Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabiH97|041050
Gene name
Locationscaffold_2:669216..672658
Strand-
Gene length (bp)3442
Transcript length (bp)2742
Coding sequence length (bp)2742
Protein length (aa) 914

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF01713 Smr Smr domain 6.8E-11 410 483
PF08590 DUF1771 Domain of unknown function (DUF1771) 2.2E-08 339 402

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|Q08954|YP199_YEAST Smr domain-containing protein YPL199C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YPL199C PE=1 SV=1 338 536 8.0E-17
sp|Q9UTP4|YLL3_SCHPO Smr domain-containing protein C11H11.03c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC11H11.03c PE=3 SV=1 338 520 7.0E-13
sp|Q08954|YP199_YEAST Smr domain-containing protein YPL199C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YPL199C PE=1 SV=1 569 715 6.0E-06

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 19 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Developmental stages of Agaricus bisporus (strain A15). Published in Pelkmans et al, Applied Microbiology and Biotechnology, 2016

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >AgabiH97|041050
MLDIILCLLLVLWLVAEALSDKKPRSERSLLPQHHDGVRYTAPLHNGEQRSVSEHQRQSTPSSRALYVHQGQERI
SPPQHRDGVPNTVPQQRQSAPIARALYVHQEQERISPPQHRDGVTNTVPLQRQSAPPTRALRVHQEHERVSPPRH
RDGVTNAVPDQRRDVPQRGQYVHQEQERIFLSNLLRAVQLGAQGSSDECSGSEPPPLPQPHDNVRCTATLHDVEQ
RSVSEHQLQSAPPPRAQNVQHERVSSPEPLQAVQLSTPAVPQGQDQTPLQTAPQHVNEPEQNSVLIPPATVSPTE
PKLEAAQTYQATEAALATEAGGEVPQHPQDDADEGSGDYDRLRERAKQEIKAIQKYRKEKQQAKASGQFKLVAEL
AEEIKKHRQRRQLFDEQASHLIFAKNNKNRSPNQVDLHGLTAKEATTHAKRAIQEARERGVVQLRLIVGKGLHSS
GPPVLKPCMLKLMQELKLPAEVHPSNEGVLVVQIVPSSTASPLATVHQSVLQPSLLITSQPEPSPLVPHIDASPG
EPDQWAHNLSRELVWYGQEISQRFQNSAHHNVEDGNGDGIILREYARQERQMKLNYRKEKKLAKAGGQLVLAREL
AEKENEHRNRCDMFNAQASELIFAQNNKHGSLDWVVLHDLKAKEAKVHTKRVIEEARAKGIIKICLVVGEQSSSG
ALKPAMLKFLRKKRELSVEVNPLYAGVLVVQLVSMSTESPPAVWDQTLLQAPLSQTSQPASSPIVISHIDAPPDR
LTGDSSRGLAQNCEVTSTPLVPVGGEELPEVPQIAAHRDAKDGNTDFMMLREYARQEKQKQLNCRMEKKRARAGG
QMALAMELAKQENEHQILRDLYDATASQLIFSKNNENGSLDKVVLRDLKDKEAMTHARRVIQEAREKGKTEICLV
KIVWALSGKGRQR*
Coding >AgabiH97|041050
ATGCTTGACATCATATTATGCTTGCTCCTGGTACTATGGCTGGTCGCTGAGGCTTTGAGCGATAAAAAGCCCAGA
TCCGAACGGTCACTTCTTCCTCAGCATCACGATGGTGTTCGTTACACTGCACCGCTACATAATGGGGAACAGCGA
TCAGTGAGCGAACATCAACGCCAGAGCACTCCTTCCTCAAGGGCGCTATATGTGCATCAAGGGCAAGAACGAATC
TCTCCTCCTCAACATCGTGACGGTGTACCAAACACTGTCCCCCAACAACGCCAGAGCGCTCCTATCGCAAGGGCG
CTGTATGTACACCAAGAGCAAGAACGAATCTCTCCTCCTCAACATCGCGACGGTGTAACAAACACCGTCCCCTTA
CAACGCCAGAGTGCTCCTCCGACAAGGGCGCTACGTGTACATCAAGAACACGAGCGAGTCTCTCCTCCTCGACAT
CGCGATGGTGTAACGAACGCTGTCCCAGATCAACGTCGGGATGTTCCTCAAAGGGGGCAATATGTACATCAGGAG
CAAGAGCGAATCTTTCTTTCCAATCTTCTTCGAGCTGTCCAGCTGGGGGCTCAAGGCTCGAGCGACGAATGTTCC
GGTTCCGAACCGCCACCCCTTCCTCAACCTCACGACAATGTCCGTTGCACTGCAACATTACATGATGTAGAGCAG
CGATCCGTAAGCGAACATCAATTGCAGAGCGCTCCTCCCCCAAGGGCGCAAAATGTACAGCATGAACGAGTCTCT
TCTCCAGAACCTCTTCAAGCTGTCCAGCTCTCCACTCCTGCAGTTCCTCAGGGACAGGATCAGACGCCTCTCCAA
ACTGCACCGCAGCATGTAAACGAACCGGAACAGAATTCTGTTCTTATTCCCCCGGCTACTGTGTCTCCCACCGAG
CCCAAACTAGAGGCAGCTCAGACCTATCAAGCTACAGAGGCAGCTCTTGCAACCGAAGCCGGGGGAGAAGTGCCC
CAGCACCCTCAAGATGATGCGGATGAAGGAAGCGGTGACTATGACAGGCTCAGAGAACGTGCAAAGCAGGAGATA
AAAGCGATACAGAAGTATCGCAAAGAGAAGCAACAAGCCAAAGCCAGTGGTCAATTCAAGTTGGTCGCAGAACTT
GCCGAAGAAATCAAGAAACACAGACAGCGCCGGCAATTATTCGATGAACAAGCCAGTCATTTGATCTTTGCGAAA
AATAACAAGAATCGCTCACCGAACCAGGTCGACTTACACGGCCTTACGGCAAAGGAAGCAACCACTCACGCAAAG
CGTGCAATTCAGGAGGCCCGTGAAAGAGGCGTCGTCCAATTGCGCCTCATCGTTGGCAAGGGACTTCATTCATCA
GGACCACCTGTACTCAAACCCTGCATGCTGAAGCTTATGCAAGAGCTTAAACTTCCTGCGGAAGTTCATCCTTCG
AATGAAGGTGTACTAGTCGTTCAAATCGTTCCTTCGAGTACTGCGTCTCCTCTGGCGACAGTTCATCAATCGGTT
TTGCAGCCCTCCTTGTTAATCACAAGCCAACCGGAACCAAGTCCTCTTGTTCCTCATATTGATGCGTCTCCCGGC
GAACCTGATCAATGGGCTCACAATTTATCTCGAGAGCTTGTTTGGTATGGTCAAGAAATCTCACAGCGCTTCCAA
AACTCAGCTCATCATAATGTGGAAGATGGAAATGGTGATGGTATCATACTTCGTGAATATGCAAGGCAAGAGAGA
CAAATGAAGTTGAATTACCGCAAGGAGAAAAAGCTAGCCAAAGCCGGGGGTCAATTGGTGCTTGCCAGAGAACTG
GCTGAGAAAGAGAATGAACACAGAAATCGCTGTGATATGTTCAATGCGCAAGCGAGCGAGCTAATTTTTGCCCAA
AATAATAAGCATGGCTCATTGGACTGGGTCGTCTTGCACGACCTCAAGGCAAAGGAAGCGAAAGTTCACACGAAG
CGCGTTATCGAAGAGGCTCGTGCGAAAGGCATTATCAAAATATGCCTGGTTGTTGGTGAACAAAGTTCATCAGGT
GCGCTCAAGCCCGCTATGCTCAAATTTTTGAGAAAAAAGCGTGAGCTCTCAGTGGAAGTTAATCCTTTATATGCA
GGTGTACTGGTCGTTCAACTCGTTTCCATGAGTACTGAGTCTCCTCCTGCGGTTTGGGACCAAACGCTTTTGCAG
GCCCCCTTATCGCAGACAAGTCAACCGGCATCGAGTCCTATTGTTATTTCCCATATTGATGCGCCTCCTGATCGA
CTGACCGGTGATTCATCTCGAGGCCTTGCACAGAACTGTGAGGTCACATCGACACCTCTTGTTCCTGTTGGTGGT
GAAGAGCTGCCAGAAGTTCCCCAAATCGCAGCTCATCGTGATGCGAAAGATGGGAACACTGATTTTATGATGCTC
CGGGAATATGCAAGGCAAGAGAAACAAAAGCAGTTGAATTGCCGTATGGAGAAGAAGCGAGCCCGAGCCGGAGGC
CAGATGGCGCTTGCCATGGAACTGGCTAAGCAAGAGAATGAACATCAAATTCTCCGTGACCTGTACGACGCAACA
GCGAGCCAGCTAATTTTTTCCAAAAATAATGAGAACGGCTCCTTGGACAAGGTCGTCCTGCGCGACCTCAAGGAT
AAGGAAGCCATGACCCATGCAAGGCGTGTTATTCAAGAGGCTCGTGAGAAGGGCAAAACCGAGATATGCCTGGTT
AAAATAGTGTGGGCTCTCAGCGGAAAAGGACGCCAAAGATAA
Transcript >AgabiH97|041050
ATGCTTGACATCATATTATGCTTGCTCCTGGTACTATGGCTGGTCGCTGAGGCTTTGAGCGATAAAAAGCCCAGA
TCCGAACGGTCACTTCTTCCTCAGCATCACGATGGTGTTCGTTACACTGCACCGCTACATAATGGGGAACAGCGA
TCAGTGAGCGAACATCAACGCCAGAGCACTCCTTCCTCAAGGGCGCTATATGTGCATCAAGGGCAAGAACGAATC
TCTCCTCCTCAACATCGTGACGGTGTACCAAACACTGTCCCCCAACAACGCCAGAGCGCTCCTATCGCAAGGGCG
CTGTATGTACACCAAGAGCAAGAACGAATCTCTCCTCCTCAACATCGCGACGGTGTAACAAACACCGTCCCCTTA
CAACGCCAGAGTGCTCCTCCGACAAGGGCGCTACGTGTACATCAAGAACACGAGCGAGTCTCTCCTCCTCGACAT
CGCGATGGTGTAACGAACGCTGTCCCAGATCAACGTCGGGATGTTCCTCAAAGGGGGCAATATGTACATCAGGAG
CAAGAGCGAATCTTTCTTTCCAATCTTCTTCGAGCTGTCCAGCTGGGGGCTCAAGGCTCGAGCGACGAATGTTCC
GGTTCCGAACCGCCACCCCTTCCTCAACCTCACGACAATGTCCGTTGCACTGCAACATTACATGATGTAGAGCAG
CGATCCGTAAGCGAACATCAATTGCAGAGCGCTCCTCCCCCAAGGGCGCAAAATGTACAGCATGAACGAGTCTCT
TCTCCAGAACCTCTTCAAGCTGTCCAGCTCTCCACTCCTGCAGTTCCTCAGGGACAGGATCAGACGCCTCTCCAA
ACTGCACCGCAGCATGTAAACGAACCGGAACAGAATTCTGTTCTTATTCCCCCGGCTACTGTGTCTCCCACCGAG
CCCAAACTAGAGGCAGCTCAGACCTATCAAGCTACAGAGGCAGCTCTTGCAACCGAAGCCGGGGGAGAAGTGCCC
CAGCACCCTCAAGATGATGCGGATGAAGGAAGCGGTGACTATGACAGGCTCAGAGAACGTGCAAAGCAGGAGATA
AAAGCGATACAGAAGTATCGCAAAGAGAAGCAACAAGCCAAAGCCAGTGGTCAATTCAAGTTGGTCGCAGAACTT
GCCGAAGAAATCAAGAAACACAGACAGCGCCGGCAATTATTCGATGAACAAGCCAGTCATTTGATCTTTGCGAAA
AATAACAAGAATCGCTCACCGAACCAGGTCGACTTACACGGCCTTACGGCAAAGGAAGCAACCACTCACGCAAAG
CGTGCAATTCAGGAGGCCCGTGAAAGAGGCGTCGTCCAATTGCGCCTCATCGTTGGCAAGGGACTTCATTCATCA
GGACCACCTGTACTCAAACCCTGCATGCTGAAGCTTATGCAAGAGCTTAAACTTCCTGCGGAAGTTCATCCTTCG
AATGAAGGTGTACTAGTCGTTCAAATCGTTCCTTCGAGTACTGCGTCTCCTCTGGCGACAGTTCATCAATCGGTT
TTGCAGCCCTCCTTGTTAATCACAAGCCAACCGGAACCAAGTCCTCTTGTTCCTCATATTGATGCGTCTCCCGGC
GAACCTGATCAATGGGCTCACAATTTATCTCGAGAGCTTGTTTGGTATGGTCAAGAAATCTCACAGCGCTTCCAA
AACTCAGCTCATCATAATGTGGAAGATGGAAATGGTGATGGTATCATACTTCGTGAATATGCAAGGCAAGAGAGA
CAAATGAAGTTGAATTACCGCAAGGAGAAAAAGCTAGCCAAAGCCGGGGGTCAATTGGTGCTTGCCAGAGAACTG
GCTGAGAAAGAGAATGAACACAGAAATCGCTGTGATATGTTCAATGCGCAAGCGAGCGAGCTAATTTTTGCCCAA
AATAATAAGCATGGCTCATTGGACTGGGTCGTCTTGCACGACCTCAAGGCAAAGGAAGCGAAAGTTCACACGAAG
CGCGTTATCGAAGAGGCTCGTGCGAAAGGCATTATCAAAATATGCCTGGTTGTTGGTGAACAAAGTTCATCAGGT
GCGCTCAAGCCCGCTATGCTCAAATTTTTGAGAAAAAAGCGTGAGCTCTCAGTGGAAGTTAATCCTTTATATGCA
GGTGTACTGGTCGTTCAACTCGTTTCCATGAGTACTGAGTCTCCTCCTGCGGTTTGGGACCAAACGCTTTTGCAG
GCCCCCTTATCGCAGACAAGTCAACCGGCATCGAGTCCTATTGTTATTTCCCATATTGATGCGCCTCCTGATCGA
CTGACCGGTGATTCATCTCGAGGCCTTGCACAGAACTGTGAGGTCACATCGACACCTCTTGTTCCTGTTGGTGGT
GAAGAGCTGCCAGAAGTTCCCCAAATCGCAGCTCATCGTGATGCGAAAGATGGGAACACTGATTTTATGATGCTC
CGGGAATATGCAAGGCAAGAGAAACAAAAGCAGTTGAATTGCCGTATGGAGAAGAAGCGAGCCCGAGCCGGAGGC
CAGATGGCGCTTGCCATGGAACTGGCTAAGCAAGAGAATGAACATCAAATTCTCCGTGACCTGTACGACGCAACA
GCGAGCCAGCTAATTTTTTCCAAAAATAATGAGAACGGCTCCTTGGACAAGGTCGTCCTGCGCGACCTCAAGGAT
AAGGAAGCCATGACCCATGCAAGGCGTGTTATTCAAGAGGCTCGTGAGAAGGGCAAAACCGAGATATGCCTGGTT
AAAATAGTGTGGGCTCTCAGCGGAAAAGGACGCCAAAGATAA
Gene >AgabiH97|041050
ATGCTTGACATCATATTATGCTTGCTCCTGGTACTATGGCTGGTCGCTGAGGCTTTGAGCGATAAAAAGCCCAGA
TCCGAACGGTCACTTCTTCCTCAGCATCACGATGGTGTTCGTTACACTGCACCGCTACATAATGGGGAACAGCGA
TCAGTGAGCGAACATCAACGCCAGAGCACTCCTTCCTCAAGGGCGCTATATGTGCATCAAGGGCAAGAACGAATC
TCTCCTCCTCAACATCGTGACGGTGTACCAAACACTGTCCCCCAACAACGCCAGAGCGCTCCTATCGCAAGGGCG
CTGTATGTACACCAAGAGCAAGAACGAATCTCTCCTCCTCAACATCGCGACGGTGTAACAAACACCGTCCCCTTA
CAACGCCAGAGTGCTCCTCCGACAAGGGCGCTACGTGTACATCAAGAACACGAGCGAGTCTCTCCTCCTCGACAT
CGCGATGGTGTAACGAACGCTGTCCCAGATCAACGTCGGGATGTTCCTCAAAGGGGGCAATATGTACATCAGGAG
CAAGAGCGAATCTTTCTTTCCAATCTTCTTCGAGCTGTCCAGCTGGGGGCTCAAGGCTCGAGCGACGAATGTTCC
GGTTCCGAACCGCCACCCCTTCCTCAACCTCACGACAATGTCCGTTGCACTGCAACATTACATGATGTAGAGCAG
CGATCCGTAAGCGAACATCAATTGCAGAGCGCTCCTCCCCCAAGGGCGCAAAATGTACAGCATGAACGAGTCTCT
TCTCCAGAACCTCTTCAAGCTGTCCAGCTCTCCACTCCTGCAGTTCCTCAGGGACAGGATCAGACGCCTCTCCAA
ACTGCACCGCAGCATGTAAACGAACCGGAACAGAATTCTGTTCTTATTCCCCCGGCTACTGTGTCTCCCACCGAG
CCCAAACTAGAGGCAGCTCAGACCTATCAAGCTACAGAGGCAGCTCTTGCAACCGAAGCCGGGGGAGAAGTGCCC
CAGCACCCTCAAGTGAGCACACTCAGTCTCTTCCACAAAACAATGATTGTTAATCTTCGTCCAGGATGATGCGGA
TGAAGGAAGCGGTGACTATGACAGGCTCAGAGAACGTGCAAAGCAGGAGATAAAAGCGATACAGAAGTATCGCAA
AGAGAAGCAACAAGCCAAAGCCAGTGGTCAATTCAAGTTGGTCGCAGAACTTGCCGAAGAAATCAAGAAACACAG
ACAGCGCCGGCAATTATTCGATGAACAAGCCAGTCATTTGATCTTTGCGAGTAAGCGAACAATTATCCGTTGAAG
ATTAGAATACTGATACATGTCATTTCAGAAAATAACAAGGTTCGTTCAAAACTTGTATCATGACACTACGTGAAT
AACAAGTCCTTGTGGCAGAATCGCTCACCGAACCAGGTCGACTTACACGGCCTTACGGCAAAGGAAGCAACCACT
CACGCAAAGCGTGCAATTCAGGAGGCCCGTGAAAGAGGCGTCGTCCAATTGCGCCTCATCGTTGGCAAGGGACTT
CATTCATCAGGACCACCTGTACTCAAACCCTGCATGCTGAAGCTTATGCAAGAGTAAGCATCGTGATATCTACAA
ATCTAATCTTATTAACTGTGGTGTAGGCTTAAACTTCCTGCGGAAGTTCATCCTTCGAATGAAGGTGTACTAGTC
GTTCAAATCGTTCCTTCGAGTACTGCGTCTCCTCTGGCGACAGTTCATCAATCGGTTTTGCAGCCCTCCTTGTTA
ATCACAAGCCAACCGGAACCAAGTCCTCTTGTTCCTCATATTGATGCGTCTCCCGGCGAACCTGATCAATGGGCT
CACAATTTATCTCGAGAGCTTGTTTGGTATGGTCAAGAAATCTCACAGCGCTTCCAAGTAGGCATCCTTTACTGT
ATAAGAGGTGGTTCTCATTGACCGATCTTTCCCCCTAGAACTCAGCTCATCATAATGTGGAAGATGGAAATGGTG
ATGGTATCATACTTCGTGAATATGCAAGGCAAGAGAGACAAATGAAGTTGAATTACCGCAAGGAGAAAAAGCTAG
CCAAAGCCGGGGGTCAATTGGTGCTTGCCAGAGAACTGGCTGAGAAAGAGAATGAACACAGAAATCGCTGTGATA
TGTTCAATGCGCAAGCGAGCGAGCTAATTTTTGCCCGTACGTGCTTCTTTTTCCTTTTCTCTTGTCGAACGATTC
ATCACTGATAAAATTTTGATTCCGTCAGAAAATAATAAGGTTCGTTGGTATTCAATATCTGATCTTGACCCTGTG
TAACCACGAAAACCCGTGTCATAGCATGGCTCATTGGACTGGGTCGTCTTGCACGACCTCAAGGCAAAGGAAGCG
AAAGTTCACACGAAGCGCGTTATCGAAGAGGCTCGTGCGAAAGGCATTATCAAAATATGCCTGGTTGTTGGTGAA
CAAAGTTCATCAGGTGCGCTCAAGCCCGCTATGCTCAAATTTTTGAGAAAAAAGTAAGTGTTGTGATGCTTACGA
CTGCAATTTTTCATTTACCTTTTTACAGGCGTGAGCTCTCAGTGGAAGTTAATCCTTTATATGCAGGTGTACTGG
TCGTTCAACTCGTTTCCATGAGTACTGAGTCTCCTCCTGCGGTTTGGGACCAAACGCTTTTGCAGGCCCCCTTAT
CGCAGACAAGTCAACCGGCATCGAGTCCTATTGTTATTTCCCATATTGATGCGCCTCCTGATCGACTGACCGGTG
ATTCATCTCGAGGCCTTGCACAGAACTGTGAGGTCACATCGACACCTCTTGTTCCTGTTGGTGGTGAAGAGCTGC
CAGAAGTTCCCCAAGTGAGCATCCGCTTCTGCGTAAGGGCTTGTTCTCGTTGACCCTCCCTTTAGATCGCAGCTC
ATCGTGATGCGAAAGATGGGAACACTGATTTTATGATGCTCCGGGAATATGCAAGGCAAGAGAAACAAAAGCAGT
TGAATTGCCGTATGGAGAAGAAGCGAGCCCGAGCCGGAGGCCAGATGGCGCTTGCCATGGAACTGGCTAAGCAAG
AGAATGAACATCAAATTCTCCGTGACCTGTACGACGCAACAGCGAGCCAGCTAATTTTTTCCAGTACGTTCTTCT
TTTTCTCATGGAATGGTTCAACACTGATAGGTTTTTGTTTCGTCAGAAAATAATGAGGTTCGTTGGTATTCACGG
TCCGGTCATGATCCTGCGTCAACGAAAGTCTTTGTCATAGAACGGCTCCTTGGACAAGGTCGTCCTGCGCGACCT
CAAGGATAAGGAAGCCATGACCCATGCAAGGCGTGTTATTCAAGAGGCTCGTGAGAAGGGCAAAACCGAGATATG
CCTGGTTGTTGGTGGACTTTGTTCACCAAGTTTTATGCTCAAATTCCTAAGAAAATAGTGAGTGTTGTGATGCAT
ACAACTGCCATTTTTGATTTGGCTTTCATAGGTGTGGGCTCTCAGCGGAAAAGGACGCCAAAGATAA

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