Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabiH97|040580
Gene name
Locationscaffold_2:557250..557956
Strand-
Gene length (bp)706
Transcript length (bp)549
Coding sequence length (bp)549
Protein length (aa) 183

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 27 0.45

Transmembrane Domains

Domain # Start End Length
1 7 29 22
2 79 98 19
3 103 125 22
4 151 173 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Developmental stages of Agaricus bisporus (strain A15). Published in Pelkmans et al, Applied Microbiology and Biotechnology, 2016

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >AgabiH97|040580
MASPALPGVFFCFAAMVLLIFVSVSAPTWEAISFLNVGPEGHQVHYGVFGFTGSQRSIGYTFSNNSRLNTTVLHN
LTKVLILHPIVAGMSGLAFILGLSHARIGTVFMALVAGLAALVTFVVWVIDLVLFGIARHHFRDDGQLAQYGNAN
WLTLGALVALLLGFCVSACGMFGRYRKRRNVY*
Coding >AgabiH97|040580
ATGGCTTCACCCGCTCTACCAGGAGTGTTCTTTTGCTTTGCAGCAATGGTCCTTCTAATATTTGTTAGTGTATCT
GCTCCCACATGGGAGGCAATATCATTCTTGAATGTCGGCCCCGAAGGCCATCAAGTCCACTACGGTGTCTTTGGA
TTCACTGGTTCTCAGCGTTCGATAGGATATACCTTTAGTAACAACAGTCGGTTGAATACGACGGTTCTGCACAAT
CTTACCAAGGTATTGATTCTCCACCCAATTGTTGCCGGCATGTCAGGATTGGCATTCATTCTTGGCCTCTCCCAT
GCCCGTATCGGCACTGTGTTCATGGCCCTCGTCGCGGGTCTTGCTGCACTGGTAACGTTTGTCGTATGGGTCATT
GATTTAGTTCTCTTCGGTATCGCCCGCCACCACTTCCGCGATGATGGTCAGCTGGCGCAATATGGCAATGCCAAC
TGGCTTACTCTGGGTGCCCTTGTCGCCCTCTTGCTTGGCTTCTGTGTATCTGCTTGTGGCATGTTTGGGCGATAC
AGGAAACGGAGGAATGTGTATTGA
Transcript >AgabiH97|040580
ATGGCTTCACCCGCTCTACCAGGAGTGTTCTTTTGCTTTGCAGCAATGGTCCTTCTAATATTTGTTAGTGTATCT
GCTCCCACATGGGAGGCAATATCATTCTTGAATGTCGGCCCCGAAGGCCATCAAGTCCACTACGGTGTCTTTGGA
TTCACTGGTTCTCAGCGTTCGATAGGATATACCTTTAGTAACAACAGTCGGTTGAATACGACGGTTCTGCACAAT
CTTACCAAGGTATTGATTCTCCACCCAATTGTTGCCGGCATGTCAGGATTGGCATTCATTCTTGGCCTCTCCCAT
GCCCGTATCGGCACTGTGTTCATGGCCCTCGTCGCGGGTCTTGCTGCACTGGTAACGTTTGTCGTATGGGTCATT
GATTTAGTTCTCTTCGGTATCGCCCGCCACCACTTCCGCGATGATGGTCAGCTGGCGCAATATGGCAATGCCAAC
TGGCTTACTCTGGGTGCCCTTGTCGCCCTCTTGCTTGGCTTCTGTGTATCTGCTTGTGGCATGTTTGGGCGATAC
AGGAAACGGAGGAATGTGTATTGA
Gene >AgabiH97|040580
ATGGCTTCACCCGCTCTACCAGGAGTGTTCTTTTGCTTTGCAGCAATGGTCCTTCTAATATTTGTATGTTGATAC
ATTCCAAATCATCTCGATCTTAGTACCCATTGGATGATTTCCAGGTTAGTGTATCTGCTCCCACATGGGAGGCAA
TATCATTCTTGAATGTCGGCCCCGAAGGCCATCAAGTCCACTACGGTGTCTTTGGATTCACTGGTTCTCAGCGTT
CGATAGGATATACCTTTAGGTACTAGTTAATATTCTTATGAGATCGTCTTTCTAACATTTCATTAGTAACAACAG
TCGGTTGAATACGACGGTTCTGCACAATCTTACCAAGGTATTGATTCTCCACCCAATTGGTAAGTGCAGAATTGC
GTGGCCATGTTCTTCATTTCTAACTTACCCTCGCGCAGTTGCCGGCATGTCAGGATTGGCATTCATTCTTGGCCT
CTCCCATGCCCGTATCGGCACTGTGTTCATGGCCCTCGTCGCGGGTCTTGCTGCACTGGTAACGTTTGTCGTATG
GGTCATTGATTTAGTTCTCTTCGGTATCGCCCGCCACCACTTCCGCGATGATGGTCAGCTGGCGCAATATGGCAA
TGCCAACTGGCTTACTCTGGGTGCCCTTGTCGCCCTCTTGCTTGGCTTCTGTGTATCTGCTTGTGGCATGTTTGG
GCGATACAGGAAACGGAGGAATGTGTATTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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