAGCGAGCTAATTTTTGCCCAA AATAATAAGCATGGCTCATTGGACTGGGTCGTCTTGCACGACCTCAAGGCAAAGGAAGCGAAAGTTCACACGAAG CGCGTTATCGAAGAGGCTCGTGCGAAAGGCATTATCAAAATATGCCTGGTTGTTGGTGAACAAAGTTCATCAGGT GCGCTCAAGCCCGCTATGCTCAAATTTTTGAGAAAAAAGCGTGAGCTCTCAGTGGAAGTTAATCCTTTATATGCA GGTGTACTGGTCGTTCAACTCGTTTCCATGAGTACTGAGTCTCCTCCTGCGGTTTGGGACCAAACGCTTTTGCAG GCCCCCTTATCGCAGACAAGTCAACCGGCATCGAGTCCTATTGTTATTTCCCATATTGATGCGCCTCCTGATCGA CTGACCGGTGATTCATCTCGAGGCCTTGCACAGAACTGTGAGGTCACATCGACACCTCTTGTTCCTGTTGGTGGT GAAGAGCTGCCAGAAGTTCCCCAAATCGCAGCTCATCGTGATGCGAAAGATGGGAACACTGATTTTATGATGCTC CGGGAATATGCAAGGCAAGAGAAACAAAAGCAGTTGAATTGCCGTATGGAGAAGAAGCGAGCCCGAGCCGGAGGC CAGATGGCGCTTGCCATGGAACTGGCTAAGCAAGAGAATGAACATCAAATTCTCCGTGACCTGTACGACGCAACA GCGAGCCAGCTAATTTTTTCCAAAAATAATGAGAACGGCTCCTTGGACAAGGTCGTCCTGCGCGACCTCAAGGAT AAGGAAGCCATGACCCATGCAAGGCGTGTTATTCAAGAGGCTCGTGAGAAGGGCAAAACCGAGATATGCCTGGTT AAAATAGTGTGGGCTCTCAGCGGAAAAGGACGCCAAAGATAA |
Gene | >AgabiH97|041050 ATGCTTGACATCATATTATGCTTGCTCCTGGTACTATGGCTGGTCGCTGAGGCTTTGAGCGATAAAAAGCCCAGA TCCGAACGGTCACTTCTTCCTCAGCATCACGATGGTGTTCGTTACACTGCACCGCTACATAATGGGGAACAGCGA TCAGTGAGCGAACATCAACGCCAGAGCACTCCTTCCTCAAGGGCGCTATATGTGCATCAAGGGCAAGAACGAATC TCTCCTCCTCAACATCGTGACGGTGTACCAAACACTGTCCCCCAACAACGCCAGAGCGCTCCTATCGCAAGGGCG CTGTATGTACACCAAGAGCAAGAACGAATCTCTCCTCCTCAACATCGCGACGGTGTAACAAACACCGTCCCCTTA CAACGCCAGAGTGCTCCTCCGACAAGGGCGCTACGTGTACATCAAGAACACGAGCGAGTCTCTCCTCCTCGACAT CGCGATGGTGTAACGAACGCTGTCCCAGATCAACGTCGGGATGTTCCTCAAAGGGGGCAATATGTACATCAGGAG CAAGAGCGAATCTTTCTTTCCAATCTTCTTCGAGCTGTCCAGCTGGGGGCTCAAGGCTCGAGCGACGAATGTTCC GGTTCCGAACCGCCACCCCTTCCTCAACCTCACGACAATGTCCGTTGCACTGCAACATTACATGATGTAGAGCAG CGATCCGTAAGCGAACATCAATTGCAGAGCGCTCCTCCCCCAAGGGCGCAAAATGTACAGCATGAACGAGTCTCT TCTCCAGAACCTCTTCAAGCTGTCCAGCTCTCCACTCCTGCAGTTCCTCAGGGACAGGATCAGACGCCTCTCCAA ACTGCACCGCAGCATGTAAACGAACCGGAACAGAATTCTGTTCTTATTCCCCCGGCTACTGTGTCTCCCACCGAG CCCAAACTAGAGGCAGCTCAGACCTATCAAGCTACAGAGGCAGCTCTTGCAACCGAAGCCGGGGGAGAAGTGCCC CAGCACCCTCAAGTGAGCACACTCAGTCTCTTCCACAAAACAATGATTGTTAATCTTCGTCCAGGATGATGCGGA TGAAGGAAGCGGTGACTATGACAGGCTCAGAGAACGTGCAAAGCAGGAGATAAAAGCGATACAGAAGTATCGCAA AGAGAAGCAACAAGCCAAAGCCAGTGGTCAATTCAAGTTGGTCGCAGAACTTGCCGAAGAAATCAAGAAACACAG ACAGCGCCGGCAATTATTCGATGAACAAGCCAGTCATTTGATCTTTGCGAGTAAGCGAACAATTATCCGTTGAAG ATTAGAATACTGATACATGTCATTTCAGAAAATAACAAGGTTCGTTCAAAACTTGTATCATGACACTACGTGAAT AACAAGTCCTTGTGGCAGAATCGCTCACCGAACCAGGTCGACTTACACGGCCTTACGGCAAAGGAAGCAACCACT CACGCAAAGCGTGCAATTCAGGAGGCCCGTGAAAGAGGCGTCGTCCAATTGCGCCTCATCGTTGGCAAGGGACTT CATTCATCAGGACCACCTGTACTCAAACCCTGCATGCTGAAGCTTATGCAAGAGTAAGCATCGTGATATCTACAA ATCTAATCTTATTAACTGTGGTGTAGGCTTAAACTTCCTGCGGAAGTTCATCCTTCGAATGAAGGTGTACTAGTC GTTCAAATCGTTCCTTCGAGTACTGCGTCTCCTCTGGCGACAGTTCATCAATCGGTTTTGCAGCCCTCCTTGTTA ATCACAAGCCAACCGGAACCAAGTCCTCTTGTTCCTCATATTGATGCGTCTCCCGGCGAACCTGATCAATGGGCT CACAATTTATCTCGAGAGCTTGTTTGGTATGGTCAAGAAATCTCACAGCGCTTCCAAGTAGGCATCCTTTACTGT ATAAGAGGTGGTTCTCATTGACCGATCTTTCCCCCTAGAACTCAGCTCATCATAATGTGGAAGATGGAAATGGTG ATGGTATCATACTTCGTGAATATGCAAGGCAAGAGAGACAAATGAAGTTGAATTACCGCAAGGAGAAAAAGCTAG CCAAAGCCGGGGGTCAATTGGTGCTTGCCAGAGAACTGGCTGAGAAAGAGAATGAACACAGAAATCGCTGTGATA TGTTCAATGCGCAAGCGAGCGAGCTAATTTTTGCCCGTACGTGCTTCTTTTTCCTTTTCTCTTGTCGAACGATTC ATCACTGATAAAATTTTGATTCCGTCAGAAAATAATAAGGTTCGTTGGTATTCAATATCTGATCTTGACCCTGTG TAACCACGAAAACCCGTGTCATAGCATGGCTCATTGGACTGGGTCGTCTTGCACGACCTCAAGGCAAAGGAAGCG AAAGTTCACACGAAGCGCGTTATCGAAGAGGCTCGTGCGAAAGGCATTATCAAAATATGCCTGGTTGTTGGTGAA CAAAGTTCATCAGGTGCGCTCAAGCCCGCTATGCTCAAATTTTTGAGAAAAAAGTAAGTGTTGTGATGCTTACGA CTGCAATTTTTCATTTACCTTTTTACAGGCGTGAGCTCTCAGTGGAAGTTAATCCTTTATATGCAGGTGTACTGG TCGTTCAACTCGTTTCCATGAGTACTGAGTCTCCTCCTGCGGTTTGGGACCAAACGCTTTTGCAGGCCCCCTTAT CGCAGACAAGTCAACCGGCATCGAGTCCTATTGTTATTTCCCATATTGATGCGCCTCCTGATCGACTGACCGGTG ATTCATCTCGAGGCCTTGCACAGAACTGTGAGGTCACATCGACACCTCTTGTTCCTGTTGGTGGTGAAGAGCTGC CAGAAGTTCCCCAAGTGAGCATCCGCTTCTGCGTAAGGGCTTGTTCTCGTTGACCCTCCCTTTAGATCGCAGCTC ATCGTGATGCGAAAGATGGGAACACTGATTTTATGATGCTCCGGGAATATGCAAGGCAAGAGAAACAAAAGCAGT TGAATTGCCGTATGGAGAAGAAGCGAGCCCGAGCCGGAGGCCAGATGGCGCTTGCCATGGAACTGGCTAAGCAAG AGAATGAACATCAAATTCTCCGTGACCTGTACGACGCAACAGCGAGCCAGCTAATTTTTTCCAGTACGTTCTTCT TTTTCTCATGGAATGGTTCAACACTGATAGGTTTTTGTTTCGTCAGAAAATAATGAGGTTCGTTGGTATTCACGG TCCGGTCATGATCCTGCGTCAACGAAAGTCTTTGTCATAGAACGGCTCCTTGGACAAGGTCGTCCTGCGCGACCT CAAGGATAAGGAAGCCATGACCCATGCAAGGCGTGTTATTCAAGAGGCTCGTGAGAAGGGCAAAACCGAGATATG CCTGGTTGTTGGTGGACTTTGTTCACCAAGTTTTATGCTCAAATTCCTAAGAAAATAGTGAGTGTTGTGATGCAT ACAACTGCCATTTTTGATTTGGCTTTCATAGGTGTGGGCTCTCAGCGGAAAAGGACGCCAAAGATAA |